MGE detailed information
MGE type: Prophage MGE length: 60652 bp
Accession: NZ_CP051430 Location: 599082..659733 Organism: Escherichia sp. SCLE84 Replicon: chromosome
Accession: NZ_CP051430 Location: 599082..659733 Organism: Escherichia sp. SCLE84 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HGD79_RS03115 () | 594981..596201 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| HGD79_RS03120 () | 596326..597021 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| HGD79_RS03125 () | 596974..598266 | - | 1293 | WP_168848286.1 | voltage-gated ClC-type chloride channel ClcB | - |
| HGD79_RS03130 () | 598425..599039 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| HGD79_RS03135 () | 599082..599936 | - | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit | - |
| HGD79_RS03140 () | 599938..600555 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| HGD79_RS03145 () | 600566..602989 | - | 2424 | WP_001342196.1 | dimethyl sulfoxide reductase subunit A | - |
| HGD79_RS03150 () | 603050..605476 | - | 2427 | WP_050940319.1 | dimethyl sulfoxide reductase subunit A | - |
| HGD79_RS03155 () | 605675..605980 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| HGD79_RS03160 () | 606088..606798 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HGD79_RS03165 () | 606801..607361 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HGD79_RS03170 () | 607396..607737 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HGD79_RS03175 () | 607872..608198 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| HGD79_RS03180 () | 608404..609618 | + | 1215 | WP_168848287.1 | starvation-sensing protein RspA | - |
| HGD79_RS03185 () | 609630..610649 | + | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| HGD79_RS03190 () | 610707..610835 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| HGD79_RS03195 () | 610837..612117 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HGD79_RS03200 () | 612152..612403 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| HGD79_RS03205 () | 612476..614947 | - | 2472 | WP_021511903.1 | exonuclease | - |
| HGD79_RS03210 () | 615041..615232 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| HGD79_RS03215 () | 615229..615417 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HGD79_RS03225 () | 615985..616203 | - | 219 | WP_168848288.1 | hypothetical protein | - |
| HGD79_RS03230 () | 616363..616518 | - | 156 | WP_000379578.1 | DUF1391 family protein | - |
| HGD79_RS03235 () | 616687..617094 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| HGD79_RS03240 () | 617175..617402 | + | 228 | WP_168848289.1 | transcriptional regulator | - |
| HGD79_RS03245 () | 617386..617907 | + | 522 | WP_168848290.1 | hypothetical protein | - |
| HGD79_RS03250 () | 617888..618853 | + | 966 | WP_000054509.1 | hypothetical protein | - |
| HGD79_RS03255 () | 618894..619316 | + | 423 | WP_168848291.1 | DUF977 family protein | - |
| HGD79_RS03260 () | 619313..619669 | + | 357 | WP_001374839.1 | class I SAM-dependent methyltransferase | - |
| HGD79_RS26340 () | 620280..620567 | + | 288 | Protein_642 | hypothetical protein | - |
| HGD79_RS03270 () | 621336..622677 | + | 1342 | Protein_643 | ISNCY family transposase ISCARN112 | Transposase |
| HGD79_RS03275 () | 623114..623446 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| HGD79_RS03280 () | 623649..623954 | - | 306 | WP_168848292.1 | hypothetical protein | - |
| HGD79_RS03285 () | 623979..624218 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HGD79_RS03290 () | 624218..624505 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HGD79_RS03295 () | 624577..624732 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HGD79_RS03300 () | 624949..625200 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| HGD79_RS03305 () | 625267..625545 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| HGD79_RS03310 () | 625547..626596 | + | 1050 | WP_168848293.1 | DUF968 domain-containing protein | - |
| HGD79_RS03315 () | 626610..627362 | + | 753 | WP_001047135.1 | antitermination protein | - |
| HGD79_RS03320 () | 627640..627729 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| HGD79_RS03325 () | 627784..627996 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HGD79_RS03330 () | 628297..628512 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HGD79_RS03335 () | 629266..629481 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HGD79_RS03340 () | 629486..629797 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| HGD79_RS03345 () | 629794..630327 | + | 534 | WP_001092971.1 | lysozyme | - |
| HGD79_RS03350 () | 630324..630821 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HGD79_RS03355 () | 631185..631397 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HGD79_RS03360 () | 631408..631596 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| HGD79_RS03365 () | 631599..631664 | + | 66 | WP_168848530.1 | hypothetical protein | - |
| HGD79_RS03370 () | 631744..631899 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| HGD79_RS03375 () | 632071..632244 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HGD79_RS03380 () | 632396..632806 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HGD79_RS03385 () | 632864..633097 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HGD79_RS03390 () | 633486..634031 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| HGD79_RS03395 () | 634006..635931 | + | 1926 | WP_053879349.1 | phage terminase large subunit family protein | - |
| HGD79_RS03400 () | 635928..636134 | + | 207 | WP_000198149.1 | gpW family protein | - |
| HGD79_RS03405 () | 636131..637732 | + | 1602 | WP_001349645.1 | phage portal protein | - |
| HGD79_RS03410 () | 637713..639032 | + | 1320 | WP_000123317.1 | S49 family peptidase | - |
| HGD79_RS03415 () | 639042..639374 | + | 333 | WP_168848294.1 | head decoration protein | - |
| HGD79_RS03420 () | 639430..640455 | + | 1026 | WP_000063254.1 | major capsid protein | - |
| HGD79_RS03425 () | 640495..640893 | + | 399 | WP_000158854.1 | DNA-packaging protein FI | - |
| HGD79_RS03430 () | 640905..641258 | + | 354 | WP_000752996.1 | head-tail joining protein | - |
| HGD79_RS03435 () | 641270..641848 | + | 579 | WP_000975111.1 | phage tail protein | - |
| HGD79_RS03440 () | 641845..642240 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| HGD79_RS03445 () | 642248..642988 | + | 741 | WP_001360166.1 | phage tail protein | - |
| HGD79_RS03450 () | 643004..643426 | + | 423 | WP_000479206.1 | phage minor tail protein G | - |
| HGD79_RS03455 () | 643408..643842 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| HGD79_RS03460 () | 643835..646414 | + | 2580 | WP_168848295.1 | phage tail tape measure protein | - |
| HGD79_RS03465 () | 646411..646740 | + | 330 | WP_000847331.1 | phage tail protein | - |
| HGD79_RS03470 () | 646740..647438 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| HGD79_RS03475 () | 647444..648187 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| HGD79_RS03480 () | 648124..648756 | + | 633 | WP_168848296.1 | tail assembly protein | - |
| HGD79_RS03485 () | 648817..652215 | + | 3399 | WP_168848297.1 | host specificity protein J | - |
| HGD79_RS03490 () | 652282..652881 | + | 600 | WP_001230359.1 | Outer membrane protein X | VF |
| HGD79_RS03495 () | 652946..656251 | + | 3306 | WP_168848298.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HGD79_RS03500 () | 656303..656425 | + | 123 | Protein_689 | tail fiber assembly protein | - |
| HGD79_RS03505 () | 656523..657113 | - | 591 | WP_168848299.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HGD79_RS03510 () | 657430..657663 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HGD79_RS03515 () | 657732..657845 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| HGD79_RS03520 () | 658366..659733 | + | 1368 | Protein_693 | MHS family MFS transporter | - |
| HGD79_RS03525 () | 659822..661282 | + | 1461 | WP_000527781.1 | mannitol dehydrogenase family protein | - |
| HGD79_RS03530 () | 661318..661521 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HGD79_RS03535 () | 661699..662385 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| HGD79_RS03540 () | 662474..663220 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|