MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 109942 bp
Accession: NZ_CP051351 Location: 1..109942 Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund strain CVM 30168 Replicon: plasmid p30168-1
Accession: NZ_CP051351 Location: 1..109942 Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund strain CVM 30168 Replicon: plasmid p30168-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFT09_RS22375 () | 1..801 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HFT09_RS22380 () | 891..3935 | + | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| HFT09_RS22385 () | 3935..4549 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| HFT09_RS22390 () | 4516..5718 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| HFT09_RS22395 () | 5747..6331 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| HFT09_RS22400 () | 6428..8590 | + | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| HFT09_RS22405 () | 8655..9317 | + | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HFT09_RS22410 () | 9389..9598 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| HFT09_RS22415 () | 9990..10166 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| HFT09_RS22420 () | 10231..10527 | - | 297 | WP_001275298.1 | hypothetical protein | - |
| HFT09_RS22425 () | 11150..11302 | - | 153 | WP_001331364.1 | Hok/Gef family protein | - |
| HFT09_RS22430 () | 11594..12802 | + | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| HFT09_RS22435 () | 12821..13891 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HFT09_RS22440 () | 13884..16175 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| HFT09_RS22445 () | 16212..18911 | - | 2700 | WP_001354015.1 | IncI1-type relaxase NikB | - |
| HFT09_RS22450 () | 18922..19254 | - | 333 | WP_001281051.1 | hypothetical protein | - |
| HFT09_RS22455 () | 19487..19822 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HFT09_RS22460 () | 19908..20756 | - | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| HFT09_RS22465 () | 21335..21586 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HFT09_RS22470 () | 21617..21814 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| HFT09_RS22475 () | 21837..22775 | - | 939 | WP_000078704.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HFT09_RS22480 () | 22840..23106 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| HFT09_RS22485 () | 23200..23634 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| HFT09_RS22490 () | 24363..24863 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| HFT09_RS22495 () | 25325..25921 | - | 597 | WP_000977997.1 | hypothetical protein | - |
| HFT09_RS22500 () | 25918..26637 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| HFT09_RS22505 () | 26634..27068 | - | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| HFT09_RS22510 () | 27123..29081 | - | 1959 | WP_024257856.1 | ParB/RepB/Spo0J family partition protein | - |
| HFT09_RS22515 () | 29140..29373 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| HFT09_RS22520 () | 29431..29958 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| HFT09_RS22525 () | 30342..30656 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| HFT09_RS22530 () | 30727..30918 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| HFT09_RS22535 () | 30915..31337 | - | 423 | WP_000271705.1 | DUF1380 family protein | - |
| HFT09_RS22540 () | 31384..31809 | - | 426 | WP_001198939.1 | antirestriction protein | - |
| HFT09_RS22545 () | 32227..33003 | - | 777 | WP_001005043.1 | hypothetical protein | - |
| HFT09_RS22550 () | 33049..33483 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| HFT09_RS22555 () | 33497..33718 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| HFT09_RS22560 () | 33719..34402 | - | 684 | WP_000086147.1 | DNA methylase | - |
| HFT09_RS22565 () | 34478..34790 | - | 313 | Protein_39 | hypothetical protein | - |
| HFT09_RS22570 () | 34787..35689 | - | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| HFT09_RS22575 () | 36368..36760 | - | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| HFT09_RS22580 () | 36764..37738 | - | 975 | WP_001217836.1 | hypothetical protein | - |
| HFT09_RS22585 () | 37977..38351 | - | 375 | WP_000752652.1 | hypothetical protein | - |
| HFT09_RS22590 () | 38351..38983 | - | 633 | WP_000312331.1 | ParA family protein | - |
| HFT09_RS22595 () | 39567..40352 | - | 786 | WP_001164192.1 | site-specific integrase | - |
| HFT09_RS22600 () | 40354..40767 | - | 414 | WP_000465034.1 | hypothetical protein | - |
| HFT09_RS22605 () | 41336..41596 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| HFT09_RS22610 () | 41593..42183 | + | 591 | WP_000194561.1 | hypothetical protein | - |
| HFT09_RS22615 () | 42201..42548 | - | 348 | WP_000142424.1 | hypothetical protein | - |
| HFT09_RS22620 () | 42667..43014 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| HFT09_RS22625 () | 43032..44912 | - | 1881 | WP_001283356.1 | colicin | - |
| HFT09_RS22630 () | 45191..46537 | - | 1347 | WP_001132019.1 | hypothetical protein | - |
| HFT09_RS22635 () | 46891..47493 | + | 603 | WP_000517689.1 | hypothetical protein | - |
| HFT09_RS22640 () | 47549..48043 | + | 495 | WP_001442119.1 | hypothetical protein | - |
| HFT09_RS22645 () | 48043..48309 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| HFT09_RS22650 () | 48786..49202 | - | 417 | WP_031611423.1 | hypothetical protein | - |
| HFT09_RS22655 () | 49211..52177 | - | 2967 | WP_001138064.1 | Tn3-like element TnAs3 family transposase | - |
| HFT09_RS22660 () | 52180..52740 | - | 561 | WP_000147567.1 | recombinase family protein | - |
| HFT09_RS22665 () | 52866..53216 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HFT09_RS22670 () | 53419..54432 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| HFT09_RS22675 () | 54581..55372 | + | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| HFT09_RS22680 () | 55539..56438 | + | 900 | WP_000131886.1 | aminoglycoside N-acetyltransferase AAC(3)-VIa | - |
| HFT09_RS22685 () | 56645..56965 | + | 321 | WP_000535481.1 | co-chaperone GroES | - |
| HFT09_RS22690 () | 57021..58658 | + | 1638 | WP_000719078.1 | chaperonin GroEL | - |
| HFT09_RS22695 () | 58847..60376 | + | 1530 | WP_001137772.1 | IS91 family transposase | - |
| HFT09_RS22700 () | 60644..61879 | + | 1236 | WP_001137513.1 | IS256-like element ISEc58 family transposase | - |
| HFT09_RS22705 () | 62097..62444 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| HFT09_RS22710 () | 62438..63277 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| HFT09_RS22715 () | 63405..63905 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| HFT09_RS22720 () | 64081..64863 | - | 783 | WP_001163403.1 | IS21-like element IS1326 family helper ATPase IstB | - |
| HFT09_RS22725 () | 64853..66376 | - | 1524 | WP_001324342.1 | IS21-like element IS1326 family transposase | - |
| HFT09_RS22730 () | 66478..66666 | - | 189 | WP_033559670.1 | hypothetical protein | - |
| HFT09_RS22735 () | 66668..69673 | - | 3006 | WP_001143775.1 | Tn3-like element Tn3 family transposase | - |
| HFT09_RS22740 () | 69835..70392 | + | 558 | WP_001217881.1 | recombinase family protein | - |
| HFT09_RS22745 () | 70575..71435 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| HFT09_RS22750 () | 71599..72447 | - | 849 | WP_001058012.1 | 3'-5' exonuclease | - |
| HFT09_RS22755 () | 72493..72774 | - | 282 | WP_000969983.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFT09_RS22760 () | 72771..73040 | - | 270 | WP_000079943.1 | hypothetical protein | Antitoxin Detail |
| HFT09_RS22765 () | 73948..74979 | - | 1032 | WP_000907875.1 | replication initiation protein | - |
| HFT09_RS22770 () | 75952..76215 | + | 264 | WP_001324596.1 | ash family protein | - |
| HFT09_RS22775 () | 76133..76420 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HFT09_RS22780 () | 76862..77395 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| HFT09_RS22785 () | 77648..78331 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| HFT09_RS22790 () | 78345..78911 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| HFT09_RS22795 () | 79179..79433 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| HFT09_RS22800 () | 79476..79928 | + | 453 | WP_000008893.1 | hypothetical protein | - |
| HFT09_RS22805 () | 80602..81669 | + | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| HFT09_RS22810 () | 81669..82106 | + | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| HFT09_RS22815 () | 82120..83802 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| HFT09_RS22820 () | 83795..85090 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| HFT09_RS22825 () | 85077..85529 | + | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| HFT09_RS22830 () | 85540..87093 | + | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| HFT09_RS22835 () | 87106..88203 | + | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| HFT09_RS22840 () | 88221..88835 | + | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| HFT09_RS22845 () | 88845..89405 | + | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| HFT09_RS22850 () | 89390..90046 | + | 657 | WP_001193553.1 | prepilin peptidase | - |
| HFT09_RS22855 () | 90046..91338 | + | 1293 | WP_001417545.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFT09_RS22860 () | 92097..92252 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| HFT09_RS22865 () | 93098..94252 | + | 1155 | WP_001139957.1 | integrase | - |
| HFT09_RS22870 () | 94403..95227 | + | 825 | WP_001238939.1 | hypothetical protein | - |
| HFT09_RS22875 () | 95312..96514 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| HFT09_RS22880 () | 96574..97158 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HFT09_RS22885 () | 97553..98011 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HFT09_RS22890 () | 98008..98826 | + | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| HFT09_RS22895 () | 98823..99971 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| HFT09_RS22900 () | 99968..100258 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| HFT09_RS22905 () | 100273..100824 | + | 552 | WP_000014583.1 | phospholipase D family protein | - |
| HFT09_RS22910 () | 100914..104681 | + | 3768 | WP_001141529.1 | DNA primase | - |
| HFT09_RS22915 () | 104699..105046 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HFT09_RS22920 () | 105043..105735 | + | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| HFT09_RS22925 () | 105746..106729 | + | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| HFT09_RS22930 () | 106732..108021 | + | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| HFT09_RS22935 () | 108021..108725 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HFT09_RS22940 () | 108725..109252 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HFT09_RS22945 () | 109303..109707 | + | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|