MGE detailed information
MGE type: Prophage MGE length: 21714 bp
Accession: NZ_CP051652 Location: 1067702..1089415 Organism: Pectobacterium carotovorum strain WPP14 Replicon: chromosome
Accession: NZ_CP051652 Location: 1067702..1089415 Organism: Pectobacterium carotovorum strain WPP14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HER17_RS04690 () | 1064014..1064349 | - | 336 | WP_010306035.1 | 5-carboxymethyl-2-hydroxymuconate isomerase | - |
| HER17_RS04695 () | 1064532..1064906 | + | 375 | WP_029368810.1 | sigma factor-binding protein Crl | - |
| HER17_RS04700 () | 1065030..1066133 | + | 1104 | WP_010306028.1 | glutamate 5-kinase | - |
| HER17_RS04705 () | 1066144..1067397 | + | 1254 | WP_010306025.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HER17_RS04710 () | 1067702..1068121 | - | 420 | WP_010306020.1 | hypothetical protein | - |
| HER17_RS04720 () | 1068889..1070061 | + | 1173 | WP_010306015.1 | Prophage integrase IntS ; Integrase | Integrase |
| HER17_RS04725 () | 1070058..1072781 | + | 2724 | WP_010306011.1 | SIR2 family protein | - |
| HER17_RS04730 () | 1073105..1073338 | - | 234 | WP_180890108.1 | ogr/Delta-like zinc finger family protein | - |
| HER17_RS04735 () | 1073335..1074066 | - | 732 | WP_180890109.1 | hypothetical protein | - |
| HER17_RS04740 () | 1074437..1074622 | - | 186 | WP_010310841.1 | hypothetical protein | - |
| HER17_RS04745 () | 1074609..1074869 | + | 261 | WP_180890110.1 | AlpA family transcriptional regulator | - |
| HER17_RS04750 () | 1074866..1075090 | + | 225 | WP_180890111.1 | hypothetical protein | - |
| HER17_RS04755 () | 1075099..1075389 | + | 291 | Protein_926 | ash family protein | - |
| HER17_RS04760 () | 1075446..1075643 | + | 198 | WP_039488123.1 | host cell division inhibitor Icd-like protein | - |
| HER17_RS04765 () | 1075636..1075848 | + | 213 | WP_180890194.1 | hypothetical protein | - |
| HER17_RS04770 () | 1075859..1078186 | + | 2328 | WP_180890112.1 | toprim domain-containing protein | - |
| HER17_RS04775 () | 1078556..1078846 | + | 291 | WP_010308412.1 | hypothetical protein | - |
| HER17_RS04780 () | 1079138..1079485 | - | 348 | WP_004114521.1 | hypothetical protein | - |
| HER17_RS04785 () | 1079509..1079736 | - | 228 | WP_004114519.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HER17_RS04790 () | 1080367..1080900 | - | 534 | WP_139294543.1 | hypothetical protein | - |
| HER17_RS04795 () | 1081165..1082607 | + | 1443 | WP_049776292.1 | IS1182 family transposase ISCps6 | Transposase |
| HER17_RS04800 () | 1083080..1083331 | + | 252 | WP_005973616.1 | prevent-host-death protein | Antitoxin Detail |
| HER17_RS04805 () | 1083321..1083605 | + | 285 | WP_005973612.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HER17_RS04810 () | 1084024..1084214 | + | 191 | Protein_937 | recombinase | - |
| HER17_RS04815 () | 1085547..1086194 | - | 648 | WP_010308382.1 | EcsC family protein | - |
| HER17_RS04820 () | 1086617..1087102 | + | 486 | WP_180890113.1 | Major exported protein | VF |
| HER17_RS04825 () | 1087546..1088178 | - | 633 | WP_010303180.1 | hypothetical protein | - |
| HER17_RS04830 () | 1088510..1089415 | - | 906 | WP_010303178.1 | HTH-type transcriptional regulator PgrR | VF |
| HER17_RS04835 () | 1089775..1090803 | + | 1029 | WP_010303176.1 | alpha/beta hydrolase | - |
| HER17_RS04840 () | 1091740..1092243 | + | 504 | WP_010282535.1 | type VI secretion system contractile sheath small subunit | - |
| HER17_RS04845 () | 1092266..1093744 | + | 1479 | WP_010303163.1 | type VI secretion system contractile sheath large subunit | - |
| HER17_RS04850 () | 1093750..1094181 | + | 432 | WP_010303156.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|