MGE detailed information
MGE type: Genomic_island MGE length: 9929 bp
Accession: NZ_CP051458 Location: 2649202..2659130 Organism: Dickeya solani strain IFB0231 Replicon: chromosome
Accession: NZ_CP051458 Location: 2649202..2659130 Organism: Dickeya solani strain IFB0231 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HAT89_RS11635 () | 2644343..2644738 | + | 396 | WP_023637835.1 | cupin domain-containing protein | - |
| HAT89_RS11640 () | 2644894..2645928 | - | 1035 | WP_022633732.1 | harpin HrpZ family protein | - |
| HAT89_RS11645 () | 2646089..2646499 | - | 411 | WP_022633733.1 | hypothetical protein | - |
| HAT89_RS11650 () | 2646496..2646684 | - | 189 | WP_022633734.1 | hypothetical protein | - |
| HAT89_RS11655 () | 2646719..2648788 | - | 2070 | WP_023637836.1 | type III secretion system outer membrane ring subunit SctC | - |
| HAT89_RS11660 () | 2648781..2649215 | - | 435 | WP_022633737.1 | hypothetical protein | - |
| HAT89_RS11665 () | 2649202..2649429 | - | 228 | WP_022633738.1 | type III secretion protein HrpF | - |
| HAT89_RS11670 () | 2649714..2650112 | - | 399 | WP_026594479.1 | type II toxin-antitoxin system YafO family toxin | Toxin Detail |
| HAT89_RS11675 () | 2650115..2650408 | - | 294 | WP_022633740.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HAT89_RS11680 () | 2650626..2651675 | - | 1050 | WP_022633741.1 | hypothetical protein | - |
| HAT89_RS11685 () | 2652215..2653375 | + | 1161 | WP_022633742.1 | alpha/beta fold hydrolase | - |
| HAT89_RS11690 () | 2653386..2654699 | - | 1314 | WP_022633743.1 | lytic murein transglycosylase | - |
| HAT89_RS11695 () | 2654961..2655563 | - | 603 | WP_022633745.1 | type III secretion system stator protein SctL | - |
| HAT89_RS11700 () | 2655692..2656285 | - | 594 | WP_023637837.1 | hypothetical protein | - |
| HAT89_RS11705 () | 2656288..2657070 | - | 783 | WP_023637838.1 | Yop proteins translocation lipoprotein J | VF |
| HAT89_RS11710 () | 2657157..2657522 | - | 366 | WP_022633748.1 | EscI/YscI/HrpB family type III secretion system inner rod protein | - |
| HAT89_RS11715 () | 2657603..2657809 | - | 207 | WP_033111884.1 | hypothetical protein | - |
| HAT89_RS11720 () | 2657975..2658958 | - | 984 | WP_022633749.1 | C4-dicarboxylate transport transcriptional regulatory protein DctD | VF |
| HAT89_RS11725 () | 2659401..2660042 | - | 642 | WP_022633751.1 | response regulator transcription factor | - |
| HAT89_RS11730 () | 2660076..2661542 | - | 1467 | WP_022633752.1 | PAS domain S-box protein | - |
| HAT89_RS11735 () | 2661808..2662362 | - | 555 | WP_022633753.1 | RNA polymerase sigma factor | - |
| HAT89_RS11740 () | 2662685..2663854 | + | 1170 | WP_022633754.1 | type III secretion system gatekeeper subunit SctW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|