MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 45814 bp
Accession: NZ_CP051432 Location: 1..45814 Organism: Escherichia sp. SCLE84 Replicon: plasmid pSCLE2
Accession: NZ_CP051432 Location: 1..45814 Organism: Escherichia sp. SCLE84 Replicon: plasmid pSCLE2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HGD79_RS25460 () | 612..1061 | + | 450 | WP_001282381.1 | H-NS histone family protein | - |
| HGD79_RS25465 () | 1124..1528 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| HGD79_RS25470 () | 1723..2427 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HGD79_RS25475 () | 2452..2685 | + | 234 | WP_000624775.1 | hypothetical protein | - |
| HGD79_RS25480 () | 3301..3636 | - | 336 | WP_000046891.1 | thermonuclease family protein | - |
| HGD79_RS25485 () | 3879..4442 | + | 564 | WP_001515734.1 | IS66 family transposase ISPpu13 | Transposase |
| HGD79_RS25490 () | 4507..4881 | + | 375 | WP_001348195.1 | cupin domain-containing protein | - |
| HGD79_RS25495 () | 4974..5678 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HGD79_RS25500 () | 5780..6994 | + | 1215 | WP_001532073.1 | type II site-specific deoxyribonuclease | - |
| HGD79_RS25505 () | 7028..8431 | - | 1404 | WP_072135327.1 | DNA cytosine methyltransferase | - |
| HGD79_RS25510 () | 8555..8827 | + | 273 | Protein_11 | IS1 family transposase | - |
| HGD79_RS25515 () | 8909..9613 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HGD79_RS25520 () | 9668..9937 | - | 270 | Protein_13 | restriction endonuclease | - |
| HGD79_RS25525 () | 10000..10704 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HGD79_RS25530 () | 10759..11028 | - | 270 | Protein_15 | restriction endonuclease | - |
| HGD79_RS25535 () | 11091..11795 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HGD79_RS25540 () | 11801..11941 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| HGD79_RS25545 () | 12427..13164 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HGD79_RS25550 () | 13161..13385 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| HGD79_RS25555 () | 13596..15089 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| HGD79_RS26400 () | 15558..16004 | + | 447 | Protein_21 | DUF3363 domain-containing protein | - |
| HGD79_RS25565 () | 16221..17435 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| HGD79_RS25570 () | 17463..17768 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HGD79_RS25575 () | 17880..18068 | + | 189 | Protein_24 | IS91 family transposase | - |
| HGD79_RS25585 () | 18424..19068 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HGD79_RS25590 () | 19354..19974 | + | 621 | WP_000864791.1 | ParA family protein | - |
| HGD79_RS25595 () | 20026..20256 | + | 231 | WP_000051064.1 | partitioning protein | - |
| HGD79_RS25600 () | 20272..20565 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| HGD79_RS25605 () | 20567..21535 | + | 969 | WP_077783213.1 | IS5 family transposase IS903B | Transposase |
| HGD79_RS25610 () | 21595..22017 | - | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| HGD79_RS25615 () | 22085..22531 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| HGD79_RS25620 () | 22571..23407 | - | 837 | WP_001050931.1 | replication initiation protein | - |
| HGD79_RS25625 () | 24663..24914 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HGD79_RS25630 () | 24904..25185 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HGD79_RS25635 () | 25331..25654 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| HGD79_RS25640 () | 25699..25944 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| HGD79_RS25645 () | 25934..26149 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| HGD79_RS25650 () | 26242..26571 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| HGD79_RS25655 () | 26858..27007 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| HGD79_RS25660 () | 27020..27292 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| HGD79_RS25665 () | 27619..28164 | + | 546 | WP_025755763.1 | hypothetical protein | - |
| HGD79_RS25670 () | 28167..29324 | + | 1158 | WP_000538023.1 | hypothetical protein | - |
| HGD79_RS25675 () | 29685..30176 | + | 492 | WP_000872475.1 | transcription termination factor NusG | - |
| HGD79_RS25680 () | 30401..31045 | + | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| HGD79_RS25685 () | 31029..31319 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| HGD79_RS25690 () | 31343..34102 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| HGD79_RS25695 () | 34104..34841 | + | 738 | WP_000737859.1 | pilus assembly protein | - |
| HGD79_RS25700 () | 34851..35111 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| HGD79_RS25705 () | 35123..36178 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| HGD79_RS25710 () | 36368..37090 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| HGD79_RS25715 () | 37096..38025 | + | 930 | WP_025755764.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HGD79_RS25720 () | 38022..39236 | + | 1215 | WP_025755765.1 | Type IV secretion system protein virB10 | VF |
| HGD79_RS25725 () | 39254..40291 | + | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| HGD79_RS25730 () | 40296..42131 | + | 1836 | WP_168848546.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HGD79_RS25735 () | 42128..42523 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| HGD79_RS25740 () | 42649..42858 | + | 210 | WP_024256774.1 | hypothetical protein | - |
| HGD79_RS25745 () | 42941..43411 | + | 471 | WP_025755767.1 | thermonuclease family protein | - |
| HGD79_RS25750 () | 43826..44071 | + | 246 | WP_001243650.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|