MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91886 bp
Accession: NZ_CP051000 Location: 1..91886 Organism: Escherichia coli O39:NM str. F8704-2 Replicon: plasmid pF8704-2_3
Accession: NZ_CP051000 Location: 1..91886 Organism: Escherichia coli O39:NM str. F8704-2 Replicon: plasmid pF8704-2_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P411_RS27615 | 841..1305 | + | 465 | WP_100068535.1 | hypothetical protein | - |
| P411_RS27620 | 1368..2530 | + | 1163 | WP_220541715.1 | IS3 family transposase ISEc17 | Transposase |
| P411_RS27625 | 2561..2977 | - | 417 | Protein_3 | IS66 family transposase IS679 | Transposase |
| P411_RS27630 | 2997..3344 | - | 348 | WP_000624606.1 | IS66 family transposase ISCro1 | Transposase |
| P411_RS27635 | 3344..3613 | - | 270 | Protein_5 | IS66 family transposase ISCro1 | Transposase |
| P411_RS28550 | 3600..3998 | + | 399 | WP_001299780.1 | transposase | - |
| P411_RS27650 | 4169..4744 | + | 576 | WP_024184466.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| P411_RS27655 | 4897..6110 | + | 1214 | WP_136952279.1 | IS3 family transposase IS629 | Transposase |
| P411_RS27660 | 6165..7358 | + | 1194 | WP_032361741.1 | IS256 family transposase ISEic2 | Transposase |
| P411_RS27665 | 7664..8251 | + | 588 | WP_000905839.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | VF |
| P411_RS27670 | 8340..8470 | - | 131 | Protein_11 | IS256 family transposase ISEc39 | Transposase |
| P411_RS27675 | 8470..8712 | - | 243 | Protein_12 | IS256 family transposase ISEc39 | Transposase |
| P411_RS27680 | 8926..9153 | - | 228 | Protein_13 | DDE-type integrase/transposase/recombinase | - |
| P411_RS27685 | 9141..9500 | - | 360 | WP_024239173.1 | maturase | - |
| P411_RS27690 | 10330..11538 | - | 1209 | WP_032361739.1 | hypothetical protein | - |
| P411_RS27695 | 11641..12087 | + | 447 | Protein_16 | integrase core domain-containing protein | - |
| P411_RS28555 | 12636..13232 | + | 597 | WP_259407120.1 | hypothetical protein | VF |
| P411_RS28560 | 13244..13753 | + | 510 | WP_259407121.1 | hypothetical protein | VF |
| P411_RS27705 | 13801..14069 | + | 269 | Protein_19 | secretion protein EspT | - |
| P411_RS27710 | 14619..15107 | - | 489 | WP_259407122.1 | hypothetical protein | VF |
| P411_RS27715 | 15380..16021 | + | 642 | WP_024214922.1 | hypothetical protein | VF |
| P411_RS28565 | 16079..16203 | + | 125 | Protein_22 | IS3 family transposase | - |
| P411_RS27720 | 16232..16546 | - | 315 | Protein_23 | IS3 family transposase ISSen1 | Transposase |
| P411_RS27725 | 16609..17285 | + | 677 | Protein_24 | IS66-like element accessory protein TnpA | - |
| P411_RS27730 | 17285..17632 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| P411_RS27735 | 17652..19223 | + | 1572 | WP_220541688.1 | IS66 family transposase ISCro1 | Transposase |
| P411_RS27740 | 19254..19733 | - | 480 | Protein_27 | IS66 family transposase ISEc23 | Transposase |
| P411_RS27745 | 20539..20613 | + | 75 | Protein_28 | IS1 family transposase ISEc30 | Transposase |
| P411_RS28570 | 20598..20899 | - | 302 | Protein_29 | hypothetical protein | - |
| P411_RS27750 | 21212..22425 | + | 1214 | WP_220541656.1 | IS3 family transposase IS629 | Transposase |
| P411_RS28575 | 22459..22596 | + | 138 | Protein_31 | hypothetical protein | - |
| P411_RS27755 | 22836..23027 | + | 192 | Protein_32 | IS21 family transposase IS100kyp | Transposase |
| P411_RS27760 | 23028..23117 | + | 90 | Protein_33 | IS21 family transposase IS100kyp | Transposase |
| P411_RS27765 | 23187..23489 | + | 303 | Protein_34 | IS3 family transposase ISEc31 | Transposase |
| P411_RS27770 | 23686..23970 | - | 285 | WP_032361712.1 | ribbon-helix-helix domain-containing protein | - |
| P411_RS27775 | 24291..24470 | - | 180 | WP_032146765.1 | hypothetical protein | - |
| P411_RS27780 | 24632..25015 | - | 384 | WP_000751992.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| P411_RS27790 | 25352..25965 | + | 614 | Protein_38 | plasmid segregation protein ParM | - |
| P411_RS27795 | 26021..26718 | + | 698 | WP_250114707.1 | IS1 family transposase | - |
| P411_RS27800 | 27291..27988 | + | 698 | WP_259407123.1 | IS1-like element IS1B family transposase | - |
| P411_RS27805 | 28182..28856 | - | 675 | Protein_41 | IS66 family transposase ISEc22 | Transposase |
| P411_RS27810 | 28905..29252 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| P411_RS27815 | 29249..29629 | - | 381 | WP_001466366.1 | IS66 family transposase ISEc8 | Transposase |
| P411_RS27820 | 29724..29921 | - | 198 | Protein_44 | Tn3 family transposase | - |
| P411_RS27825 | 29921..30206 | + | 286 | Protein_45 | IS3 family transposase | - |
| P411_RS27830 | 30208..30441 | + | 234 | WP_032361865.1 | hypothetical protein | - |
| P411_RS27835 | 30657..34544 | - | 3888 | WP_032361866.1 | Serine protease pet autotransporter | VF |
| P411_RS27840 | 35281..35481 | - | 201 | WP_000643553.1 | AggR-activated transcriptional regulator Aar | - |
| P411_RS27850 | 36455..36555 | + | 101 | Protein_50 | IS481 family transposase | - |
| P411_RS27855 | 36565..37146 | - | 582 | WP_001119657.1 | hypothetical protein | VF |
| P411_RS27860 | 37194..37703 | - | 510 | WP_220541716.1 | hypothetical protein | VF |
| P411_RS27865 | 37715..38059 | - | 345 | WP_032361740.1 | hypothetical protein | VF |
| P411_RS27870 | 38861..39124 | - | 264 | Protein_54 | IS3 family transposase ISEc48 | Transposase |
| P411_RS27875 | 39180..39877 | + | 698 | WP_250114707.1 | IS1 family transposase | - |
| P411_RS28580 | 40368..40658 | - | 291 | WP_001435423.1 | hypothetical protein | VF |
| P411_RS28585 | 41544..41840 | - | 297 | Protein_57 | hypothetical protein | VF |
| P411_RS28590 | 41914..42255 | - | 342 | WP_000174728.1 | hypothetical protein | - |
| P411_RS27890 | 42274..42429 | + | 156 | WP_000124108.1 | hypothetical protein | - |
| P411_RS27895 | 42454..42639 | + | 186 | WP_024184467.1 | hypothetical protein | - |
| P411_RS27900 | 42639..43826 | + | 1188 | WP_001299784.1 | IS91 family transposase ISEc37 | Transposase |
| P411_RS27905 | 44093..45306 | + | 1214 | WP_220541656.1 | IS3 family transposase IS629 | Transposase |
| P411_RS28595 | 45458..45640 | - | 183 | Protein_63 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| P411_RS27910 | 45681..49553 | - | 3873 | WP_032361601.1 | hypothetical protein | VF |
| P411_RS27920 | 52103..52960 | - | 858 | WP_000130652.1 | incFII family plasmid replication initiator RepA | - |
| P411_RS27925 | 52953..53027 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| P411_RS27930 | 53263..53520 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| P411_RS27935 | 53883..55045 | + | 1163 | WP_259407118.1 | IS3 family transposase IS629 | Transposase |
| P411_RS27940 | 55088..55516 | - | 429 | Protein_70 | IS66 family transposase ISEc23 | Transposase |
| P411_RS27945 | 55547..55897 | - | 351 | WP_021569153.1 | IS66 family transposase ISEc23 | Transposase |
| P411_RS27950 | 55894..56319 | - | 426 | WP_000422754.1 | IS66 family transposase ISEc23 | Transposase |
| P411_RS27955 | 56531..56909 | - | 379 | Protein_73 | IS3 family transposase IS3F | Transposase |
| P411_RS27960 | 57142..57412 | + | 271 | Protein_74 | transposase | - |
| P411_RS27970 | 57727..58218 | + | 492 | Protein_75 | IS3 family transposase IS2 | Transposase |
| P411_RS27980 | 59575..60087 | + | 513 | WP_021569014.1 | hypothetical protein | VF |
| P411_RS27985 | 60099..63173 | + | 3075 | WP_001142373.1 | hypothetical protein | VF |
| P411_RS27990 | 63245..65368 | + | 2124 | WP_000376537.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| P411_RS27995 | 65387..66823 | + | 1437 | WP_000708193.1 | hypothetical protein | VF |
| P411_RS28000 | 66896..67507 | - | 612 | Protein_81 | IS3 family transposase ISSd1 | Transposase |
| P411_RS28005 | 67509..68381 | - | 873 | Protein_82 | IS30 family transposase IS30D | Transposase |
| P411_RS28600 | 68378..68458 | - | 81 | Protein_83 | hypothetical protein | - |
| P411_RS28010 | 68446..69351 | + | 906 | Protein_84 | IS3 family transposase ISEc31 | Transposase |
| P411_RS28015 | 69321..69671 | - | 351 | WP_000872078.1 | hypothetical protein | - |
| P411_RS28020 | 69668..70386 | - | 719 | Protein_86 | plasmid SOS inhibition protein A | - |
| P411_RS28025 | 70383..70816 | - | 434 | Protein_87 | conjugation system SOS inhibitor PsiB | - |
| P411_RS28030 | 70871..72828 | - | 1958 | Protein_88 | ParB/RepB/Spo0J family partition protein | - |
| P411_RS28035 | 72891..73124 | - | 234 | WP_000005993.1 | DUF905 family protein | - |
| P411_RS28040 | 73216..73605 | - | 390 | WP_259407125.1 | single-stranded DNA-binding protein | - |
| P411_RS28605 | 73653..73706 | - | 54 | Protein_91 | single-stranded DNA-binding protein | - |
| P411_RS28610 | 74006..74420 | + | 415 | Protein_92 | hypothetical protein | - |
| P411_RS28615 | 74506..75068 | - | 563 | Protein_93 | class I SAM-dependent methyltransferase | - |
| P411_RS28055 | 75115..76476 | - | 1362 | WP_000170650.1 | DUF3560 domain-containing protein | - |
| P411_RS28060 | 76528..76758 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| P411_RS28620 | 77256..77520 | + | 265 | Protein_96 | hypothetical protein | - |
| P411_RS28070 | 77713..77892 | - | 180 | WP_032361300.1 | hypothetical protein | - |
| P411_RS28075 | 77889..78311 | - | 423 | WP_000271766.1 | DUF1380 family protein | - |
| P411_RS28080 | 78358..78621 | - | 264 | Protein_99 | antirestriction protein | - |
| P411_RS28085 | 78637..79753 | + | 1117 | Protein_100 | translesion error-prone DNA polymerase V subunit UmuC | - |
| P411_RS28090 | 79894..80856 | - | 963 | WP_000756323.1 | ParB family protein | - |
| P411_RS28095 | 80853..82058 | - | 1206 | WP_000817645.1 | hypothetical protein | VF |
| P411_RS28100 | 82432..82644 | + | 213 | WP_000402946.1 | hypothetical protein | - |
| P411_RS28105 | 82818..83069 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| P411_RS28110 | 83066..83353 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P411_RS28115 | 83358..83630 | + | 273 | Protein_106 | DDE-type integrase/transposase/recombinase | - |
| P411_RS28120 | 83647..84330 | - | 684 | Protein_107 | IS3 family transposase ISEc31 | Transposase |
| P411_RS28125 | 84368..85906 | - | 1539 | WP_165899070.1 | IS66 family transposase ISEc22 | Transposase |
| P411_RS28130 | 85955..86302 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| P411_RS28135 | 86299..86679 | - | 381 | WP_001466366.1 | IS66 family transposase ISEc8 | Transposase |
| P411_RS28140 | 87106..88083 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| P411_RS28145 | 88320..89060 | - | 741 | WP_032361861.1 | IS91 family transposase ISMno23 | Transposase |
| P411_RS28150 | 89181..89351 | - | 171 | WP_064716802.1 | hypothetical protein | - |
| P411_RS28625 | 89376..89750 | + | 375 | Protein_114 | epoxyqueuosine reductase QueH | - |
| P411_RS28155 | 90480..90698 | + | 219 | Protein_115 | transposase | - |
| P411_RS28630 | 90914..91186 | + | 273 | Protein_116 | secretion protein EspO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|