MGE detailed information
MGE type: Prophage MGE length: 35772 bp
Accession: NZ_CP050862 Location: 3427604..3463375 Organism: Escherichia coli strain 8-3-DC15 Replicon: chromosome
Accession: NZ_CP050862 Location: 3427604..3463375 Organism: Escherichia coli strain 8-3-DC15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFC67_RS17560 () | 3423283..3424077 | + | 795 | WP_000734287.1 | adenosylmethionine decarboxylase | - |
| HFC67_RS17565 () | 3424115..3424477 | - | 363 | WP_032360043.1 | protein YacL | - |
| HFC67_RS17570 () | 3424652..3427249 | - | 2598 | WP_001307570.1 | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | - |
| HFC67_RS17575 () | 3427604..3428671 | + | 1068 | Protein_3429 | DUF3300 domain-containing protein | - |
| HFC67_RS17580 () | 3428885..3428965 | + | 81 | Protein_3430 | integrase | - |
| HFC67_RS17585 () | 3428975..3429061 | - | 87 | Protein_3431 | transposase | - |
| HFC67_RS17590 () | 3429153..3430916 | + | 1764 | WP_000801163.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| HFC67_RS26430 () | 3430917..3431096 | - | 180 | WP_001039895.1 | hypothetical protein | - |
| HFC67_RS17595 () | 3431096..3431719 | - | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| HFC67_RS17600 () | 3431670..3432938 | - | 1269 | WP_001343146.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HFC67_RS17605 () | 3432962..3433507 | - | 546 | WP_032359688.1 | tail fiber assembly protein | - |
| HFC67_RS17610 () | 3434010..3434165 | - | 156 | Protein_3437 | transposase domain-containing protein | - |
| HFC67_RS17620 () | 3435518..3436114 | - | 597 | WP_004996416.1 | hypothetical protein | - |
| HFC67_RS17625 () | 3436317..3436784 | - | 468 | WP_167839448.1 | lysis protein | - |
| HFC67_RS17630 () | 3436781..3437278 | - | 498 | WP_032359927.1 | lysozyme RrrD | - |
| HFC67_RS17635 () | 3437278..3437493 | - | 216 | WP_000839570.1 | class II holin family protein | - |
| HFC67_RS17650 () | 3437987..3438610 | - | 624 | WP_001235461.1 | antitermination protein | - |
| HFC67_RS17655 () | 3438607..3438795 | - | 189 | WP_000994516.1 | protein ninH | - |
| HFC67_RS17660 () | 3438792..3439154 | - | 363 | WP_073840903.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HFC67_RS17665 () | 3439151..3439921 | - | 771 | WP_001344365.1 | phage antirepressor Ant | - |
| HFC67_RS17670 () | 3439936..3440172 | - | 237 | Protein_3447 | Rha family transcriptional regulator | - |
| HFC67_RS17675 () | 3440247..3440951 | - | 705 | WP_073840904.1 | ORF6N domain-containing protein | - |
| HFC67_RS17680 () | 3441002..3441227 | - | 226 | Protein_3449 | ash family protein | - |
| HFC67_RS17685 () | 3441273..3441602 | + | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFC67_RS17690 () | 3441592..3441900 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| HFC67_RS17695 () | 3441942..3442118 | - | 177 | WP_001254220.1 | NinE family protein | - |
| HFC67_RS17700 () | 3442115..3442555 | - | 441 | WP_000736913.1 | recombination protein NinB | - |
| HFC67_RS17705 () | 3442633..3445539 | - | 2907 | WP_073840460.1 | toprim domain-containing protein | - |
| HFC67_RS17710 () | 3445770..3446207 | - | 438 | Protein_3455 | helix-turn-helix domain-containing protein | - |
| HFC67_RS17715 () | 3446437..3447633 | + | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| HFC67_RS17720 () | 3447658..3447996 | - | 339 | Protein_3457 | helix-turn-helix domain-containing protein | - |
| HFC67_RS17725 () | 3448159..3448458 | - | 300 | WP_167839449.1 | hypothetical protein | - |
| HFC67_RS17730 () | 3448597..3448821 | - | 225 | WP_024196828.1 | helix-turn-helix domain-containing protein | - |
| HFC67_RS17735 () | 3448933..3449640 | + | 708 | WP_000846391.1 | helix-turn-helix transcriptional regulator | - |
| HFC67_RS17740 () | 3449678..3450019 | + | 342 | WP_000885926.1 | DUF3024 domain-containing protein | - |
| HFC67_RS17745 () | 3450551..3450742 | + | 192 | WP_000035314.1 | hypothetical protein | - |
| HFC67_RS17750 () | 3451547..3451951 | + | 405 | WP_073849761.1 | antitermination protein | - |
| HFC67_RS17755 () | 3451980..3452677 | + | 698 | Protein_3464 | IS1 family transposase IS1X2 | Transposase |
| HFC67_RS17760 () | 3452942..3453639 | + | 698 | Protein_3465 | IS1 family transposase IS1X2 | Transposase |
| HFC67_RS17765 () | 3453761..3453901 | + | 141 | WP_001198866.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| HFC67_RS17770 () | 3453894..3454037 | + | 144 | WP_038341317.1 | host cell division inhibitory peptide Kil | - |
| HFC67_RS17775 () | 3454113..3454409 | + | 297 | WP_020241285.1 | host-nuclease inhibitor protein Gam | - |
| HFC67_RS17780 () | 3454415..3455200 | + | 786 | WP_073840457.1 | phage recombination protein Bet | - |
| HFC67_RS17785 () | 3455197..3455877 | + | 681 | Protein_3470 | YqaJ viral recombinase family protein | - |
| HFC67_RS17790 () | 3455874..3455987 | + | 114 | WP_167839450.1 | DUF1317 family protein | - |
| HFC67_RS17795 () | 3456038..3457228 | + | 1191 | WP_001111632.1 | IS4 family transposase ISEc60 | Transposase |
| HFC67_RS17800 () | 3457250..3457336 | + | 87 | Protein_3473 | DUF1317 family protein | - |
| HFC67_RS26510 () | 3457333..3457428 | + | 96 | Protein_3474 | adenine methyltransferase | - |
| HFC67_RS17805 () | 3457455..3458228 | + | 774 | WP_073840456.1 | ead/Ea22-like family protein | - |
| HFC67_RS17810 () | 3458307..3459029 | + | 723 | WP_000247838.1 | hypothetical protein | - |
| HFC67_RS17815 () | 3459360..3459983 | + | 624 | WP_052994181.1 | antA/AntB antirepressor family protein | - |
| HFC67_RS17820 () | 3460068..3460286 | + | 219 | WP_001303849.1 | excisionase | - |
| HFC67_RS17825 () | 3460375..3461531 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| HFC67_RS17830 () | 3461543..3462601 | + | 1059 | WP_073849439.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HFC67_RS17835 () | 3462674..3463375 | + | 702 | Protein_3481 | DUF3300 domain-containing protein | - |
| HFC67_RS17840 () | 3463446..3464870 | - | 1425 | WP_000102485.1 | dihydrolipoyl dehydrogenase | - |
| HFC67_RS17845 () | 3465195..3467087 | - | 1893 | WP_032205915.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|