MGE detailed information
MGE type: Genomic_island MGE length: 27901 bp
Accession: NZ_CP051218 Location: 3717212..3745112 Organism: Salmonella sp. SCFS4 Replicon: chromosome
Accession: NZ_CP051218 Location: 3717212..3745112 Organism: Salmonella sp. SCFS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF553_RS18195 () | 3714268..3715725 | + | 1458 | WP_001577316.1 | multidrug efflux transporter outer membrane subunit MdsC | - |
| HF553_RS18200 () | 3715775..3716134 | - | 360 | WP_000722978.1 | DUF4156 domain-containing protein | - |
| HF553_RS18205 () | 3716192..3716416 | - | 225 | WP_000737124.1 | membrane protein | - |
| HF553_RS18210 () | 3716427..3717068 | - | 642 | WP_000610822.1 | helix-turn-helix transcriptional regulator | - |
| HF553_RS18215 () | 3717212..3717736 | - | 525 | WP_000830237.1 | Attachment invasion locus protein | VF |
| HF553_RS18220 () | 3718138..3718626 | - | 489 | WP_000545421.1 | hypothetical protein | - |
| HF553_RS18225 () | 3718599..3719342 | - | 744 | WP_023227310.1 | hypothetical protein | VF |
| HF553_RS18230 () | 3719442..3721016 | - | 1575 | WP_072162162.1 | putative cyclic di-GMP phosphodiesterase PdeN | VF |
| HF553_RS18235 () | 3721528..3721828 | - | 301 | Protein_3573 | hypothetical protein | - |
| HF553_RS18240 () | 3721801..3722535 | - | 735 | WP_001005859.1 | hypothetical protein | VF |
| HF553_RS18245 () | 3723199..3723735 | + | 537 | WP_000062033.1 | S-fimbrial protein subunit SfaA | VF |
| HF553_RS18250 () | 3723797..3724558 | + | 762 | WP_000781485.1 | putative fimbrial chaperone YadV | VF |
| HF553_RS18255 () | 3724542..3727103 | + | 2562 | WP_064441706.1 | Outer membrane usher protein FimD | VF |
| HF553_RS18260 () | 3727108..3728433 | + | 1326 | WP_000899098.1 | fimbrial usher protein StbD | - |
| HF553_RS18265 () | 3728399..3729157 | + | 759 | WP_023227313.1 | putative fimbrial chaperone YadV | VF |
| HF553_RS18270 () | 3729205..3729399 | - | 195 | WP_023227314.1 | hypothetical protein | - |
| HF553_RS18275 () | 3730005..3731324 | + | 1320 | WP_000144692.1 | Prophage integrase IntA ; Integrase | Integrase |
| HF553_RS18280 () | 3731417..3732265 | - | 849 | WP_096195002.1 | DUF4942 domain-containing protein | - |
| HF553_RS18285 () | 3732350..3732547 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| HF553_RS18290 () | 3732575..3732772 | - | 198 | Protein_3584 | hypothetical protein | - |
| HF553_RS18295 () | 3732769..3733146 | - | 378 | WP_000854821.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| HF553_RS18300 () | 3733236..3733604 | - | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HF553_RS18305 () | 3733684..3733905 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| HF553_RS18310 () | 3733992..3734468 | - | 477 | WP_001186711.1 | RadC family protein | - |
| HF553_RS18315 () | 3734484..3734969 | - | 486 | WP_171455520.1 | antirestriction protein | - |
| HF553_RS18320 () | 3735061..3735879 | - | 819 | WP_001610805.1 | DUF945 domain-containing protein | - |
| HF553_RS18325 () | 3736207..3739053 | - | 2847 | WP_171455521.1 | Ag43/Cah family autotransporter adhesin | - |
| HF553_RS18330 () | 3739421..3740293 | - | 873 | WP_021527023.1 | GTPase family protein | - |
| HF553_RS18335 () | 3740648..3741388 | + | 741 | WP_000960228.1 | DUF2971 domain-containing protein | - |
| HF553_RS18340 () | 3741534..3741881 | - | 348 | WP_000569129.1 | GNAT family N-acetyltransferase | - |
| HF553_RS18345 () | 3741972..3743042 | - | 1071 | WP_171455522.1 | hypothetical protein | - |
| HF553_RS18350 () | 3743952..3745100 | - | 1149 | WP_001336040.1 | hypothetical protein | - |
| HF553_RS18355 () | 3745504..3745765 | - | 262 | Protein_3597 | hypothetical protein | - |
| HF553_RS18360 () | 3746440..3746676 | - | 237 | Protein_3598 | IS21 family transposase | - |
| HF553_RS18365 () | 3747508..3748110 | - | 603 | WP_021527306.1 | hypothetical protein | - |
| HF553_RS18370 () | 3748204..3748410 | - | 207 | WP_001371489.1 | AlpA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|