MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 83778 bp
Accession: NZ_CP051420 Location: 1..83778 Organism: Salmonella enterica subsp. enterica serovar Uganda strain CVM 20723 Replicon: plasmid p20723-2
Accession: NZ_CP051420 Location: 1..83778 Organism: Salmonella enterica subsp. enterica serovar Uganda strain CVM 20723 Replicon: plasmid p20723-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ25_RS00035 () | 21..368 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HFQ25_RS00040 () | 365..1057 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| HFQ25_RS00045 () | 1068..2051 | + | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| HFQ25_RS00050 () | 2054..3343 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| HFQ25_RS00055 () | 3343..4047 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HFQ25_RS00060 () | 4047..4574 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HFQ25_RS00065 () | 4625..5029 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| HFQ25_RS00070 () | 5093..5281 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HFQ25_RS00075 () | 5265..6065 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HFQ25_RS00080 () | 6155..9199 | + | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| HFQ25_RS00085 () | 9199..9813 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| HFQ25_RS00090 () | 9780..10982 | + | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| HFQ25_RS00095 () | 11011..11595 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| HFQ25_RS00100 () | 11692..13860 | + | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| HFQ25_RS00105 () | 13936..14550 | + | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HFQ25_RS00110 () | 14648..14857 | + | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| HFQ25_RS00115 () | 15066..15242 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| HFQ25_RS00120 () | 16166..16417 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| HFQ25_RS00125 () | 16489..16641 | - | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| HFQ25_RS00130 () | 16933..18141 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| HFQ25_RS00135 () | 18160..19230 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HFQ25_RS00140 () | 19223..21514 | + | 2292 | WP_199275336.1 | conjugal transfer protein TrbC | - |
| HFQ25_RS00145 () | 21551..24250 | - | 2700 | WP_006855641.1 | IncI1-type relaxase NikB | - |
| HFQ25_RS00150 () | 24261..24593 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HFQ25_RS00155 () | 24827..25162 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HFQ25_RS00160 () | 25248..26096 | - | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| HFQ25_RS00165 () | 26445..26642 | + | 198 | WP_001161112.1 | hypothetical protein | - |
| HFQ25_RS00170 () | 26676..26927 | + | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| HFQ25_RS00175 () | 26958..27203 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| HFQ25_RS00180 () | 27203..28117 | - | 915 | WP_000038334.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HFQ25_RS00185 () | 28182..28448 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| HFQ25_RS00190 () | 28541..28975 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| HFQ25_RS00195 () | 29704..30204 | - | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| HFQ25_RS00200 () | 30667..31263 | - | 597 | WP_000978005.1 | hypothetical protein | - |
| HFQ25_RS00205 () | 31260..31979 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| HFQ25_RS00210 () | 31976..32410 | - | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| HFQ25_RS00215 () | 32465..34423 | - | 1959 | WP_001145471.1 | ParB/RepB/Spo0J family partition protein | - |
| HFQ25_RS00220 () | 34482..34715 | - | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| HFQ25_RS00225 () | 34773..35300 | - | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| HFQ25_RS00230 () | 36071..36262 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| HFQ25_RS00235 () | 36259..36681 | - | 423 | WP_000271741.1 | DUF1380 family protein | - |
| HFQ25_RS00240 () | 36728..37153 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| HFQ25_RS00245 () | 37570..38340 | - | 771 | WP_001434682.1 | hypothetical protein | - |
| HFQ25_RS00250 () | 38391..38825 | - | 435 | WP_000274472.1 | DUF1380 family protein | - |
| HFQ25_RS00255 () | 38838..39059 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| HFQ25_RS00260 () | 39060..39743 | - | 684 | WP_021513974.1 | DNA methylase | - |
| HFQ25_RS00265 () | 39819..40124 | - | 306 | WP_015058890.1 | hypothetical protein | - |
| HFQ25_RS00270 () | 40128..41030 | - | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| HFQ25_RS00275 () | 41448..41696 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| HFQ25_RS00280 () | 41693..42130 | + | 438 | WP_039720033.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HFQ25_RS00285 () | 42130..43404 | + | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HFQ25_RS00290 () | 43406..43822 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HFQ25_RS00295 () | 43815..44795 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HFQ25_RS00300 () | 45209..45517 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| HFQ25_RS00305 () | 45604..46248 | - | 645 | WP_001144036.1 | ParA family protein | - |
| HFQ25_RS00310 () | 46428..47207 | - | 780 | WP_001164198.1 | site-specific integrase | - |
| HFQ25_RS00315 () | 47209..47589 | - | 381 | WP_000465035.1 | hypothetical protein | - |
| HFQ25_RS00320 () | 48158..48412 | + | 255 | WP_000343106.1 | hypothetical protein | - |
| HFQ25_RS00325 () | 48412..49002 | + | 591 | WP_053289960.1 | hypothetical protein | - |
| HFQ25_RS00330 () | 49215..50267 | + | 1053 | WP_000655519.1 | hypothetical protein | - |
| HFQ25_RS00335 () | 50443..51045 | + | 603 | WP_000521606.1 | hypothetical protein | - |
| HFQ25_RS00340 () | 51101..51595 | + | 495 | WP_015058884.1 | hypothetical protein | - |
| HFQ25_RS00345 () | 51595..51861 | + | 267 | WP_000627832.1 | hypothetical protein | - |
| HFQ25_RS00350 () | 52053..52334 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| HFQ25_RS00355 () | 52440..52715 | - | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFQ25_RS00360 () | 52715..52999 | - | 285 | WP_001178087.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| HFQ25_RS00365 () | 53903..54934 | - | 1032 | WP_000907852.1 | replication initiation protein | - |
| HFQ25_RS00370 () | 55907..56170 | + | 264 | WP_001324596.1 | ash family protein | - |
| HFQ25_RS00375 () | 56088..56375 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HFQ25_RS00380 () | 56817..57350 | + | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| HFQ25_RS00385 () | 57604..58287 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| HFQ25_RS00390 () | 58460..59011 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| HFQ25_RS00395 () | 59173..59427 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HFQ25_RS00400 () | 59603..59899 | + | 297 | WP_000494779.1 | hypothetical protein | - |
| HFQ25_RS00405 () | 60523..61590 | + | 1068 | WP_001302629.1 | type IV pilus biogenesis lipoprotein PilL | - |
| HFQ25_RS00410 () | 61590..62027 | + | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| HFQ25_RS00415 () | 62041..63723 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| HFQ25_RS00420 () | 63716..65011 | + | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| HFQ25_RS00425 () | 64998..65450 | + | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| HFQ25_RS00430 () | 65461..67014 | + | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| HFQ25_RS00435 () | 67027..68124 | + | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| HFQ25_RS00440 () | 68142..68756 | + | 615 | WP_000959786.1 | pilus assembly protein PilX | - |
| HFQ25_RS00445 () | 68766..69326 | + | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| HFQ25_RS00450 () | 69311..69967 | + | 657 | WP_001389386.1 | prepilin peptidase | - |
| HFQ25_RS00455 () | 69967..71391 | + | 1425 | WP_001389385.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFQ25_RS00460 () | 71388..71585 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| HFQ25_RS00465 () | 71886..72213 | - | 328 | Protein_87 | hypothetical protein | - |
| HFQ25_RS00470 () | 72197..73351 | + | 1155 | WP_001139958.1 | integrase | - |
| HFQ25_RS00475 () | 73502..74326 | + | 825 | WP_001238927.1 | hypothetical protein | - |
| HFQ25_RS00480 () | 74412..75614 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| HFQ25_RS00485 () | 75674..76258 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HFQ25_RS00490 () | 76653..77111 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HFQ25_RS00495 () | 77108..77926 | + | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| HFQ25_RS00500 () | 77923..79071 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| HFQ25_RS00505 () | 79068..79358 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| HFQ25_RS00510 () | 79373..79924 | + | 552 | WP_000014584.1 | phospholipase D family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|