MGE detailed information
MGE type: Genomic_island MGE length: 46592 bp
Accession: NZ_CP051222 Location: 2905050..2951641 Organism: Escherichia coli strain SCZE5 Replicon: chromosome
Accession: NZ_CP051222 Location: 2905050..2951641 Organism: Escherichia coli strain SCZE5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF562_RS14230 () | 2900515..2901672 | + | 1158 | WP_001070375.1 | glucans biosynthesis protein MdoC | - |
| HF562_RS14235 () | 2901680..2903161 | - | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| HF562_RS14240 () | 2903103..2903636 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| HF562_RS14245 () | 2903731..2904042 | - | 312 | WP_000489585.1 | hypothetical protein | - |
| HF562_RS14250 () | 2904163..2904495 | - | 333 | WP_000992837.1 | curli assembly protein CsgC | - |
| HF562_RS14255 () | 2904554..2905009 | - | 456 | WP_000771437.1 | curlin major subunit CsgA | - |
| HF562_RS14260 () | 2905050..2905505 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| HF562_RS14265 () | 2906260..2906910 | + | 651 | WP_000481506.1 | CsgBAC operon transcriptional regulatory protein | VF |
| HF562_RS14270 () | 2906915..2907304 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| HF562_RS14275 () | 2907329..2907745 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| HF562_RS14280 () | 2907772..2908605 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| HF562_RS14285 () | 2908669..2909160 | - | 492 | WP_001300785.1 | DUF1097 domain-containing protein | - |
| HF562_RS14290 () | 2909262..2909816 | - | 555 | WP_001001902.1 | molecular chaperone YcdY | - |
| HF562_RS14295 () | 2909840..2910576 | - | 737 | Protein_2803 | zinc-binding phosphatase | - |
| HF562_RS14300 () | 2910631..2911569 | - | 939 | WP_000351315.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| HF562_RS14310 () | 2912041..2912882 | - | 842 | Protein_2805 | DUF4942 domain-containing protein | - |
| HF562_RS14315 () | 2912967..2913164 | - | 198 | WP_000839253.1 | DUF957 domain-containing protein | - |
| HF562_RS14320 () | 2913181..2913669 | - | 489 | WP_032180032.1 | hypothetical protein | - |
| HF562_RS14325 () | 2913666..2914049 | - | 384 | WP_000854686.1 | TA system toxin CbtA family protein | Toxin Detail |
| HF562_RS14330 () | 2914130..2914510 | - | 381 | WP_001285602.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HF562_RS14335 () | 2914521..2915204 | - | 684 | WP_000086768.1 | hypothetical protein | - |
| HF562_RS14340 () | 2915223..2915444 | - | 222 | WP_000692298.1 | DUF987 domain-containing protein | - |
| HF562_RS14345 () | 2915507..2915983 | - | 477 | WP_001186726.1 | RadC family protein | - |
| HF562_RS14350 () | 2915999..2916484 | - | 486 | WP_000214307.1 | antirestriction protein | - |
| HF562_RS14355 () | 2916576..2916911 | - | 336 | Protein_2814 | DUF932 domain-containing protein | - |
| HF562_RS14360 () | 2916907..2918031 | - | 1125 | Protein_2815 | AIDA repeat-containing protein | - |
| HF562_RS14365 () | 2918403..2919275 | - | 873 | WP_001069760.1 | GTPase family protein | - |
| HF562_RS14370 () | 2919643..2920338 | - | 696 | WP_032180028.1 | hypothetical protein | - |
| HF562_RS14375 () | 2920341..2920847 | - | 507 | WP_032180027.1 | hypothetical protein | - |
| HF562_RS14380 () | 2920844..2921674 | - | 831 | WP_001399639.1 | Sporulation initiation inhibitor protein Soj | VF |
| HF562_RS14385 () | 2922996..2923235 | + | 240 | WP_024224214.1 | hypothetical protein | - |
| HF562_RS14390 () | 2923275..2925713 | + | 2439 | WP_032180025.1 | type I restriction-modification system subunit M | - |
| HF562_RS14395 () | 2925725..2927068 | + | 1344 | WP_032180130.1 | restriction endonuclease subunit S | - |
| HF562_RS14400 () | 2927081..2927737 | + | 657 | WP_000312833.1 | DUF4433 domain-containing protein | Toxin Detail |
| HF562_RS14405 () | 2927734..2928801 | + | 1068 | WP_000634203.1 | macro domain-containing protein | Antitoxin Detail |
| HF562_RS14410 () | 2928820..2931915 | + | 3096 | WP_000108736.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HF562_RS14415 () | 2931915..2932631 | + | 717 | WP_001122107.1 | M48 family metallopeptidase | - |
| HF562_RS14420 () | 2932976..2933590 | + | 615 | Protein_2827 | IS3 family transposase ISSd1 | Transposase |
| HF562_RS14425 () | 2933834..2935132 | - | 1299 | WP_000262203.1 | anaerobic C4-dicarboxylate transporter | - |
| HF562_RS14430 () | 2935198..2935917 | - | 720 | WP_000677245.1 | amino acid racemase | - |
| HF562_RS14435 () | 2936262..2937206 | + | 945 | WP_001333359.1 | HTH-type transcriptional regulator YjiE | VF |
| HF562_RS14440 () | 2937324..2937782 | - | 459 | WP_021513032.1 | IS200-IS605 family transposase IS200C | Transposase |
| HF562_RS14445 () | 2937922..2939268 | - | 1347 | WP_000483766.1 | IS4 family transposase IS4 | Transposase |
| HF562_RS14450 () | 2939624..2939836 | - | 213 | WP_001505166.1 | tellurite resistance TerB family protein | - |
| HF562_RS14455 () | 2940044..2940826 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| HF562_RS14460 () | 2940823..2941845 | - | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| HF562_RS14465 () | 2942556..2944094 | - | 1539 | WP_168728563.1 | IS66 family transposase ISEc8 | Transposase |
| HF562_RS14470 () | 2944144..2944491 | - | 348 | WP_000612601.1 | IS66 family transposase ISEc8 | Transposase |
| HF562_RS14475 () | 2944488..2944868 | - | 381 | WP_021566758.1 | IS66 family transposase ISEc8 | Transposase |
| HF562_RS14480 () | 2945081..2945191 | + | 111 | Protein_2839 | transposase domain-containing protein | - |
| HF562_RS14485 () | 2945323..2946336 | - | 1014 | WP_000107485.1 | aldose 1-epimerase family protein | - |
| HF562_RS14490 () | 2946348..2947664 | - | 1317 | WP_000998346.1 | L-fucose:H+ symporter permease | - |
| HF562_RS14495 () | 2947692..2948612 | - | 921 | WP_000350265.1 | ribokinase | - |
| HF562_RS14500 () | 2948918..2949700 | + | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| HF562_RS14505 () | 2949702..2949928 | - | 227 | Protein_2844 | acetolactate synthase small subunit | - |
| HF562_RS14515 () | 2951944..2952081 | - | 138 | WP_154761740.1 | hypothetical protein | - |
| HF562_RS24935 () | 2952210..2953398 | + | 1189 | Protein_2847 | UxaA family hydrolase | - |
| HF562_RS14530 () | 2953461..2954285 | - | 825 | WP_000072197.1 | aga operon transcriptional regulator AgaR | - |
| HF562_RS14535 () | 2954468..2954872 | + | 405 | WP_000195940.1 | class II fructose-bisphosphate aldolase | - |
| HF562_RS14540 () | 2954986..2956557 | + | 1572 | WP_000192271.1 | maltose/glucose-specific PTS transporter subunit IIBC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|