MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122954 bp
Accession: NZ_CP051373 Location: 1..122954 Organism: Salmonella enterica subsp. enterica serovar Newport strain CVM 24374 Replicon: plasmid p20723-2
Accession: NZ_CP051373 Location: 1..122954 Organism: Salmonella enterica subsp. enterica serovar Newport strain CVM 24374 Replicon: plasmid p20723-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFS12_RS22485 () | 178..1319 | - | 1142 | Protein_0 | CMY-2 family class C beta-lactamase | - |
| HFS12_RS22490 () | 1643..1951 | - | 309 | Protein_1 | IS1380 family transposase | - |
| HFS12_RS22495 () | 2138..3400 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| HFS12_RS22500 () | 3724..4869 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| HFS12_RS22505 () | 4963..5496 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| HFS12_RS22510 () | 5493..5810 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFS12_RS22515 () | 6538..12024 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| HFS12_RS22520 () | 12173..12880 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| HFS12_RS22525 () | 12877..13578 | + | 702 | Protein_8 | conjugal transfer protein TraC | - |
| HFS12_RS22530 () | 13578..14537 | - | 960 | Protein_9 | IS1380-like element ISEc9 family transposase | - |
| HFS12_RS22535 () | 14822..15214 | - | 393 | WP_000479535.1 | hypothetical protein | - |
| HFS12_RS22540 () | 15218..15796 | - | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HFS12_RS22545 () | 15793..17106 | - | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| HFS12_RS22550 () | 17106..18023 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| HFS12_RS22555 () | 18007..18633 | - | 627 | WP_001049717.1 | hypothetical protein | - |
| HFS12_RS22560 () | 18630..18911 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| HFS12_RS22565 () | 19056..19433 | - | 378 | WP_001326174.1 | hypothetical protein | - |
| HFS12_RS22570 () | 19757..20419 | - | 663 | WP_001231464.1 | hypothetical protein | - |
| HFS12_RS22575 () | 20419..20796 | - | 378 | WP_000869297.1 | hypothetical protein | - |
| HFS12_RS22580 () | 20806..21252 | - | 447 | WP_000122507.1 | hypothetical protein | - |
| HFS12_RS22585 () | 21262..21891 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| HFS12_RS22590 () | 21848..22432 | - | 585 | WP_000332868.1 | hypothetical protein | - |
| HFS12_RS22595 () | 22443..24308 | - | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| HFS12_RS22600 () | 24305..27277 | - | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| HFS12_RS22605 () | 27445..28062 | + | 618 | WP_001249395.1 | hypothetical protein | - |
| HFS12_RS22610 () | 28044..28277 | + | 234 | WP_001191890.1 | hypothetical protein | - |
| HFS12_RS22615 () | 28277..30469 | + | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| HFS12_RS22620 () | 30484..30972 | + | 489 | WP_000467110.1 | hypothetical protein | - |
| HFS12_RS22625 () | 31063..31362 | - | 300 | WP_001326171.1 | hypothetical protein | - |
| HFS12_RS22630 () | 31574..32191 | - | 618 | WP_000464630.1 | hypothetical protein | - |
| HFS12_RS22635 () | 32247..32903 | - | 657 | WP_000268552.1 | hypothetical protein | - |
| HFS12_RS22640 () | 32903..34330 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| HFS12_RS22645 () | 34334..34834 | - | 501 | WP_000647188.1 | hypothetical protein | - |
| HFS12_RS22650 () | 34843..35154 | - | 312 | WP_001447539.1 | hypothetical protein | - |
| HFS12_RS22655 () | 35160..35591 | - | 432 | WP_001326170.1 | hypothetical protein | - |
| HFS12_RS22660 () | 35659..36333 | - | 675 | WP_000344149.1 | hypothetical protein | - |
| HFS12_RS22665 () | 36308..36589 | - | 282 | WP_000044823.1 | hypothetical protein | - |
| HFS12_RS22670 () | 36582..36959 | - | 378 | WP_001125904.1 | hypothetical protein | - |
| HFS12_RS22675 () | 37286..37429 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| HFS12_RS22680 () | 37521..38156 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| HFS12_RS22685 () | 38209..38481 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| HFS12_RS22690 () | 38530..39711 | - | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| HFS12_RS22695 () | 39715..40500 | - | 786 | WP_001151304.1 | ParA family protein | - |
| HFS12_RS22700 () | 40674..40985 | - | 312 | WP_000338945.1 | hypothetical protein | - |
| HFS12_RS22705 () | 41292..42107 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| HFS12_RS22710 () | 42168..42971 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| HFS12_RS22715 () | 42971..43807 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| HFS12_RS22720 () | 44113..44355 | + | 243 | WP_000844627.1 | transposase | - |
| HFS12_RS22725 () | 44387..45037 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HFS12_RS22730 () | 45143..46342 | + | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| HFS12_RS22735 () | 46309..46497 | - | 189 | Protein_50 | IS91 family transposase | - |
| HFS12_RS22740 () | 46609..46914 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| HFS12_RS22745 () | 46942..48156 | - | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| HFS12_RS22750 () | 48373..48819 | - | 447 | Protein_53 | DUF3363 domain-containing protein | - |
| HFS12_RS22755 () | 49288..50781 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| HFS12_RS22760 () | 50992..51216 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| HFS12_RS22765 () | 51213..51950 | - | 738 | WP_001366550.1 | recombinase family protein | - |
| HFS12_RS22770 () | 52436..52576 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| HFS12_RS22775 () | 52582..53286 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HFS12_RS22780 () | 53593..53772 | + | 180 | Protein_59 | helix-turn-helix transcriptional regulator | - |
| HFS12_RS22785 () | 53837..54541 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HFS12_RS22790 () | 54756..55253 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| HFS12_RS22795 () | 55256..55744 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| HFS12_RS22800 () | 55841..56176 | + | 336 | WP_000683476.1 | hypothetical protein | - |
| HFS12_RS22805 () | 56191..56661 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| HFS12_RS22810 () | 56654..57025 | - | 372 | WP_000516916.1 | hypothetical protein | - |
| HFS12_RS22815 () | 57036..57230 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| HFS12_RS22820 () | 57571..58119 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| HFS12_RS22825 () | 58282..58632 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFS12_RS22830 () | 58637..58939 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| HFS12_RS22835 () | 58966..59259 | - | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| HFS12_RS22840 () | 59347..59619 | - | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| HFS12_RS22845 () | 59677..60204 | - | 528 | WP_001236377.1 | thermonuclease family protein | - |
| HFS12_RS22850 () | 60435..61292 | - | 858 | WP_001167032.1 | hypothetical protein | - |
| HFS12_RS22855 () | 61279..61509 | - | 231 | WP_000972663.1 | hypothetical protein | - |
| HFS12_RS22860 () | 61509..62027 | - | 519 | WP_000210756.1 | nitrite reductase | - |
| HFS12_RS22865 () | 62024..62470 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| HFS12_RS22870 () | 62470..62829 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| HFS12_RS22875 () | 62886..63314 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| HFS12_RS22880 () | 63348..64208 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| HFS12_RS22885 () | 64224..65183 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| HFS12_RS22890 () | 65183..66037 | - | 855 | WP_000539392.1 | hypothetical protein | - |
| HFS12_RS22895 () | 66042..66335 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| HFS12_RS22900 () | 66346..66819 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| HFS12_RS22905 () | 66916..67437 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| HFS12_RS22910 () | 67440..67961 | - | 522 | WP_000393785.1 | hypothetical protein | - |
| HFS12_RS22915 () | 67966..68574 | - | 609 | WP_000849071.1 | hypothetical protein | - |
| HFS12_RS22920 () | 68843..69958 | + | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| HFS12_RS22925 () | 69976..70410 | + | 435 | WP_000883925.1 | hypothetical protein | - |
| HFS12_RS22930 () | 71447..72547 | - | 1101 | WP_000350011.1 | plasmid replication protein | - |
| HFS12_RS22935 () | 72532..72819 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| HFS12_RS22940 () | 72824..73363 | - | 540 | WP_001447712.1 | hypothetical protein | - |
| HFS12_RS22945 () | 73862..74845 | + | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| HFS12_RS22950 () | 74862..75155 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| HFS12_RS22955 () | 75157..75576 | + | 420 | WP_000651490.1 | H-NS histone family protein | - |
| HFS12_RS22960 () | 75636..76186 | - | 551 | Protein_95 | regulator | - |
| HFS12_RS22965 () | 76183..76791 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| HFS12_RS22970 () | 76802..77335 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| HFS12_RS22975 () | 77335..77607 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| HFS12_RS22980 () | 78323..78685 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| HFS12_RS22985 () | 78723..82337 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HFS12_RS22990 () | 82350..83783 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| HFS12_RS22995 () | 83785..84825 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| HFS12_RS23000 () | 84936..86447 | - | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| HFS12_RS23005 () | 86734..87774 | - | 1041 | WP_000101568.1 | DNA-binding protein | - |
| HFS12_RS23010 () | 87936..88811 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| HFS12_RS23015 () | 89138..89629 | - | 492 | WP_000139717.1 | hypothetical protein | - |
| HFS12_RS23020 () | 89626..90495 | - | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| HFS12_RS23025 () | 90500..91510 | - | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| HFS12_RS23030 () | 91513..92049 | - | 537 | WP_000949433.1 | hypothetical protein | - |
| HFS12_RS23035 () | 92348..92629 | - | 282 | WP_000575657.1 | hypothetical protein | - |
| HFS12_RS23040 () | 92899..93501 | + | 603 | WP_000278322.1 | hypothetical protein | - |
| HFS12_RS23045 () | 93517..93969 | - | 453 | Protein_112 | hypothetical protein | - |
| HFS12_RS23050 () | 94140..94580 | - | 441 | WP_001326394.1 | hypothetical protein | - |
| HFS12_RS23055 () | 94552..98805 | - | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| HFS12_RS23060 () | 98938..99663 | - | 726 | WP_000988731.1 | hypothetical protein | - |
| HFS12_RS23065 () | 99777..100151 | - | 375 | WP_000868820.1 | hypothetical protein | - |
| HFS12_RS23070 () | 100272..100388 | - | 117 | WP_000338626.1 | hypothetical protein | - |
| HFS12_RS23075 () | 100398..100517 | - | 120 | Protein_118 | permease | - |
| HFS12_RS23080 () | 100794..101798 | - | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| HFS12_RS23085 () | 101898..102332 | - | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| HFS12_RS23090 () | 102404..102754 | + | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| HFS12_RS23095 () | 102770..103045 | + | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| HFS12_RS23100 () | 103117..104802 | + | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| HFS12_RS23105 () | 104817..105455 | + | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| HFS12_RS23110 () | 105567..105932 | + | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| HFS12_RS23115 () | 105929..106165 | + | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| HFS12_RS23120 () | 106162..107151 | + | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| HFS12_RS23125 () | 107361..108065 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| HFS12_RS23130 () | 108128..108832 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HFS12_RS23135 () | 108886..109245 | - | 360 | Protein_130 | conjugal transfer protein TraW | - |
| HFS12_RS23140 () | 109208..109738 | - | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| HFS12_RS23145 () | 109735..110052 | - | 318 | WP_000351984.1 | hypothetical protein | - |
| HFS12_RS23150 () | 110067..112514 | - | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| HFS12_RS23155 () | 112511..113218 | - | 708 | WP_001259346.1 | DsbC family protein | - |
| HFS12_RS23160 () | 113367..118853 | - | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| HFS12_RS23165 () | 119581..119898 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFS12_RS23170 () | 119895..120428 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| HFS12_RS23175 () | 120522..121667 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| HFS12_RS23180 () | 121996..122298 | - | 303 | Protein_139 | transposase | - |
| HFS12_RS23185 () | 122485..122954 | + | 470 | Protein_140 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|