MGE detailed information
MGE type: IS/Tn MGE length: 504 bp
Accession: NZ_CP050862 Location: 1564303..1564806 Organism: Escherichia coli strain 8-3-DC15 Replicon: chromosome
Accession: NZ_CP050862 Location: 1564303..1564806 Organism: Escherichia coli strain 8-3-DC15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFC67_RS08045 () | 1559667..1559897 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HFC67_RS08050 () | 1560036..1560410 | + | 375 | WP_066018956.1 | CopC domain-containing protein YobA | - |
| HFC67_RS08055 () | 1560414..1561286 | + | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| HFC67_RS08060 () | 1561299..1561640 | + | 342 | WP_073849646.1 | YebY family protein | - |
| - () | 1561670..1561901 | - | 232 | - | - | Antitoxin Detail |
| - () | 1561797..1561900 | + | 104 | - | - | Toxin Detail |
| HFC67_RS08065 () | 1562022..1563098 | - | 1077 | WP_052993702.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| HFC67_RS08070 () | 1563064..1563345 | - | 282 | WP_005127484.1 | excisionase | - |
| HFC67_RS08075 () | 1563452..1563640 | - | 189 | WP_000276806.1 | DUF1187 family protein | - |
| - () | 1563456..1563634 | + | 179 | NuclAT_1 | - | - |
| - () | 1563456..1563634 | + | 179 | NuclAT_1 | - | - |
| - () | 1563456..1563634 | + | 179 | NuclAT_1 | - | - |
| - () | 1563456..1563634 | + | 179 | NuclAT_1 | - | - |
| HFC67_RS08080 () | 1563680..1564285 | - | 606 | Protein_1572 | hypothetical protein | - |
| HFC67_RS08085 () | 1564303..1565000 | - | 698 | Protein_1573 | IS1 family transposase IS1X2 | Transposase |
| HFC67_RS08090 () | 1565043..1565249 | + | 207 | Protein_1574 | hypothetical protein | - |
| HFC67_RS08100 () | 1565844..1566056 | + | 213 | WP_000935258.1 | type I toxin-antitoxin system Hok family toxin | - |
| HFC67_RS08105 () | 1566224..1566502 | + | 279 | WP_000929754.1 | hypothetical protein | - |
| HFC67_RS08110 () | 1566504..1567562 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| HFC67_RS08115 () | 1567563..1567928 | + | 366 | WP_073849795.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HFC67_RS08120 () | 1567925..1568608 | + | 684 | WP_032359563.1 | antiterminator | - |
| HFC67_RS08145 () | 1569409..1569624 | + | 216 | WP_000839572.1 | class II holin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|