MGE detailed information
MGE type: Prophage MGE length: 35772 bp
Accession: NZ_CP050865 Location: 1675226..1710997 Organism: Escherichia coli strain 8-3-Ti3 Replicon: chromosome
Accession: NZ_CP050865 Location: 1675226..1710997 Organism: Escherichia coli strain 8-3-Ti3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFC66_RS08415 () | 1670905..1671699 | + | 795 | WP_000734287.1 | adenosylmethionine decarboxylase | - |
| HFC66_RS08420 () | 1671737..1672099 | - | 363 | WP_032360043.1 | protein YacL | - |
| HFC66_RS08425 () | 1672274..1674871 | - | 2598 | WP_001307570.1 | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | - |
| HFC66_RS08430 () | 1675226..1676293 | + | 1068 | Protein_1645 | DUF3300 domain-containing protein | - |
| HFC66_RS08435 () | 1676507..1676587 | + | 81 | Protein_1646 | integrase | - |
| HFC66_RS08440 () | 1676597..1676683 | - | 87 | Protein_1647 | transposase | - |
| HFC66_RS08445 () | 1676775..1678538 | + | 1764 | WP_000801163.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| HFC66_RS26380 () | 1678539..1678718 | - | 180 | WP_001039895.1 | hypothetical protein | - |
| HFC66_RS08450 () | 1678718..1679341 | - | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| HFC66_RS08455 () | 1679292..1680560 | - | 1269 | WP_001343146.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HFC66_RS08460 () | 1680584..1681129 | - | 546 | WP_032359688.1 | tail fiber assembly protein | - |
| HFC66_RS08465 () | 1681632..1681787 | - | 156 | Protein_1653 | transposase domain-containing protein | - |
| HFC66_RS08475 () | 1683140..1683736 | - | 597 | WP_004996416.1 | hypothetical protein | - |
| HFC66_RS08480 () | 1683939..1684406 | - | 468 | WP_167839448.1 | lysis protein | - |
| HFC66_RS08485 () | 1684403..1684900 | - | 498 | WP_032359927.1 | lysozyme RrrD | - |
| HFC66_RS08490 () | 1684900..1685115 | - | 216 | WP_000839570.1 | class II holin family protein | - |
| HFC66_RS08505 () | 1685609..1686232 | - | 624 | WP_001235461.1 | antitermination protein | - |
| HFC66_RS08510 () | 1686229..1686417 | - | 189 | WP_000994516.1 | protein ninH | - |
| HFC66_RS08515 () | 1686414..1686776 | - | 363 | WP_073840903.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HFC66_RS08520 () | 1686773..1687543 | - | 771 | WP_001344365.1 | phage antirepressor Ant | - |
| HFC66_RS08525 () | 1687558..1687794 | - | 237 | Protein_1663 | Rha family transcriptional regulator | - |
| HFC66_RS08530 () | 1687869..1688573 | - | 705 | WP_073840904.1 | ORF6N domain-containing protein | - |
| HFC66_RS08535 () | 1688624..1688849 | - | 226 | Protein_1665 | ash family protein | - |
| HFC66_RS08540 () | 1688895..1689224 | + | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFC66_RS08545 () | 1689214..1689522 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| HFC66_RS08550 () | 1689564..1689740 | - | 177 | WP_001254220.1 | NinE family protein | - |
| HFC66_RS08555 () | 1689737..1690177 | - | 441 | WP_000736913.1 | recombination protein NinB | - |
| HFC66_RS08560 () | 1690255..1693161 | - | 2907 | WP_073840460.1 | toprim domain-containing protein | - |
| HFC66_RS08565 () | 1693392..1693829 | - | 438 | Protein_1671 | helix-turn-helix domain-containing protein | - |
| HFC66_RS08570 () | 1694059..1695255 | + | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| HFC66_RS08575 () | 1695280..1695618 | - | 339 | Protein_1673 | helix-turn-helix domain-containing protein | - |
| HFC66_RS08580 () | 1695781..1696080 | - | 300 | WP_167840431.1 | hypothetical protein | - |
| HFC66_RS08585 () | 1696219..1696443 | - | 225 | WP_024196828.1 | helix-turn-helix domain-containing protein | - |
| HFC66_RS08590 () | 1696555..1697262 | + | 708 | WP_000846391.1 | helix-turn-helix transcriptional regulator | - |
| HFC66_RS08595 () | 1697300..1697641 | + | 342 | WP_000885926.1 | DUF3024 domain-containing protein | - |
| HFC66_RS08600 () | 1698173..1698364 | + | 192 | WP_000035314.1 | hypothetical protein | - |
| HFC66_RS08605 () | 1699169..1699573 | + | 405 | WP_073849761.1 | antitermination protein | - |
| HFC66_RS08610 () | 1699602..1700299 | + | 698 | Protein_1680 | IS1 family transposase IS1X2 | Transposase |
| HFC66_RS08615 () | 1700564..1701261 | + | 698 | Protein_1681 | IS1 family transposase IS1X2 | Transposase |
| HFC66_RS08620 () | 1701383..1701523 | + | 141 | WP_001198866.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| HFC66_RS08625 () | 1701516..1701659 | + | 144 | WP_038341317.1 | host cell division inhibitory peptide Kil | - |
| HFC66_RS08630 () | 1701735..1702031 | + | 297 | WP_020241285.1 | host-nuclease inhibitor protein Gam | - |
| HFC66_RS08635 () | 1702037..1702822 | + | 786 | WP_073840457.1 | phage recombination protein Bet | - |
| HFC66_RS08640 () | 1702819..1703499 | + | 681 | Protein_1686 | YqaJ viral recombinase family protein | - |
| HFC66_RS08645 () | 1703496..1703609 | + | 114 | WP_167839450.1 | DUF1317 family protein | - |
| HFC66_RS08650 () | 1703660..1704850 | + | 1191 | WP_001111632.1 | IS4 family transposase ISEc60 | Transposase |
| HFC66_RS08655 () | 1704872..1704958 | + | 87 | Protein_1689 | DUF1317 family protein | - |
| HFC66_RS26490 () | 1704955..1705050 | + | 96 | Protein_1690 | adenine methyltransferase | - |
| HFC66_RS08660 () | 1705077..1705850 | + | 774 | WP_073840456.1 | ead/Ea22-like family protein | - |
| HFC66_RS08665 () | 1705929..1706651 | + | 723 | WP_000247838.1 | hypothetical protein | - |
| HFC66_RS08670 () | 1706982..1707605 | + | 624 | WP_052994181.1 | antA/AntB antirepressor family protein | - |
| HFC66_RS08675 () | 1707690..1707908 | + | 219 | WP_001303849.1 | excisionase | - |
| HFC66_RS08680 () | 1707997..1709153 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| HFC66_RS08685 () | 1709165..1710223 | + | 1059 | WP_073849439.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HFC66_RS08690 () | 1710296..1710997 | + | 702 | Protein_1697 | DUF3300 domain-containing protein | - |
| HFC66_RS08695 () | 1711068..1712492 | - | 1425 | WP_000102485.1 | dihydrolipoyl dehydrogenase | - |
| HFC66_RS08700 () | 1712817..1714709 | - | 1893 | WP_032205915.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|