MGE detailed information
MGE type: Genomic_island MGE length: 9928 bp
Accession: NZ_CP051460 Location: 2663953..2673880 Organism: Dickeya solani strain IFB0421 Replicon: chromosome
Accession: NZ_CP051460 Location: 2663953..2673880 Organism: Dickeya solani strain IFB0421 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HAT92_RS11720 () | 2659094..2659489 | + | 396 | WP_023637835.1 | cupin domain-containing protein | - |
| HAT92_RS11725 () | 2659645..2660679 | - | 1035 | WP_022633732.1 | harpin HrpZ family protein | - |
| HAT92_RS11730 () | 2660840..2661250 | - | 411 | WP_022633733.1 | hypothetical protein | - |
| HAT92_RS11735 () | 2661247..2661435 | - | 189 | WP_022633734.1 | hypothetical protein | - |
| HAT92_RS11740 () | 2661470..2663539 | - | 2070 | WP_023637836.1 | type III secretion system outer membrane ring subunit SctC | - |
| HAT92_RS11745 () | 2663532..2663966 | - | 435 | WP_022633737.1 | hypothetical protein | - |
| HAT92_RS11750 () | 2663953..2664180 | - | 228 | WP_022633738.1 | type III secretion protein HrpF | - |
| HAT92_RS11755 () | 2664465..2664863 | - | 399 | WP_026594479.1 | type II toxin-antitoxin system YafO family toxin | Toxin Detail |
| HAT92_RS11760 () | 2664866..2665159 | - | 294 | WP_022633740.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HAT92_RS11765 () | 2665377..2666426 | - | 1050 | WP_022633741.1 | hypothetical protein | - |
| HAT92_RS11770 () | 2666966..2668126 | + | 1161 | WP_022633742.1 | alpha/beta fold hydrolase | - |
| HAT92_RS11775 () | 2668137..2669450 | - | 1314 | WP_022633743.1 | lytic murein transglycosylase | - |
| HAT92_RS11780 () | 2669712..2670314 | - | 603 | WP_022633745.1 | type III secretion system stator protein SctL | - |
| HAT92_RS11785 () | 2670443..2671036 | - | 594 | WP_023637837.1 | hypothetical protein | - |
| HAT92_RS11790 () | 2671039..2671821 | - | 783 | WP_023637838.1 | Yop proteins translocation lipoprotein J | VF |
| HAT92_RS11795 () | 2671908..2672273 | - | 366 | WP_022633748.1 | EscI/YscI/HrpB family type III secretion system inner rod protein | - |
| HAT92_RS11800 () | 2672354..2672560 | - | 207 | WP_033111884.1 | hypothetical protein | - |
| HAT92_RS11805 () | 2672726..2673708 | - | 983 | Protein_2315 | C4-dicarboxylate transport transcriptional regulatory protein DctD | VF |
| HAT92_RS11810 () | 2674151..2674792 | - | 642 | WP_022633751.1 | response regulator transcription factor | - |
| HAT92_RS11815 () | 2674826..2676292 | - | 1467 | WP_022633752.1 | PAS domain S-box protein | - |
| HAT92_RS11820 () | 2676558..2677112 | - | 555 | WP_022633753.1 | RNA polymerase sigma factor | - |
| HAT92_RS11825 () | 2677435..2678604 | + | 1170 | WP_022633754.1 | type III secretion system gatekeeper subunit SctW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|