MGE detailed information
MGE type: Prophage MGE length: 24377 bp
Accession: NZ_CP051222 Location: 2546170..2570546 Organism: Escherichia coli strain SCZE5 Replicon: chromosome
Accession: NZ_CP051222 Location: 2546170..2570546 Organism: Escherichia coli strain SCZE5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF562_RS12390 () | 2541669..2542118 | + | 450 | WP_113403948.1 | DMT family transporter | - |
| HF562_RS12395 () | 2542119..2542352 | - | 234 | WP_000018633.1 | YdcY family protein | - |
| HF562_RS12400 () | 2542438..2542611 | - | 174 | WP_000061178.1 | orphan toxin OrtT | - |
| HF562_RS12405 () | 2542806..2542901 | + | 96 | WP_001303494.1 | stress response membrane protein YncL | - |
| HF562_RS12410 () | 2542998..2544422 | - | 1425 | WP_001163875.1 | aminobutyraldehyde dehydrogenase | - |
| HF562_RS12415 () | 2544444..2545238 | - | 795 | WP_000555458.1 | ABC transporter permease | - |
| HF562_RS12420 () | 2545228..2546169 | - | 942 | WP_001251313.1 | ABC transporter permease | - |
| HF562_RS12425 () | 2546170..2547183 | - | 1014 | WP_000220415.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| HF562_RS12430 () | 2547201..2548346 | - | 1146 | WP_113403949.1 | ABC transporter substrate-binding protein | - |
| HF562_RS12435 () | 2548591..2549997 | - | 1407 | WP_000760626.1 | PLP-dependent aminotransferase family protein | - |
| HF562_RS12440 () | 2550076..2550492 | - | 417 | WP_001270286.1 | type II toxin-antitoxin system antitoxin HicB | Antitoxin Detail |
| HF562_RS12445 () | 2550538..2550714 | - | 177 | WP_000813794.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| HF562_RS12450 () | 2550936..2551166 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| HF562_RS12455 () | 2551258..2553219 | - | 1962 | WP_001301045.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| HF562_RS12460 () | 2553292..2553828 | - | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| HF562_RS12465 () | 2553881..2555095 | + | 1215 | WP_001326689.1 | BenE family transporter YdcO | - |
| HF562_RS12470 () | 2555135..2556172 | - | 1038 | Protein_2441 | IS200-IS605 family transposase IS609 | Transposase |
| HF562_RS12475 () | 2556190..2556887 | - | 698 | Protein_2442 | IS1 family transposase | - |
| HF562_RS12480 () | 2556944..2557120 | - | 177 | Protein_2443 | IS200-IS605 family transposase IS609 | Transposase |
| HF562_RS12485 () | 2557128..2557634 | + | 507 | Protein_2444 | IS200-IS605 family transposase IS609 | Transposase |
| HF562_RS12490 () | 2557652..2558320 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| HF562_RS12495 () | 2558623..2559216 | - | 594 | WP_000586744.1 | tellurite resistance methyltransferase TehB | - |
| HF562_RS12500 () | 2559213..2560205 | - | 993 | WP_001301046.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| HF562_RS12505 () | 2560329..2561308 | + | 980 | Protein_2448 | hypothetical protein | - |
| HF562_RS12510 () | 2561300..2561839 | - | 540 | WP_000140873.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| HF562_RS12515 () | 2561902..2562126 | - | 225 | WP_001296778.1 | YdcH family protein | - |
| HF562_RS12520 () | 2562266..2563921 | - | 1656 | WP_000375961.1 | glucan biosynthesis protein OpgD | - |
| HF562_RS12525 () | 2564146..2565489 | - | 1344 | WP_000013789.1 | VOC family protein | - |
| HF562_RS12530 () | 2565706..2566629 | + | 924 | WP_000414567.1 | LysR family transcriptional regulator | - |
| HF562_RS12535 () | 2566667..2568307 | - | 1641 | WP_001098559.1 | Methyl-accepting chemotaxis protein III | VF |
| HF562_RS12540 () | 2568683..2570052 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| HF562_RS12545 () | 2570152..2570301 | + | 150 | WP_001320773.1 | type I toxin-antitoxin system toxin HokB | - |
| HF562_RS12550 () | 2570373..2570546 | - | 174 | WP_000731833.1 | periplasmic protein | - |
| HF562_RS12555 () | 2570791..2571321 | - | 531 | WP_000428998.1 | cytochrome b561 | - |
| HF562_RS12560 () | 2571510..2572511 | + | 1002 | WP_000048667.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| HF562_RS12565 () | 2572553..2573992 | - | 1440 | WP_000115936.1 | aldehyde dehydrogenase | - |
| HF562_RS12570 () | 2574189..2574989 | - | 801 | WP_001027964.1 | YdcF family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|