MGE detailed information
MGE type: Genomic_island MGE length: 24460 bp
Accession: NZ_CP051001 Location: 140599..165058 Organism: Escherichia coli O157:H16 str. 98-3133 Replicon: chromosome
Accession: NZ_CP051001 Location: 140599..165058 Organism: Escherichia coli O157:H16 str. 98-3133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BY40_RS00685 (136431) | 136431..137762 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| BY40_RS00690 (137784) | 137784..138773 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| BY40_RS00695 (138872) | 138872..139810 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| BY40_RS00700 (140125) | 140125..140343 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| BY40_RS00705 (140599) | 140599..141138 | + | 540 | WP_000675733.1 | protein YhaB | - |
| BY40_RS00710 (141160) | 141160..142347 | + | 1188 | WP_000484598.1 | YhaC family protein | - |
| BY40_RS00720 (143370) | 143370..144515 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| BY40_RS00725 (144612) | 144612..145502 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| BY40_RS00730 (145532) | 145532..146302 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| BY40_RS00735 (146318) | 146318..147652 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| BY40_RS00740 (148027) | 148027..149598 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| BY40_RS00745 (149747) | 149747..150082 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| BY40_RS00750 (150082) | 150082..150546 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| BY40_RS00755 (150601) | 150601..151410 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| BY40_RS00760 (151659) | 151659..152939 | + | 1281 | Protein_149 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| BY40_RS00765 (152962) | 152962..153435 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BY40_RS00770 (153446) | 153446..154225 | + | 780 | WP_000406209.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| BY40_RS00775 (154215) | 154215..155093 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| BY40_RS00780 (155111) | 155111..155545 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| BY40_RS00785 (155542) | 155542..156675 | + | 1134 | WP_001326623.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| BY40_RS00790 (157026) | 157026..158180 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| BY40_RS00795 (158193) | 158193..159053 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| BY40_RS00800 (159220) | 159220..159696 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| BY40_RS00805 (159735) | 159735..160070 | + | 336 | Protein_158 | PTS sugar transporter subunit IIC | - |
| BY40_RS00810 (160129) | 160129..161280 | + | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| BY40_RS00815 (161288) | 161288..161761 | + | 474 | Protein_160 | PTS sugar transporter subunit IIC | - |
| BY40_RS00820 (161751) | 161751..162542 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| BY40_RS00825 (162543) | 162543..163298 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| BY40_RS00830 (163699) | 163699..164283 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| BY40_RS00835 (164363) | 164363..165058 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| BY40_RS00840 (165087) | 165087..167603 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| BY40_RS00845 (167614) | 167614..168705 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| BY40_RS00850 (168748) | 168748..169608 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|