MGE detailed information
MGE type: Genomic_island MGE length: 40219 bp
Accession: NZ_CP051430 Location: 1153431..1193649 Organism: Escherichia sp. SCLE84 Replicon: chromosome
Accession: NZ_CP051430 Location: 1153431..1193649 Organism: Escherichia sp. SCLE84 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HGD79_RS05850 () | 1149783..1150940 | + | 1158 | WP_168848327.1 | glucans biosynthesis protein MdoC | - |
| HGD79_RS05855 () | 1150948..1152429 | - | 1482 | WP_168848328.1 | cardiolipin synthase ClsC | - |
| HGD79_RS05860 () | 1152371..1152904 | - | 534 | WP_168848329.1 | O-acetyl-ADP-ribose deacetylase | - |
| HGD79_RS05865 () | 1152999..1153310 | - | 312 | WP_000489590.1 | type 1 fimbrial protein | - |
| HGD79_RS05870 () | 1153431..1153763 | - | 333 | WP_000992834.1 | Curli assembly protein CsgC | VF |
| HGD79_RS05875 () | 1153822..1154277 | - | 456 | WP_000771437.1 | Major curlin subunit | VF |
| HGD79_RS05880 () | 1154318..1154773 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| HGD79_RS05885 () | 1155527..1156177 | + | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| HGD79_RS05890 () | 1156182..1156571 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| HGD79_RS05895 () | 1156596..1157012 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| HGD79_RS05900 () | 1157039..1157872 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| HGD79_RS05905 () | 1157936..1158427 | - | 492 | WP_001297187.1 | DUF1097 domain-containing protein | - |
| HGD79_RS05910 () | 1158529..1159083 | - | 555 | WP_001001902.1 | molecular chaperone YcdY | - |
| HGD79_RS05915 () | 1159107..1159844 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| HGD79_RS05920 () | 1159899..1160837 | - | 939 | WP_096147332.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| HGD79_RS05930 () | 1161308..1162150 | - | 843 | WP_065304417.1 | DUF4942 domain-containing protein | - |
| HGD79_RS05935 () | 1162247..1162444 | - | 198 | WP_086598277.1 | DUF957 domain-containing protein | - |
| HGD79_RS05940 () | 1162490..1162669 | - | 180 | Protein_1174 | hypothetical protein | - |
| HGD79_RS05945 () | 1162666..1163043 | - | 378 | WP_065304416.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| HGD79_RS05950 () | 1163133..1163501 | - | 369 | WP_001285390.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HGD79_RS05955 () | 1163551..1164195 | - | 645 | WP_065304415.1 | antitoxin of toxin-antitoxin stability system | - |
| HGD79_RS05960 () | 1164210..1164431 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| HGD79_RS05965 () | 1164500..1164976 | - | 477 | WP_001186747.1 | RadC family protein | - |
| HGD79_RS05970 () | 1164991..1165476 | - | 486 | WP_000214317.1 | antirestriction protein | - |
| HGD79_RS05975 () | 1165567..1166388 | - | 822 | WP_106668205.1 | DUF945 domain-containing protein | - |
| HGD79_RS05980 () | 1166609..1167019 | - | 411 | WP_000846713.1 | hypothetical protein | - |
| HGD79_RS05985 () | 1167035..1167712 | - | 678 | WP_059239983.1 | hypothetical protein | - |
| HGD79_RS05990 () | 1167848..1168918 | - | 1071 | WP_059239982.1 | patatin-like phospholipase family protein | - |
| HGD79_RS05995 () | 1168915..1169820 | - | 906 | WP_048943270.1 | chemotaxis protein | - |
| HGD79_RS06000 () | 1169817..1172213 | - | 2397 | WP_059239980.1 | dynamin family protein | - |
| HGD79_RS06005 () | 1172431..1173303 | - | 873 | WP_059239978.1 | GTPase family protein | - |
| HGD79_RS06010 () | 1173567..1175123 | + | 1557 | WP_059239976.1 | type I restriction-modification system subunit M | - |
| HGD79_RS06015 () | 1175120..1176325 | + | 1206 | WP_059239974.1 | restriction endonuclease subunit S | - |
| HGD79_RS06020 () | 1176447..1179563 | + | 3117 | WP_168848330.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HGD79_RS06025 () | 1179724..1180421 | - | 698 | Protein_1191 | IS1 family transposase IS1R | Transposase |
| HGD79_RS06030 () | 1180478..1180879 | - | 402 | Protein_1192 | IS30 family transposase IS30D | Transposase |
| HGD79_RS06035 () | 1180944..1181840 | + | 897 | Protein_1193 | IS3 family transposase ISEhe3 | Transposase |
| HGD79_RS06040 () | 1182118..1183215 | - | 1098 | WP_059252017.1 | porin | - |
| HGD79_RS06045 () | 1183524..1184504 | - | 981 | WP_065304412.1 | IS5 family transposase ISKpn26 | Transposase |
| HGD79_RS06050 () | 1184754..1185167 | + | 414 | Protein_1196 | gluconate permease | - |
| HGD79_RS06055 () | 1185217..1185912 | - | 696 | WP_065304411.1 | lactate utilization protein C | - |
| HGD79_RS06060 () | 1185905..1187332 | - | 1428 | WP_050019109.1 | iron-sulfur cluster-binding protein | - |
| HGD79_RS06065 () | 1187343..1188062 | - | 720 | WP_001102105.1 | (Fe-S)-binding protein | - |
| HGD79_RS06070 () | 1188137..1189834 | - | 1698 | WP_000683099.1 | D-lactate dehydrogenase | - |
| HGD79_RS06075 () | 1190265..1191818 | + | 1554 | WP_000545263.1 | L-lactate permease | - |
| HGD79_RS06080 () | 1192248..1192556 | - | 309 | Protein_1202 | IS3 family transposase ISLad1 | Transposase |
| HGD79_RS06085 () | 1192573..1193649 | - | 1077 | WP_000227970.1 | IS110 family transposase ISEc21 | Transposase |
| HGD79_RS06090 () | 1193892..1194056 | - | 165 | Protein_1204 | IS3 family transposase | - |
| HGD79_RS06095 () | 1194191..1195699 | - | 1509 | Protein_1205 | group II intron reverse transcriptase/maturase | - |
| HGD79_RS06100 () | 1196372..1197111 | - | 740 | Protein_1206 | IS3 family transposase | - |
| HGD79_RS06105 () | 1197167..1197958 | + | 792 | Protein_1207 | IS256-like element IS1414 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|