MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48379 bp
Accession: NZ_CP051458 Location: 1873279..1921657 Organism: Dickeya solani strain IFB0231 Replicon: chromosome
Accession: NZ_CP051458 Location: 1873279..1921657 Organism: Dickeya solani strain IFB0231 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HAT89_RS08300 () | 1868565..1869239 | + | 675 | WP_022633092.1 | glutathione S-transferase family protein | - |
| HAT89_RS08305 () | 1869651..1870526 | - | 876 | WP_026594453.1 | alpha/beta hydrolase | - |
| HAT89_RS08310 () | 1870441..1871658 | - | 1218 | WP_022633094.1 | dienelactone hydrolase family protein | - |
| HAT89_RS08315 () | 1872060..1872347 | - | 288 | WP_146053333.1 | hypothetical protein | - |
| HAT89_RS08320 () | 1873810..1874874 | + | 1065 | WP_026594454.1 | DNA cytosine methyltransferase | - |
| HAT89_RS08325 () | 1874837..1877836 | + | 3000 | WP_080644163.1 | ATP-binding protein | - |
| HAT89_RS08330 () | 1877838..1879487 | + | 1650 | WP_022633097.1 | hypothetical protein | - |
| HAT89_RS08335 () | 1879848..1880249 | - | 402 | WP_023637748.1 | hypothetical protein | - |
| HAT89_RS08340 () | 1880313..1880606 | - | 294 | WP_146053334.1 | hypothetical protein | - |
| HAT89_RS08345 () | 1880997..1881941 | + | 945 | WP_022633099.1 | DUF1738 domain-containing protein | - |
| HAT89_RS08350 () | 1882262..1882498 | + | 237 | WP_022633100.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| HAT89_RS08355 () | 1882501..1882815 | + | 315 | WP_022633101.1 | CcdB family protein | Toxin Detail |
| HAT89_RS08360 () | 1882812..1883069 | - | 258 | WP_022633102.1 | hypothetical protein | - |
| HAT89_RS08365 () | 1883245..1884552 | - | 1308 | WP_022633103.1 | type II toxin-antitoxin system HipA family toxin | - |
| HAT89_RS08370 () | 1884552..1884959 | - | 408 | WP_071598628.1 | helix-turn-helix transcriptional regulator | - |
| HAT89_RS08375 () | 1885342..1886088 | - | 747 | WP_022633104.1 | hypothetical protein | - |
| HAT89_RS08380 () | 1886097..1887860 | - | 1764 | Protein_1635 | type IV secretory system conjugative DNA transfer family protein | - |
| HAT89_RS08385 () | 1888557..1888859 | - | 303 | WP_022633106.1 | KikA | - |
| HAT89_RS08390 () | 1888900..1889916 | - | 1017 | WP_022633107.1 | Type IV secretion system protein VirB11 | VF |
| HAT89_RS08395 () | 1889906..1891114 | - | 1209 | Protein_1638 | Type IV secretion system protein PtlG | VF |
| HAT89_RS08400 () | 1891111..1892001 | - | 891 | WP_022633110.1 | P-type conjugative transfer protein VirB9 | - |
| HAT89_RS08405 () | 1892001..1892684 | - | 684 | WP_022633111.1 | Type IV secretion system protein PtlE | VF |
| HAT89_RS08410 () | 1892905..1893933 | - | 1029 | WP_022633112.1 | type IV secretion system protein | - |
| HAT89_RS08415 () | 1893945..1894169 | - | 225 | WP_022633113.1 | EexN family lipoprotein | - |
| HAT89_RS08420 () | 1894181..1894897 | - | 717 | WP_022633114.1 | type IV secretion system protein | - |
| HAT89_RS08425 () | 1894923..1897670 | - | 2748 | WP_022633115.1 | Type IV secretion system protein virB4 | VF |
| HAT89_RS08430 () | 1897680..1897955 | - | 276 | WP_012769221.1 | hypothetical protein | VF |
| HAT89_RS08435 () | 1897975..1898622 | - | 648 | WP_022633116.1 | Type IV secretion system protein virB1 | VF |
| HAT89_RS08440 () | 1898692..1898925 | - | 234 | WP_022633117.1 | hypothetical protein | - |
| HAT89_RS08445 () | 1899491..1900006 | - | 516 | WP_022633118.1 | NAD(P)H-dependent oxidoreductase | - |
| HAT89_RS08450 () | 1900026..1900991 | - | 966 | WP_022633119.1 | aldo/keto reductase | - |
| HAT89_RS08455 () | 1901051..1901917 | - | 867 | WP_022633120.1 | SMP-30/gluconolactonase/LRE family protein | - |
| HAT89_RS08460 () | 1902000..1902473 | - | 474 | WP_022633121.1 | DMT family transporter | - |
| HAT89_RS08465 () | 1902485..1903882 | - | 1398 | WP_022633122.1 | amidohydrolase family protein | - |
| HAT89_RS08470 () | 1904014..1904898 | + | 885 | WP_022633123.1 | HTH-type transcriptional regulator PgrR | VF |
| HAT89_RS08475 () | 1905162..1905371 | - | 210 | WP_022633124.1 | TraR/DksA family transcriptional regulator | - |
| HAT89_RS08480 () | 1905361..1905945 | - | 585 | WP_022633125.1 | DUF2857 domain-containing protein | - |
| HAT89_RS08485 () | 1905962..1906156 | - | 195 | WP_022633126.1 | AlpA family transcriptional regulator | - |
| HAT89_RS08490 () | 1906832..1907089 | - | 258 | WP_012769229.1 | helix-turn-helix domain-containing protein | - |
| HAT89_RS08495 () | 1907203..1907481 | - | 279 | WP_012884168.1 | HTH-type transcriptional regulator Xre | VF |
| HAT89_RS08500 () | 1907615..1907902 | + | 288 | WP_022633127.1 | helix-turn-helix domain-containing protein | - |
| HAT89_RS08505 () | 1908180..1908425 | - | 246 | WP_013318575.1 | helix-turn-helix transcriptional regulator | - |
| HAT89_RS08510 () | 1909109..1909627 | + | 519 | WP_022633128.1 | Major exported protein | VF |
| HAT89_RS08515 () | 1909740..1911602 | + | 1863 | WP_022633129.1 | Actin cross-linking toxin VgrG1 | VF |
| HAT89_RS08520 () | 1911680..1912120 | + | 441 | WP_023637755.1 | DUF1795 domain-containing protein | - |
| HAT89_RS08525 () | 1912138..1915968 | + | 3831 | Protein_1664 | PAAR domain-containing protein | - |
| HAT89_RS08530 () | 1916337..1917182 | + | 846 | WP_023637756.1 | hypothetical protein | - |
| HAT89_RS08535 () | 1917481..1917627 | + | 147 | WP_155246175.1 | hypothetical protein | - |
| HAT89_RS08540 () | 1917789..1918715 | - | 927 | WP_022633133.1 | hypothetical protein | - |
| HAT89_RS08545 () | 1919731..1920042 | + | 312 | WP_022633134.1 | DUF736 domain-containing protein | - |
| HAT89_RS08550 () | 1920198..1921480 | - | 1283 | Protein_1669 | Prophage integrase IntA ; Integrase | Integrase |
| HAT89_RS08560 () | 1921827..1922618 | - | 792 | WP_022633137.1 | DgsA anti-repressor MtfA | - |
| HAT89_RS08570 () | 1923481..1924632 | - | 1152 | WP_022633138.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| HAT89_RS08575 () | 1924666..1925055 | - | 390 | WP_023637758.1 | helix-turn-helix domain-containing protein | - |
| HAT89_RS08580 () | 1925483..1925650 | + | 168 | WP_022633139.1 | YqaE/Pmp3 family membrane protein | - |
| HAT89_RS08585 () | 1925723..1926277 | - | 555 | WP_022633140.1 | flavodoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|