MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 57420 bp
Accession: NZ_CP051424 Location: 1..57420 Organism: Salmonella enterica subsp. enterica serovar Uganda strain CVM 20723 Replicon: plasmid p20723-3
Accession: NZ_CP051424 Location: 1..57420 Organism: Salmonella enterica subsp. enterica serovar Uganda strain CVM 20723 Replicon: plasmid p20723-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ25_RS00590 () | 713..1219 | + | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| HFQ25_RS00595 () | 1212..1406 | + | 195 | WP_001127358.1 | DUF1187 family protein | - |
| HFQ25_RS00600 () | 1452..2405 | + | 954 | WP_072097371.1 | SPFH/Band 7/PHB domain protein | - |
| HFQ25_RS00605 () | 2467..2910 | + | 444 | WP_000498521.1 | NfeD family protein | - |
| HFQ25_RS00610 () | 2914..3084 | + | 171 | WP_000550721.1 | hypothetical protein | - |
| HFQ25_RS00615 () | 3095..3757 | + | 663 | WP_001243159.1 | hypothetical protein | - |
| HFQ25_RS00620 () | 3908..4501 | + | 594 | WP_001243171.1 | hypothetical protein | - |
| HFQ25_RS00625 () | 4715..5017 | + | 303 | WP_000189499.1 | hypothetical protein | - |
| HFQ25_RS00630 () | 5014..5271 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| HFQ25_RS00635 () | 5275..6270 | + | 996 | WP_000276068.1 | type IV secretion system protein | - |
| HFQ25_RS00640 () | 6276..6917 | + | 642 | WP_001415805.1 | conjugal transfer protein TrbJ | - |
| HFQ25_RS00645 () | 6920..7174 | + | 255 | WP_000609210.1 | EexN family lipoprotein | - |
| HFQ25_RS00650 () | 7227..8036 | - | 810 | WP_001005154.1 | hypothetical protein | - |
| HFQ25_RS00655 () | 8084..8719 | + | 636 | WP_000835769.1 | hypothetical protein | - |
| HFQ25_RS00660 () | 8891..9178 | + | 288 | WP_001326593.1 | killer family protein | - |
| HFQ25_RS00665 () | 9181..10416 | + | 1236 | WP_000733393.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| HFQ25_RS00670 () | 10422..10859 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| HFQ25_RS00675 () | 10978..11376 | + | 399 | WP_001153669.1 | hypothetical protein | - |
| HFQ25_RS00680 () | 11397..11981 | + | 585 | WP_001177114.1 | lytic transglycosylase domain-containing protein | - |
| HFQ25_RS00685 () | 11981..12271 | + | 291 | WP_000865478.1 | hypothetical protein | - |
| HFQ25_RS00690 () | 12342..12662 | + | 321 | WP_000362083.1 | VirB3 family type IV secretion system protein | - |
| HFQ25_RS00695 () | 12668..15025 | + | 2358 | WP_000548951.1 | VirB4 family type IV secretion system protein | - |
| HFQ25_RS00700 () | 15057..15191 | + | 135 | WP_000701233.1 | hypothetical protein | - |
| HFQ25_RS00705 () | 15191..15925 | + | 735 | WP_000432283.1 | type IV secretion system protein | - |
| HFQ25_RS00710 () | 15991..16692 | + | 702 | WP_000274524.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HFQ25_RS00715 () | 16682..17821 | + | 1140 | WP_000790639.1 | TrbI/VirB10 family protein | - |
| HFQ25_RS00720 () | 17896..18951 | + | 1056 | WP_001059977.1 | P-type DNA transfer ATPase VirB11 | - |
| HFQ25_RS00725 () | 18967..20925 | + | 1959 | WP_000338972.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HFQ25_RS00730 () | 20976..22619 | + | 1644 | WP_001035589.1 | PilN family type IVB pilus formation outer membrane protein | - |
| HFQ25_RS00735 () | 22658..23980 | + | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| HFQ25_RS00740 () | 23964..24458 | + | 495 | WP_000912554.1 | type IV pilus biogenesis protein PilP | - |
| HFQ25_RS00745 () | 24483..26021 | + | 1539 | WP_000466225.1 | Flp pilus assembly complex ATPase component TadA | - |
| HFQ25_RS00750 () | 26012..27121 | + | 1110 | WP_000974903.1 | type II secretion system F family protein | - |
| HFQ25_RS00755 () | 27166..27723 | + | 558 | WP_000095048.1 | hypothetical protein | - |
| HFQ25_RS00760 () | 27790..28272 | + | 483 | WP_001258095.1 | lytic transglycosylase domain-containing protein | - |
| HFQ25_RS00765 () | 28276..28911 | + | 636 | WP_000934978.1 | A24 family peptidase | - |
| HFQ25_RS00770 () | 28924..30300 | + | 1377 | WP_000750519.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFQ25_RS00775 () | 30297..30506 | - | 210 | WP_001444223.1 | hypothetical protein | - |
| HFQ25_RS00780 () | 30581..31705 | + | 1125 | WP_000486720.1 | site-specific integrase | - |
| HFQ25_RS00785 () | 31717..32370 | + | 654 | WP_000572549.1 | hypothetical protein | - |
| HFQ25_RS00790 () | 32417..32935 | + | 519 | WP_000698245.1 | thermonuclease family protein | - |
| HFQ25_RS00795 () | 32951..33355 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| HFQ25_RS00800 () | 33736..34011 | + | 276 | WP_000109867.1 | hypothetical protein | - |
| HFQ25_RS00805 () | 34037..34624 | + | 588 | WP_000280685.1 | hypothetical protein | - |
| HFQ25_RS00810 () | 34649..35224 | + | 576 | WP_001198964.1 | hypothetical protein | - |
| HFQ25_RS00815 () | 35229..37385 | + | 2157 | WP_000765170.1 | type IA DNA topoisomerase | - |
| HFQ25_RS00820 () | 37419..37841 | + | 423 | WP_000939694.1 | hypothetical protein | - |
| HFQ25_RS00825 () | 37866..38186 | + | 321 | WP_000668719.1 | hypothetical protein | - |
| HFQ25_RS00830 () | 38305..38511 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| HFQ25_RS00835 () | 38792..39031 | + | 240 | WP_000957667.1 | hypothetical protein | - |
| HFQ25_RS00840 () | 39083..39523 | + | 441 | WP_000666081.1 | hypothetical protein | - |
| HFQ25_RS00845 () | 39566..43753 | - | 4188 | WP_000637167.1 | hypothetical protein | - |
| HFQ25_RS00850 () | 43750..44091 | - | 342 | WP_000730722.1 | plasmid mobilization relaxosome protein MobC | - |
| HFQ25_RS00855 () | 44421..44900 | + | 480 | WP_001058980.1 | hypothetical protein | - |
| HFQ25_RS00860 () | 44906..45607 | + | 702 | WP_000280995.1 | hypothetical protein | - |
| HFQ25_RS00865 () | 45654..46253 | + | 600 | WP_000091422.1 | hypothetical protein | - |
| HFQ25_RS00870 () | 46273..46599 | + | 327 | WP_000206697.1 | hypothetical protein | - |
| HFQ25_RS00875 () | 46730..47167 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HFQ25_RS00880 () | 47192..47374 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| HFQ25_RS00885 () | 47908..48090 | + | 183 | WP_001481829.1 | hypothetical protein | - |
| HFQ25_RS00890 () | 48197..48463 | - | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HFQ25_RS00895 () | 48883..49161 | - | 279 | WP_000545937.1 | hypothetical protein | - |
| HFQ25_RS00900 () | 49711..49962 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| HFQ25_RS00905 () | 49952..50212 | - | 261 | WP_000702246.1 | hypothetical protein | Toxin Detail |
| HFQ25_RS00910 () | 50263..50487 | - | 225 | WP_000814384.1 | hypothetical protein | - |
| HFQ25_RS00915 () | 50585..50794 | - | 210 | WP_000866037.1 | hypothetical protein | - |
| HFQ25_RS00920 () | 50836..51159 | - | 324 | WP_000427402.1 | hypothetical protein | - |
| HFQ25_RS00925 () | 51740..52069 | - | 330 | WP_000855118.1 | hypothetical protein | - |
| HFQ25_RS00930 () | 52667..53332 | + | 666 | WP_000532148.1 | P-loop NTPase | - |
| HFQ25_RS00935 () | 53411..53695 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| HFQ25_RS00940 () | 53713..54309 | - | 597 | WP_000125165.1 | hypothetical protein | - |
| HFQ25_RS00945 () | 54459..54620 | - | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| HFQ25_RS00950 () | 56029..57057 | - | 1029 | WP_199275337.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|