MGE detailed information
MGE type: Prophage MGE length: 26851 bp
Accession: NZ_CP051218 Location: 2213081..2239931 Organism: Salmonella sp. SCFS4 Replicon: chromosome
Accession: NZ_CP051218 Location: 2213081..2239931 Organism: Salmonella sp. SCFS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF553_RS10745 () | 2209354..2209995 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HF553_RS10750 () | 2210095..2211273 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HF553_RS10755 () | 2211404..2211694 | + | 291 | WP_001579458.1 | DNA damage-inducible protein YebG | - |
| HF553_RS10760 () | 2211762..2212115 | + | 354 | WP_001042123.1 | hypothetical protein | - |
| HF553_RS10765 () | 2212209..2212868 | + | 660 | WP_000024709.1 | tellurite resistance TerB family protein | - |
| HF553_RS10770 () | 2213081..2215132 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| HF553_RS10775 () | 2215167..2215865 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| HF553_RS10780 () | 2215889..2216545 | - | 657 | WP_023227121.1 | carbon-nitrogen hydrolase family protein | - |
| HF553_RS10785 () | 2216653..2216883 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| HF553_RS10790 () | 2217021..2217395 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| HF553_RS10795 () | 2217396..2218271 | + | 876 | WP_001579467.1 | copper homeostasis membrane protein CopD | - |
| HF553_RS10800 () | 2218288..2218641 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - () | 2218741..2218886 | - | 146 | - | - | Antitoxin Detail |
| - () | 2218781..2218884 | + | 104 | - | - | Toxin Detail |
| HF553_RS10805 () | 2219005..2219745 | - | 741 | WP_072162123.1 | hypothetical protein ; Integrase | Integrase |
| HF553_RS10810 () | 2219910..2220895 | + | 986 | Protein_2116 | DUF1353 domain-containing protein | - |
| HF553_RS10815 () | 2220944..2221053 | + | 110 | Protein_2117 | tail fiber assembly protein | - |
| HF553_RS10820 () | 2221144..2221329 | - | 186 | WP_071787785.1 | hypothetical protein | - |
| HF553_RS10825 () | 2221765..2222535 | - | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| HF553_RS10830 () | 2223016..2223153 | + | 138 | Protein_2120 | helix-turn-helix domain-containing protein | - |
| HF553_RS10835 () | 2223182..2223982 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| HF553_RS10840 () | 2224922..2225289 | - | 368 | Protein_2122 | tyrosine-type recombinase/integrase | - |
| HF553_RS10845 () | 2225413..2226620 | + | 1208 | Protein_2123 | IS256 family transposase ISEc39 | Transposase |
| HF553_RS10850 () | 2226766..2226906 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| HF553_RS10855 () | 2227072..2227341 | - | 270 | WP_171455503.1 | hypothetical protein | - |
| HF553_RS10860 () | 2227711..2228130 | + | 420 | WP_023226867.1 | GNAT family N-acetyltransferase | - |
| HF553_RS10865 () | 2228517..2228993 | - | 477 | WP_023226866.1 | hypothetical protein | - |
| HF553_RS10870 () | 2229321..2229716 | - | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| HF553_RS10875 () | 2230400..2231122 | + | 723 | WP_023226865.1 | Guanine nucleotide exchange factor sopE2 | VF |
| HF553_RS10880 () | 2231407..2231571 | + | 165 | WP_001134856.1 | membrane protein | - |
| HF553_RS10885 () | 2231794..2232444 | + | 651 | WP_023226864.1 | protein-serine/threonine phosphatase | - |
| HF553_RS10890 () | 2232463..2232654 | - | 192 | WP_000457838.1 | YebW family protein | - |
| HF553_RS10895 () | 2232765..2233001 | - | 237 | WP_024131108.1 | DUF1480 family protein | - |
| HF553_RS10900 () | 2233119..2234558 | - | 1440 | WP_051129280.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HF553_RS10905 () | 2234636..2237269 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| HF553_RS10910 () | 2237238..2238521 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| HF553_RS10915 () | 2238650..2239147 | + | 498 | WP_023226862.1 | GAF domain-containing protein | - |
| HF553_RS10920 () | 2239245..2239931 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| HF553_RS10925 () | 2239951..2241999 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| HF553_RS10930 () | 2242193..2243074 | + | 882 | WP_000984498.1 | protease HtpX | - |
| HF553_RS10935 () | 2243122..2244495 | - | 1374 | WP_000416139.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|