MGE detailed information
MGE type: Prophage MGE length: 55347 bp
Accession: NZ_CP051169 Location: 1845190..1900536 Organism: Ralstonia solanacearum strain RUN2474 Replicon: chromosome
Accession: NZ_CP051169 Location: 1845190..1900536 Organism: Ralstonia solanacearum strain RUN2474 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HF909_RS08880 () | 1840558..1841766 | + | 1209 | WP_193036621.1 | efflux RND transporter periplasmic adaptor subunit | - |
HF909_RS08885 () | 1841833..1844952 | + | 3120 | WP_193025427.1 | efflux RND transporter permease subunit | - |
HF909_RS08895 () | 1845190..1846416 | - | 1227 | WP_193036623.1 | Putative defective protein IntQ ; Integrase | Integrase |
HF909_RS08900 () | 1846676..1848535 | - | 1860 | WP_193036625.1 | DNA cytosine methyltransferase | - |
HF909_RS08905 () | 1849471..1849857 | - | 387 | Protein_1747 | hypothetical protein | - |
HF909_RS08910 () | 1849854..1850378 | - | 525 | WP_193036627.1 | HD family hydrolase | - |
HF909_RS08915 () | 1850375..1850851 | - | 477 | WP_193036629.1 | hypothetical protein | - |
HF909_RS08920 () | 1850848..1851402 | - | 555 | WP_193036631.1 | deoxynucleotide monophosphate kinase | - |
HF909_RS08925 () | 1851455..1852306 | - | 852 | WP_193036633.1 | DUF2303 family protein | - |
HF909_RS08930 () | 1852343..1852687 | - | 345 | WP_193036635.1 | hypothetical protein | - |
HF909_RS08935 () | 1852737..1852943 | - | 207 | WP_193036637.1 | hypothetical protein | - |
HF909_RS08940 () | 1852945..1853109 | - | 165 | WP_193036639.1 | hypothetical protein | - |
HF909_RS08945 () | 1853115..1853516 | - | 402 | WP_193036641.1 | hypothetical protein | - |
HF909_RS08950 () | 1853516..1853725 | - | 210 | WP_193036818.1 | hypothetical protein | - |
HF909_RS08955 () | 1853734..1853877 | - | 144 | WP_193036643.1 | hypothetical protein | - |
HF909_RS08960 () | 1854026..1854505 | + | 480 | WP_193036645.1 | helix-turn-helix domain-containing protein | - |
HF909_RS08965 () | 1854674..1855480 | + | 807 | WP_193036647.1 | hypothetical protein | - |
HF909_RS08970 () | 1855559..1856188 | - | 630 | WP_193036649.1 | hypothetical protein | - |
HF909_RS08975 () | 1856576..1857085 | + | 510 | WP_193034467.1 | hypothetical protein | - |
HF909_RS08980 () | 1857078..1857302 | + | 225 | WP_193034468.1 | hypothetical protein | - |
HF909_RS08985 () | 1857299..1857583 | + | 285 | WP_193034469.1 | hypothetical protein | - |
HF909_RS08990 () | 1857580..1860006 | + | 2427 | WP_193034470.1 | hypothetical protein | - |
HF909_RS08995 () | 1860591..1860998 | + | 408 | WP_193034471.1 | hypothetical protein | - |
HF909_RS09000 () | 1861210..1861647 | + | 438 | WP_193034472.1 | HNH endonuclease | - |
HF909_RS09005 () | 1861875..1862408 | + | 534 | WP_210772677.1 | hypothetical protein | - |
HF909_RS09010 () | 1862459..1864117 | + | 1659 | WP_193034473.1 | terminase large subunit | - |
HF909_RS09015 () | 1864114..1865421 | + | 1308 | WP_193034474.1 | phage portal protein | - |
HF909_RS09020 () | 1865387..1866154 | + | 768 | WP_193034475.1 | Clp protease ClpP | - |
HF909_RS09025 () | 1866219..1867475 | + | 1257 | WP_193034476.1 | phage major capsid protein | - |
HF909_RS09030 () | 1867545..1867907 | + | 363 | WP_193034477.1 | hypothetical protein | - |
HF909_RS09035 () | 1867911..1868465 | + | 555 | WP_193034478.1 | phage gp6-like head-tail connector protein | - |
HF909_RS09040 () | 1868466..1868792 | + | 327 | WP_193034479.1 | phage head closure protein | - |
HF909_RS09045 () | 1868795..1869295 | + | 501 | WP_193034480.1 | HK97 gp10 family phage protein | - |
HF909_RS09050 () | 1869285..1869638 | + | 354 | WP_193034481.1 | DUF3168 domain-containing protein | - |
HF909_RS09055 () | 1869703..1870356 | + | 654 | WP_193034482.1 | phage tail protein | - |
HF909_RS09060 () | 1870363..1870683 | + | 321 | WP_193034483.1 | hypothetical protein | - |
HF909_RS09065 () | 1870731..1870991 | + | 261 | WP_193036730.1 | DUF1799 domain-containing protein | - |
HF909_RS09070 () | 1870993..1873845 | + | 2853 | WP_193034484.1 | phage tail tape measure protein | - |
HF909_RS09075 () | 1873857..1874195 | + | 339 | WP_193034485.1 | phage tail protein | - |
HF909_RS09080 () | 1874192..1874827 | + | 636 | WP_193034486.1 | tail fiber protein | - |
HF909_RS09085 () | 1874833..1875429 | + | 597 | WP_193034487.1 | tail fiber assembly protein | - |
HF909_RS09090 () | 1875426..1876127 | + | 702 | WP_193034488.1 | phage minor tail protein L | - |
HF909_RS09095 () | 1876129..1876839 | + | 711 | WP_193034489.1 | C40 family peptidase | - |
HF909_RS09100 () | 1876863..1877231 | + | 369 | WP_193034490.1 | hypothetical protein | - |
HF909_RS09105 () | 1877292..1877885 | + | 594 | WP_193034491.1 | tail assembly protein | - |
HF909_RS09110 () | 1877915..1881070 | + | 3156 | WP_193034492.1 | host specificity protein J | - |
HF909_RS09115 () | 1881070..1881342 | + | 273 | WP_193034493.1 | hypothetical protein | - |
HF909_RS09120 () | 1881342..1882013 | + | 672 | WP_020748501.1 | hypothetical protein | - |
HF909_RS09125 () | 1882092..1882583 | + | 492 | WP_193034494.1 | glycoside hydrolase family protein | - |
HF909_RS09130 () | 1882583..1882891 | + | 309 | WP_193034495.1 | hypothetical protein | - |
HF909_RS09135 () | 1882894..1883169 | + | 276 | WP_193034496.1 | hypothetical protein | - |
HF909_RS09140 () | 1883169..1883714 | + | 546 | WP_193034497.1 | lysis protein | - |
HF909_RS09145 () | 1883832..1884023 | - | 192 | WP_193034498.1 | hypothetical protein | - |
HF909_RS09150 () | 1884020..1884589 | - | 570 | WP_193034499.1 | hypothetical protein | - |
HF909_RS09155 () | 1884698..1885267 | - | 570 | Protein_1797 | LysM peptidoglycan-binding domain-containing protein | - |
HF909_RS09160 () | 1885519..1885920 | - | 402 | WP_028853163.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
HF909_RS09165 () | 1885987..1886172 | - | 186 | WP_193034500.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
HF909_RS09170 () | 1886604..1886798 | + | 195 | WP_193025429.1 | hypothetical protein | - |
HF909_RS09175 () | 1887041..1889050 | + | 2010 | WP_193025431.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
HF909_RS09180 () | 1889284..1890633 | + | 1350 | WP_193034501.1 | trigger factor | - |
HF909_RS09185 () | 1890663..1891316 | + | 654 | WP_003267806.1 | ATP-dependent Clp protease proteolytic subunit | VF |
HF909_RS09190 () | 1891482..1892756 | + | 1275 | WP_020748515.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
HF909_RS09195 () | 1892927..1895347 | + | 2421 | WP_193034502.1 | endopeptidase La | - |
HF909_RS09200 () | 1895522..1895794 | + | 273 | WP_020748517.1 | HU family DNA-binding protein | - |
HF909_RS09215 () | 1896066..1896236 | - | 171 | WP_158491008.1 | hypothetical protein | - |
HF909_RS09220 () | 1896213..1898159 | + | 1947 | WP_193034503.1 | Chaperone SurA | VF |
HF909_RS09225 () | 1898355..1899047 | - | 693 | WP_138929044.1 | signal peptidase I | - |
HF909_RS09230 () | 1899123..1899743 | - | 621 | WP_193036732.1 | arylesterase | - |
HF909_RS09235 () | 1899826..1900536 | + | 711 | WP_064049388.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
HF909_RS09240 () | 1900549..1902168 | - | 1620 | WP_193034504.1 | glucose-6-phosphate isomerase | - |
HF909_RS09245 () | 1902229..1903824 | - | 1596 | WP_193034505.1 | NAD(P)H-hydrate dehydratase | - |
HF909_RS09250 () | 1903900..1904466 | + | 567 | WP_011001660.1 | winged helix DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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