MGE detailed information
MGE type: Genomic_island MGE length: 12735 bp
Accession: NZ_CP051430 Location: 3887989..3900723 Organism: Escherichia sp. SCLE84 Replicon: chromosome
Accession: NZ_CP051430 Location: 3887989..3900723 Organism: Escherichia sp. SCLE84 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HGD79_RS18845 () | 3882990..3883424 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| HGD79_RS18850 () | 3883442..3884320 | - | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| HGD79_RS18855 () | 3884310..3885089 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| HGD79_RS18860 () | 3885100..3885573 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HGD79_RS18865 () | 3885596..3886876 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HGD79_RS18870 () | 3887125..3887934 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HGD79_RS18875 () | 3887989..3888453 | - | 465 | WP_000347279.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HGD79_RS18880 () | 3888453..3888788 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HGD79_RS18885 () | 3888937..3890508 | - | 1572 | WP_024243610.1 | galactarate dehydratase | - |
| HGD79_RS18890 () | 3890883..3892217 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HGD79_RS18895 () | 3892233..3893003 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HGD79_RS18900 () | 3893033..3893923 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HGD79_RS18905 () | 3894020..3895165 | + | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| HGD79_RS18915 () | 3895930..3896910 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| HGD79_RS18920 () | 3897248..3898435 | - | 1188 | WP_000484546.1 | YhaC family protein | - |
| HGD79_RS18925 () | 3898457..3898996 | - | 540 | WP_000675745.1 | hypothetical protein | - |
| HGD79_RS18930 () | 3899252..3899596 | - | 345 | WP_000145836.1 | transcriptional activator TdcR | - |
| HGD79_RS18935 () | 3899785..3900723 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HGD79_RS18940 () | 3900822..3901811 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HGD79_RS18945 () | 3901833..3903164 | + | 1332 | WP_168848472.1 | threonine/serine transporter TdcC | - |
| HGD79_RS18950 () | 3903190..3904398 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|