MGE detailed information
MGE type: Genomic_island MGE length: 11328 bp
Accession: NZ_CP051218 Location: 1033400..1044727 Organism: Salmonella sp. SCFS4 Replicon: chromosome
Accession: NZ_CP051218 Location: 1033400..1044727 Organism: Salmonella sp. SCFS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF553_RS05105 () | 1028846..1029944 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| HF553_RS05110 () | 1029954..1031471 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| HF553_RS05115 () | 1031547..1032092 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| HF553_RS05120 () | 1032357..1033115 | + | 759 | WP_000244318.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| HF553_RS05130 () | 1033400..1034206 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| HF553_RS05135 () | 1034481..1034741 | - | 261 | WP_023227725.1 | hypothetical protein | - |
| HF553_RS05140 () | 1034909..1035136 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HF553_RS05145 () | 1035136..1035534 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HF553_RS05150 () | 1036338..1036874 | + | 537 | WP_023227726.1 | Attachment invasion locus protein | VF |
| HF553_RS05155 () | 1036921..1037553 | + | 633 | WP_023227727.1 | YfdX family protein | - |
| HF553_RS05160 () | 1038272..1038859 | + | 588 | WP_023227728.1 | putative fimbrial-like protein YbgD | VF |
| HF553_RS05165 () | 1038979..1041468 | + | 2490 | WP_064441659.1 | Outer membrane usher protein PapC | VF |
| HF553_RS05170 () | 1041509..1042252 | + | 744 | WP_000798491.1 | Chaperone protein PapD | VF |
| HF553_RS05175 () | 1042249..1043325 | + | 1077 | WP_023227730.1 | fimbrial OM outer membrane protein | - |
| HF553_RS05180 () | 1043470..1043982 | + | 513 | WP_000336260.1 | CaiF/GrlA family transcriptional regulator | - |
| HF553_RS05185 () | 1043969..1044727 | + | 759 | WP_023227731.1 | hypothetical protein | - |
| HF553_RS05190 () | 1044937..1045833 | - | 897 | WP_023227732.1 | nickel/cobalt efflux protein RcnA | - |
| HF553_RS05195 () | 1045955..1046227 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| HF553_RS05200 () | 1046258..1047487 | - | 1230 | WP_000036841.1 | amino acid permease | - |
| HF553_RS05205 () | 1047629..1048084 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| HF553_RS05210 () | 1048188..1049051 | + | 864 | WP_023227733.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|