MGE detailed information
MGE type: Prophage MGE length: 44034 bp
Accession: NZ_CP051222 Location: 2381134..2425167 Organism: Escherichia coli strain SCZE5 Replicon: chromosome
Accession: NZ_CP051222 Location: 2381134..2425167 Organism: Escherichia coli strain SCZE5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF562_RS11545 () | 2377033..2378253 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| HF562_RS11550 () | 2378378..2379073 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| HF562_RS11555 () | 2379026..2380318 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| HF562_RS11560 () | 2380477..2381091 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| HF562_RS11565 () | 2381134..2381988 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| HF562_RS11570 () | 2381990..2382607 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| HF562_RS11575 () | 2382618..2385041 | - | 2424 | WP_097742662.1 | dimethyl sulfoxide reductase subunit A | - |
| HF562_RS11580 () | 2385102..2387528 | - | 2427 | WP_000041695.1 | dimethyl sulfoxide reductase subunit A | - |
| HF562_RS11585 () | 2387727..2388032 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| HF562_RS11590 () | 2388140..2388850 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HF562_RS11595 () | 2388853..2389413 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HF562_RS11600 () | 2389448..2389789 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HF562_RS11605 () | 2389924..2390250 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| HF562_RS11610 () | 2390456..2391670 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HF562_RS11615 () | 2391682..2392701 | + | 1020 | WP_000836067.1 | Zn-dependent oxidoreductase | - |
| HF562_RS11620 () | 2392759..2392869 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| HF562_RS11625 () | 2392889..2394169 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HF562_RS11630 () | 2394204..2394454 | - | 251 | Protein_2275 | excisionase family protein | - |
| HF562_RS11635 () | 2394527..2395588 | - | 1062 | WP_113403961.1 | exonuclease | - |
| HF562_RS11640 () | 2395682..2395873 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| HF562_RS11645 () | 2395870..2396058 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HF562_RS11650 () | 2396545..2397120 | - | 576 | WP_000344950.1 | hypothetical protein | - |
| HF562_RS11655 () | 2397122..2397277 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| HF562_RS11660 () | 2397444..2397851 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| HF562_RS11665 () | 2397932..2398159 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| HF562_RS11670 () | 2398143..2398664 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| HF562_RS11675 () | 2398645..2399610 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| HF562_RS11680 () | 2399651..2400049 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| HF562_RS11685 () | 2400252..2400917 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| HF562_RS11690 () | 2401126..2401740 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| HF562_RS11695 () | 2401737..2402765 | + | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| HF562_RS11700 () | 2403150..2404519 | + | 1370 | WP_168728556.1 | IS3 family transposase IS150 | Transposase |
| HF562_RS11705 () | 2404695..2406008 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| HF562_RS11710 () | 2406445..2406777 | - | 333 | WP_001301033.1 | protein FlxA | - |
| HF562_RS11715 () | 2406980..2407285 | - | 306 | WP_071598992.1 | hypothetical protein | - |
| HF562_RS11720 () | 2407310..2407549 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HF562_RS11725 () | 2407549..2407836 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HF562_RS11730 () | 2407908..2408063 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HF562_RS11735 () | 2408280..2408531 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| HF562_RS11740 () | 2408757..2408918 | + | 162 | Protein_2297 | antitermination protein | - |
| HF562_RS11745 () | 2409196..2409285 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| HF562_RS11750 () | 2409340..2409552 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HF562_RS11755 () | 2409853..2410068 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HF562_RS11760 () | 2410822..2411037 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HF562_RS11765 () | 2411042..2411353 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| HF562_RS11770 () | 2411350..2411883 | + | 534 | WP_001092971.1 | lysozyme | - |
| HF562_RS11775 () | 2411880..2412377 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HF562_RS11780 () | 2412740..2412952 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HF562_RS11785 () | 2412963..2413151 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| HF562_RS11790 () | 2413154..2413219 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| HF562_RS11795 () | 2413299..2413454 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| HF562_RS11800 () | 2413626..2413799 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HF562_RS11805 () | 2413951..2414361 | - | 411 | WP_001571459.1 | DUF1398 domain-containing protein | - |
| HF562_RS11810 () | 2414419..2414652 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HF562_RS11815 () | 2415041..2415337 | + | 297 | WP_113403960.1 | terminase small subunit | - |
| HF562_RS11820 () | 2415548..2416573 | + | 1026 | WP_000118192.1 | major capsid protein | - |
| HF562_RS11825 () | 2416615..2417010 | + | 396 | WP_113403959.1 | DNA-packaging protein FI | - |
| HF562_RS11830 () | 2417022..2417375 | + | 354 | WP_000752966.1 | head-tail joining protein | - |
| HF562_RS11835 () | 2417387..2417970 | + | 584 | Protein_2316 | Outer membrane protein X | VF |
| HF562_RS11840 () | 2418035..2420434 | + | 2400 | WP_168728557.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HF562_RS11845 () | 2420431..2420712 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| HF562_RS11850 () | 2420722..2421426 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| HF562_RS11855 () | 2421437..2421730 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| HF562_RS11860 () | 2421750..2421860 | + | 111 | Protein_2321 | tail fiber assembly protein | - |
| HF562_RS11865 () | 2421958..2422548 | - | 591 | WP_000086519.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HF562_RS11870 () | 2422865..2423098 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HF562_RS11875 () | 2423167..2423280 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| HF562_RS11880 () | 2423884..2425167 | + | 1284 | Protein_2325 | MHS family MFS transporter YdfJ | - |
| HF562_RS11885 () | 2425256..2426716 | + | 1461 | WP_113404048.1 | mannitol dehydrogenase family protein | - |
| HF562_RS11890 () | 2426752..2426955 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HF562_RS11895 () | 2427132..2427818 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| HF562_RS11900 () | 2427907..2428653 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|