MGE detailed information
MGE type: Prophage MGE length: 59383 bp
Accession: NZ_CP051158 Location: 3819280..3878662 Organism: Escherichia coli strain 17MR471 Replicon: chromosome
Accession: NZ_CP051158 Location: 3819280..3878662 Organism: Escherichia coli strain 17MR471 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF575_RS17985 () | 3814683..3816215 | + | 1533 | WP_001300486.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha | - |
| HF575_RS17990 () | 3816226..3817614 | + | 1389 | WP_000014036.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | - |
| HF575_RS17995 () | 3817639..3818673 | - | 1035 | WP_001118241.1 | AI-2 transporter TqsA | - |
| HF575_RS18000 () | 3819085..3819264 | + | 180 | Protein_3491 | multidrug transporter subunit MdtJ | - |
| HF575_RS18005 () | 3819280..3819977 | - | 698 | Protein_3492 | IS1 family transposase IS1R | Transposase |
| HF575_RS18010 () | 3820033..3820227 | + | 195 | Protein_3493 | multidrug transporter subunit MdtJ | - |
| HF575_RS18015 () | 3820214..3820543 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| HF575_RS18020 () | 3820582..3821403 | - | 822 | WP_001260865.1 | serine protease | - |
| HF575_RS18025 () | 3821503..3821586 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| HF575_RS18030 () | 3821679..3822002 | - | 324 | WP_032255134.1 | acid resistance repetitive basic protein Asr | - |
| HF575_RS18035 () | 3822399..3823652 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| HF575_RS18040 () | 3823759..3824652 | + | 894 | WP_001019525.1 | Hca operon transcriptional activator HcaR | VF |
| HF575_RS18045 () | 3824787..3826007 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| HF575_RS18050 () | 3826132..3826827 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| HF575_RS18055 () | 3826780..3828072 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| HF575_RS18060 () | 3828231..3828845 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| HF575_RS18065 () | 3828888..3829742 | - | 855 | WP_000526477.1 | dimethyl sulfoxide reductase anchor subunit | - |
| HF575_RS18070 () | 3829744..3830361 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| HF575_RS18075 () | 3830372..3832795 | - | 2424 | WP_072169196.1 | dimethyl sulfoxide reductase subunit A | - |
| HF575_RS18080 () | 3832856..3835282 | - | 2427 | WP_001761878.1 | dimethyl sulfoxide reductase subunit A | - |
| HF575_RS18085 () | 3835481..3835786 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| HF575_RS18090 () | 3835894..3836604 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| HF575_RS18095 () | 3836607..3837167 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| HF575_RS18100 () | 3837202..3837543 | - | 342 | WP_176607788.1 | DUF1283 family protein | - |
| HF575_RS18105 () | 3837678..3838004 | + | 327 | WP_001295395.1 | YnfA family protein | - |
| HF575_RS18110 () | 3838210..3839424 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HF575_RS18115 () | 3839436..3840455 | + | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| HF575_RS18120 () | 3840513..3840623 | + | 111 | WP_021531328.1 | hypothetical protein | - |
| HF575_RS18125 () | 3840643..3841923 | - | 1281 | WP_032266244.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HF575_RS18130 () | 3841958..3842209 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| HF575_RS18135 () | 3842282..3844706 | - | 2425 | Protein_3518 | 3'-5' exoribonuclease | - |
| HF575_RS18140 () | 3844800..3844991 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| HF575_RS18145 () | 3844988..3845176 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HF575_RS18150 () | 3845744..3845962 | - | 219 | WP_001171952.1 | hypothetical protein | - |
| HF575_RS18155 () | 3846122..3846277 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| HF575_RS18160 () | 3846446..3846853 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| HF575_RS18165 () | 3846934..3847161 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| HF575_RS18170 () | 3847145..3847666 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| HF575_RS18175 () | 3847647..3848612 | + | 966 | WP_000054514.1 | hypothetical protein | - |
| HF575_RS18180 () | 3848653..3849075 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| HF575_RS18185 () | 3849072..3849419 | + | 348 | WP_096264793.1 | class I SAM-dependent methyltransferase | - |
| HF575_RS18190 () | 3849430..3850127 | - | 698 | Protein_3529 | IS1 family transposase IS1R | Transposase |
| HF575_RS18195 () | 3850435..3851775 | + | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| HF575_RS18200 () | 3852212..3852544 | - | 333 | WP_001301033.1 | protein FlxA | - |
| HF575_RS18205 () | 3852747..3853052 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| HF575_RS18210 () | 3853077..3853316 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HF575_RS18215 () | 3853316..3853603 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HF575_RS18220 () | 3853675..3854718 | + | 1044 | WP_096264855.1 | DUF968 domain-containing protein | - |
| HF575_RS18225 () | 3854732..3855484 | + | 753 | WP_001047135.1 | antitermination protein | - |
| HF575_RS18230 () | 3855762..3855851 | - | 90 | WP_122987542.1 | hypothetical protein | - |
| HF575_RS18235 () | 3855906..3856118 | - | 213 | WP_024172454.1 | cold shock-like protein CspF | - |
| HF575_RS18240 () | 3856417..3856632 | + | 216 | WP_000066485.1 | cold shock-like protein CspB | - |
| HF575_RS18245 () | 3857386..3857469 | + | 84 | Protein_3540 | holin | - |
| HF575_RS18250 () | 3857584..3857799 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HF575_RS18255 () | 3857804..3858115 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| HF575_RS18260 () | 3858112..3858645 | + | 534 | WP_001409770.1 | lysozyme | - |
| HF575_RS18265 () | 3858642..3859139 | + | 498 | WP_096264879.1 | DUF2514 domain-containing protein | - |
| HF575_RS18270 () | 3859501..3859713 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HF575_RS18275 () | 3859724..3859912 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| HF575_RS18280 () | 3859915..3859980 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| HF575_RS18285 () | 3860060..3860215 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| HF575_RS18290 () | 3860387..3860560 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HF575_RS18295 () | 3860712..3861122 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HF575_RS18300 () | 3861180..3861413 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HF575_RS18305 () | 3861802..3862308 | + | 507 | Protein_3552 | DNA-packaging protein | - |
| HF575_RS18310 () | 3862302..3865553 | + | 3252 | Protein_3553 | host specificity protein J | - |
| HF575_RS18315 () | 3865534..3866040 | + | 507 | Protein_3554 | hypothetical protein | - |
| HF575_RS18320 () | 3866040..3866594 | + | 555 | WP_176607789.1 | tail fiber assembly protein | - |
| HF575_RS18325 () | 3866616..3867584 | + | 969 | WP_176607785.1 | IS5 family transposase IS903B | Transposase |
| HF575_RS18330 () | 3867779..3868369 | - | 591 | WP_032266058.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HF575_RS18335 () | 3868686..3868919 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HF575_RS18340 () | 3868988..3869101 | - | 114 | WP_123002788.1 | hypothetical protein | - |
| HF575_RS18345 () | 3869704..3870987 | + | 1284 | Protein_3560 | MHS family MFS transporter YdfJ | - |
| HF575_RS18350 () | 3871086..3871783 | + | 698 | Protein_3561 | IS1 family transposase IS1R | Transposase |
| HF575_RS18355 () | 3871853..3873313 | + | 1461 | WP_000527813.1 | mannitol dehydrogenase family protein | - |
| HF575_RS18360 () | 3873349..3873552 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HF575_RS18365 () | 3873729..3874415 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| HF575_RS18370 () | 3874504..3875250 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| HF575_RS18375 () | 3875387..3877432 | + | 2046 | WP_001459755.1 | peptidyl-dipeptidase Dcp | - |
| HF575_RS18380 () | 3877477..3877995 | - | 519 | WP_001024745.1 | 2-oxo-tetronate isomerase | - |
| HF575_RS18385 () | 3878270..3878662 | + | 393 | WP_000671735.1 | YdeI family stress tolerance OB fold protein | - |
| HF575_RS18390 () | 3878917..3879807 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| HF575_RS18395 () | 3880026..3880121 | - | 96 | WP_000901367.1 | protein MgtS | - |
| HF575_RS18400 () | 3880248..3881435 | - | 1188 | WP_001054152.1 | efflux MFS transporter YdeE | - |
| HF575_RS18405 () | 3881630..3882529 | + | 900 | WP_000087221.1 | O-acetylserine/cysteine exporter | - |
| HF575_RS18410 () | 3882574..3883272 | - | 699 | WP_000577188.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|