MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 107602 bp
Accession: NZ_CP051364 Location: 1..107602 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 28321-b Replicon: plasmid p28321b-2
Accession: NZ_CP051364 Location: 1..107602 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 28321-b Replicon: plasmid p28321b-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFS62_RS23755 () | 1..975 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| HFS62_RS23760 () | 1057..2331 | - | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| HFS62_RS23765 () | 2331..2753 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HFS62_RS23770 () | 3264..3734 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| HFS62_RS23775 () | 3727..4083 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| HFS62_RS23780 () | 4465..5145 | + | 681 | WP_000088645.1 | DNA methylase | - |
| HFS62_RS23785 () | 5145..5366 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| HFS62_RS23790 () | 5422..5835 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| HFS62_RS23795 () | 5907..6671 | + | 765 | WP_001246548.1 | membrane protein | - |
| HFS62_RS23800 () | 7167..7601 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| HFS62_RS23805 () | 7668..8102 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| HFS62_RS23810 () | 8338..8661 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| HFS62_RS23815 () | 8625..8882 | + | 258 | WP_126834987.1 | hypothetical protein | - |
| HFS62_RS23820 () | 9476..9994 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| HFS62_RS23825 () | 10049..10291 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| HFS62_RS23830 () | 10360..12357 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| HFS62_RS23835 () | 12397..12831 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| HFS62_RS23840 () | 12828..13565 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| HFS62_RS23845 () | 13814..13972 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| HFS62_RS23850 () | 14075..14893 | + | 819 | Protein_20 | DUF945 domain-containing protein | - |
| HFS62_RS23855 () | 15204..15674 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| HFS62_RS23860 () | 16089..16469 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| HFS62_RS23865 () | 16662..17348 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| HFS62_RS23870 () | 17443..17670 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| HFS62_RS23875 () | 17712..18074 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| HFS62_RS23880 () | 18089..18400 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| HFS62_RS23885 () | 18422..18988 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| HFS62_RS23890 () | 18975..19715 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| HFS62_RS23895 () | 19715..21136 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| HFS62_RS23900 () | 21126..21722 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| HFS62_RS23905 () | 21700..21945 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| HFS62_RS23910 () | 21942..22457 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HFS62_RS23915 () | 22592..22813 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| HFS62_RS23920 () | 22806..23273 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| HFS62_RS23925 () | 23390..23653 | + | 264 | WP_001239256.1 | hypothetical protein | - |
| HFS62_RS23930 () | 23669..26317 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| HFS62_RS23935 () | 26292..26678 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| HFS62_RS23940 () | 26675..27307 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| HFS62_RS23945 () | 27304..28296 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| HFS62_RS23950 () | 28315..28623 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| HFS62_RS23955 () | 28608..29246 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HFS62_RS23960 () | 29283..29702 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| HFS62_RS23965 () | 29699..31525 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HFS62_RS23970 () | 31536..31751 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| HFS62_RS23975 () | 31763..32512 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HFS62_RS23980 () | 32726..33019 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HFS62_RS23985 () | 33006..33554 | + | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HFS62_RS23990 () | 33544..34926 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| HFS62_RS23995 () | 34923..37745 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HFS62_RS24000 () | 37761..38255 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| HFS62_RS24005 () | 38291..39022 | + | 732 | WP_022743186.1 | complement resistance protein TraT | - |
| HFS62_RS24010 () | 39399..41660 | + | 2262 | WP_022743189.1 | type IV conjugative transfer system coupling protein TraD | - |
| HFS62_RS24015 () | 41669..42067 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HFS62_RS24020 () | 42067..42294 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HFS62_RS24025 () | 42376..47634 | + | 5259 | WP_022743192.1 | conjugative transfer relaxase/helicase TraI | - |
| HFS62_RS24030 () | 47654..48394 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| HFS62_RS24035 () | 48449..49012 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| HFS62_RS24040 () | 49127..49411 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| HFS62_RS24045 () | 49424..49579 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| HFS62_RS24050 () | 49745..50187 | + | 443 | Protein_60 | phospholipase | - |
| HFS62_RS24055 () | 50366..50632 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| HFS62_RS24060 () | 50882..50959 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| HFS62_RS24065 () | 50940..51821 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| HFS62_RS24070 () | 52681..52902 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| HFS62_RS24075 () | 52999..53757 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| HFS62_RS24080 () | 54024..54581 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| HFS62_RS24085 () | 54671..54811 | - | 141 | WP_000052148.1 | SdiA-regulated domain-containing protein | - |
| HFS62_RS24090 () | 54832..55218 | + | 387 | Protein_68 | conjugal transfer protein TraD | - |
| HFS62_RS24095 () | 55227..55625 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HFS62_RS24100 () | 55625..55852 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HFS62_RS24105 () | 55934..61191 | + | 5258 | Protein_71 | conjugative transfer relaxase/helicase TraI | - |
| HFS62_RS24110 () | 61211..61951 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| HFS62_RS24115 () | 62006..62569 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| HFS62_RS24120 () | 62684..62968 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| HFS62_RS24125 () | 62981..63136 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| HFS62_RS24130 () | 63302..63744 | + | 443 | Protein_76 | phospholipase | - |
| HFS62_RS24135 () | 63923..64189 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| HFS62_RS24140 () | 64439..64516 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| HFS62_RS24145 () | 64497..65378 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| HFS62_RS24150 () | 66238..66459 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| HFS62_RS24155 () | 66556..67314 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| HFS62_RS24160 () | 67581..68138 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| HFS62_RS24165 () | 68228..69127 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| HFS62_RS24170 () | 69124..69270 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| HFS62_RS24175 () | 69260..69913 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| HFS62_RS24180 () | 70158..70508 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| HFS62_RS24185 () | 70493..70705 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| HFS62_RS24190 () | 71137..72012 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| HFS62_RS24195 () | 72265..72822 | - | 558 | WP_010999940.1 | membrane protein | - |
| HFS62_RS24200 () | 72837..73529 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| HFS62_RS24205 () | 73522..75930 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| HFS62_RS24210 () | 76158..76676 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| HFS62_RS24215 () | 76951..77253 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| HFS62_RS24220 () | 77972..78353 | + | 382 | Protein_94 | YgiW/YdeI family stress tolerance OB fold protein | - |
| HFS62_RS24225 () | 78522..78966 | + | 445 | Protein_95 | site-specific integrase | - |
| HFS62_RS24230 () | 79225..80214 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| HFS62_RS24235 () | 80708..81004 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| HFS62_RS24240 () | 81488..82009 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| HFS62_RS24245 () | 82685..82903 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HFS62_RS24250 () | 82905..83210 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HFS62_RS24255 () | 83212..83502 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| HFS62_RS24260 () | 83499..84020 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| HFS62_RS24265 () | 84055..84837 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| HFS62_RS24270 () | 84846..85559 | + | 714 | Protein_104 | EAL domain-containing protein | - |
| HFS62_RS24275 () | 85563..86072 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| HFS62_RS24280 () | 86066..86551 | + | 486 | WP_000905606.1 | membrane protein | - |
| HFS62_RS24285 () | 86828..87115 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| HFS62_RS24290 () | 87271..87831 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| HFS62_RS24295 () | 87898..88248 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| HFS62_RS24300 () | 88305..88729 | + | 425 | Protein_110 | IS200/IS605 family transposase | - |
| HFS62_RS24305 () | 88856..89506 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| HFS62_RS24310 () | 89767..90492 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| HFS62_RS24315 () | 90773..92548 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| HFS62_RS24320 () | 92600..92767 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| HFS62_RS24325 () | 92730..93497 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| HFS62_RS24330 () | 93671..93835 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| HFS62_RS24335 () | 94009..94902 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| HFS62_RS24340 () | 95511..96548 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| HFS62_RS24345 () | 96737..97762 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| HFS62_RS24350 () | 97695..99359 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| HFS62_RS24355 () | 99343..99903 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| HFS62_RS24360 () | 100110..100850 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| HFS62_RS24365 () | 101504..101992 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| HFS62_RS24370 () | 102251..103366 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| HFS62_RS24375 () | 103452..103868 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| HFS62_RS24380 () | 104052..104387 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| HFS62_RS24385 () | 104444..105010 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| HFS62_RS24390 () | 105042..105983 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|