MGE detailed information
MGE type: Prophage MGE length: 131811 bp
Accession: NZ_CP050862 Location: 1484914..1616724 Organism: Escherichia coli strain 8-3-DC15 Replicon: chromosome
Accession: NZ_CP050862 Location: 1484914..1616724 Organism: Escherichia coli strain 8-3-DC15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFC67_RS07600 () | 1480227..1481327 | + | 1101 | WP_001214312.1 | NapC/NirT family cytochrome c | - |
| HFC67_RS07605 () | 1481352..1483781 | + | 2430 | WP_073849799.1 | trimethylamine N-oxide reductase TorZ | - |
| HFC67_RS07610 () | 1483946..1484917 | - | 972 | WP_000564746.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| HFC67_RS07615 () | 1484914..1485657 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| HFC67_RS07620 () | 1485698..1486093 | - | 396 | WP_000252979.1 | MAPEG family protein | - |
| HFC67_RS07625 () | 1486146..1486916 | - | 771 | WP_046880181.1 | DUF72 domain-containing protein | - |
| HFC67_RS07630 () | 1486898..1488103 | - | 1206 | Protein_1480 | UvrABC system protein C ; Integrase | Integrase |
| HFC67_RS07635 () | 1488168..1489324 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| HFC67_RS07640 () | 1489433..1489726 | - | 294 | WP_000867913.1 | hypothetical protein | - |
| HFC67_RS07645 () | 1489846..1490553 | + | 708 | WP_004998217.1 | Rha family transcriptional regulator | - |
| HFC67_RS07650 () | 1490573..1490749 | + | 177 | WP_001197745.1 | DUF4222 domain-containing protein | - |
| HFC67_RS07655 () | 1490771..1491130 | - | 360 | WP_001300492.1 | transcriptional regulator | - |
| HFC67_RS07660 () | 1491132..1491419 | - | 288 | WP_001141116.1 | hypothetical protein | - |
| HFC67_RS07665 () | 1491384..1492337 | + | 954 | WP_072147912.1 | Rha family phage regulatory protein | - |
| HFC67_RS07670 () | 1492334..1492567 | + | 234 | WP_000618005.1 | hypothetical protein | - |
| HFC67_RS07675 () | 1492554..1493462 | + | 909 | WP_001247839.1 | hypothetical protein | - |
| HFC67_RS07680 () | 1493473..1494351 | + | 879 | WP_039072146.1 | ATP-binding protein | - |
| HFC67_RS07685 () | 1494348..1495739 | + | 1392 | WP_152066920.1 | replicative DNA helicase | - |
| HFC67_RS07690 () | 1495736..1495993 | + | 258 | WP_001064800.1 | hypothetical protein | - |
| HFC67_RS07695 () | 1495993..1496367 | + | 375 | WP_001215511.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HFC67_RS07700 () | 1496364..1497185 | + | 822 | WP_000762890.1 | antitermination protein | - |
| HFC67_RS07710 () | 1497780..1498115 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| HFC67_RS07715 () | 1498376..1498564 | + | 189 | WP_000874243.1 | DUF1737 domain-containing protein | - |
| HFC67_RS07720 () | 1498561..1498722 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| HFC67_RS07725 () | 1498872..1499087 | + | 216 | WP_005014140.1 | class II holin family protein | - |
| HFC67_RS07730 () | 1499092..1499622 | + | 531 | WP_000193253.1 | YdfR family protein | - |
| HFC67_RS07735 () | 1499944..1500477 | + | 534 | WP_001101166.1 | lysozyme | - |
| HFC67_RS07740 () | 1500698..1500811 | + | 114 | WP_001300378.1 | hypothetical protein | - |
| HFC67_RS07745 () | 1500813..1501250 | + | 438 | WP_073840897.1 | lysis protein | - |
| HFC67_RS26360 () | 1501385..1501458 | + | 74 | Protein_1503 | Rha family transcriptional regulator | - |
| HFC67_RS07750 () | 1501453..1501974 | + | 522 | WP_001028468.1 | KilA-N domain-containing protein | - |
| HFC67_RS07755 () | 1502114..1502290 | - | 177 | WP_001205133.1 | hypothetical protein | - |
| HFC67_RS07760 () | 1502648..1503142 | + | 495 | WP_000373425.1 | DUF1441 family protein | - |
| HFC67_RS07765 () | 1503142..1505244 | + | 2103 | WP_073840795.1 | phage terminase large subunit family protein | - |
| HFC67_RS07770 () | 1505241..1505453 | + | 213 | WP_096854639.1 | hypothetical protein | - |
| HFC67_RS07775 () | 1505453..1506958 | + | 1506 | WP_073849815.1 | phage portal protein | - |
| HFC67_RS07780 () | 1506903..1508963 | + | 2061 | WP_167839361.1 | Clp protease ClpP | - |
| HFC67_RS07785 () | 1509050..1509373 | + | 324 | WP_001097044.1 | DUF2190 family protein | - |
| HFC67_RS07790 () | 1509366..1509641 | + | 276 | WP_001283156.1 | DNA breaking-rejoining protein | - |
| HFC67_RS07795 () | 1509653..1510237 | + | 585 | WP_000677136.1 | phage tail protein | - |
| HFC67_RS07800 () | 1510234..1510635 | + | 402 | WP_073840798.1 | phage minor tail U family protein | - |
| HFC67_RS07805 () | 1510646..1511386 | + | 741 | WP_073840799.1 | phage tail protein | - |
| HFC67_RS07810 () | 1511445..1511564 | + | 120 | Protein_1516 | phage minor tail protein G | - |
| HFC67_RS07820 () | 1512823..1513098 | + | 276 | Protein_1518 | phage minor tail protein G | - |
| HFC67_RS07825 () | 1513107..1513436 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| HFC67_RS07830 () | 1513408..1515486 | + | 2079 | Protein_1520 | phage tail tape measure protein | - |
| HFC67_RS07840 () | 1516745..1517716 | + | 972 | Protein_1522 | phage tail tape measure protein | - |
| HFC67_RS07845 () | 1517716..1518045 | + | 330 | WP_000447385.1 | phage tail protein | - |
| HFC67_RS07850 () | 1518045..1518743 | + | 699 | WP_001152598.1 | phage minor tail protein L | - |
| HFC67_RS07855 () | 1518748..1519491 | + | 744 | WP_000194736.1 | C40 family peptidase | - |
| HFC67_RS07860 () | 1519428..1520030 | + | 603 | WP_000090878.1 | tail assembly protein | - |
| HFC67_RS26365 () | 1520091..1522031 | + | 1941 | WP_194240849.1 | host specificity protein J | - |
| HFC67_RS26485 () | 1521985..1523517 | + | 1533 | WP_194240850.1 | host specificity protein J | - |
| HFC67_RS07870 () | 1523585..1524184 | + | 600 | WP_073850003.1 | hypothetical protein | VF |
| HFC67_RS07875 () | 1524296..1525468 | + | 1173 | WP_000952382.1 | IS21 family transposase IS21 | Transposase |
| HFC67_RS07880 () | 1525468..1526265 | + | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| HFC67_RS07885 () | 1526382..1527797 | + | 1416 | WP_167839378.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HFC67_RS07890 () | 1527748..1528371 | + | 624 | WP_134889552.1 | DUF4376 domain-containing protein | - |
| HFC67_RS26370 () | 1528371..1528550 | + | 180 | WP_001039888.1 | hypothetical protein | - |
| HFC67_RS07895 () | 1528551..1530302 | - | 1752 | WP_134889547.1 | putative enoyl-CoA hydratase echA12 | VF |
| HFC67_RS07900 () | 1530551..1531747 | - | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| HFC67_RS07905 () | 1532352..1532600 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| HFC67_RS07910 () | 1532955..1533494 | - | 540 | WP_073849802.1 | hydrolase | - |
| HFC67_RS07915 () | 1533804..1535576 | + | 1773 | WP_032359833.1 | aspartate--tRNA ligase | - |
| HFC67_RS07920 () | 1535694..1536146 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| HFC67_RS07925 () | 1536175..1536915 | + | 741 | WP_000907248.1 | Peptidoglycan endopeptidase RipA | VF |
| HFC67_RS07930 () | 1536950..1537471 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HFC67_RS07935 () | 1537473..1538075 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| HFC67_RS07940 () | 1538145..1538222 | + | 78 | WP_073841050.1 | stress response small protein YobI | - |
| HFC67_RS07945 () | 1538256..1538953 | + | 698 | Protein_1545 | IS1 family transposase IS1X2 | Transposase |
| HFC67_RS07950 () | 1539126..1539737 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| HFC67_RS07955 () | 1539746..1540756 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HFC67_RS07960 () | 1540806..1541591 | - | 786 | WP_000571464.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 | VF |
| HFC67_RS07965 () | 1541588..1542343 | - | 756 | WP_000202996.1 | Enoyl-[acyl-carrier-protein] reductase [NADH] | VF |
| HFC67_RS07970 () | 1542422..1543354 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HFC67_RS07975 () | 1543370..1544692 | + | 1323 | WP_167839379.1 | murein DD-endopeptidase MepM | - |
| HFC67_RS07980 () | 1544812..1545783 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| HFC67_RS07985 () | 1545914..1547356 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| HFC67_RS07990 () | 1547484..1548353 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| HFC67_RS07995 () | 1548691..1550166 | + | 1476 | WP_032359397.1 | glucose-6-phosphate dehydrogenase | - |
| HFC67_RS08000 () | 1550401..1552212 | + | 1812 | WP_001687627.1 | phosphogluconate dehydratase | - |
| HFC67_RS08005 () | 1552249..1552890 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HFC67_RS08010 () | 1552946..1554124 | - | 1179 | WP_032359393.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HFC67_RS08015 () | 1554258..1554548 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| HFC67_RS08020 () | 1554615..1554971 | + | 357 | WP_001295500.1 | protein YebF | - |
| HFC67_RS08025 () | 1555298..1555957 | + | 660 | WP_032359392.1 | tellurite resistance TerB family protein | - |
| HFC67_RS08030 () | 1556166..1558226 | + | 2061 | WP_167839380.1 | oligopeptidase B | - |
| HFC67_RS08035 () | 1558223..1558885 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| HFC67_RS08040 () | 1558909..1559565 | - | 657 | WP_032359391.1 | carbon-nitrogen hydrolase family protein | - |
| HFC67_RS08045 () | 1559667..1559897 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HFC67_RS08050 () | 1560036..1560410 | + | 375 | WP_066018956.1 | CopC domain-containing protein YobA | - |
| HFC67_RS08055 () | 1560414..1561286 | + | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| HFC67_RS08060 () | 1561299..1561640 | + | 342 | WP_073849646.1 | YebY family protein | - |
| - () | 1561670..1561901 | - | 232 | - | - | Antitoxin Detail |
| - () | 1561797..1561900 | + | 104 | - | - | Toxin Detail |
| HFC67_RS08065 () | 1562022..1563098 | - | 1077 | WP_052993702.1 | UDP-N-acetylbacillosamine N-acetyltransferase ; Integrase | Integrase |
| HFC67_RS08070 () | 1563064..1563345 | - | 282 | WP_005127484.1 | excisionase | - |
| HFC67_RS08075 () | 1563452..1563640 | - | 189 | WP_000276806.1 | DUF1187 family protein | - |
| - () | 1563456..1563634 | + | 179 | NuclAT_1 | - | - |
| - () | 1563456..1563634 | + | 179 | NuclAT_1 | - | - |
| - () | 1563456..1563634 | + | 179 | NuclAT_1 | - | - |
| - () | 1563456..1563634 | + | 179 | NuclAT_1 | - | - |
| HFC67_RS08080 () | 1563680..1564285 | - | 606 | Protein_1572 | hypothetical protein | - |
| HFC67_RS08085 () | 1564303..1565000 | - | 698 | Protein_1573 | IS1 family transposase IS1X2 | Transposase |
| HFC67_RS08090 () | 1565043..1565249 | + | 207 | Protein_1574 | hypothetical protein | - |
| HFC67_RS08100 () | 1565844..1566056 | + | 213 | WP_000935258.1 | type I toxin-antitoxin system Hok family toxin | - |
| HFC67_RS08105 () | 1566224..1566502 | + | 279 | WP_000929754.1 | hypothetical protein | - |
| HFC67_RS08110 () | 1566504..1567562 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| HFC67_RS08115 () | 1567563..1567928 | + | 366 | WP_073849795.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HFC67_RS08120 () | 1567925..1568608 | + | 684 | WP_032359563.1 | antiterminator | - |
| HFC67_RS08145 () | 1569409..1569624 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| HFC67_RS08150 () | 1569624..1570121 | + | 498 | WP_000075173.1 | lysozyme RrrD | - |
| HFC67_RS08155 () | 1570118..1570588 | + | 471 | WP_000092288.1 | lysis protein | - |
| HFC67_RS08160 () | 1570677..1571189 | - | 513 | WP_011069285.1 | VTT domain-containing protein | - |
| HFC67_RS08165 () | 1571384..1572148 | + | 765 | WP_001118113.1 | hypothetical protein | - |
| HFC67_RS08170 () | 1572099..1573502 | + | 1404 | WP_001300443.1 | PBSX family phage terminase large subunit | - |
| HFC67_RS08175 () | 1573502..1574968 | + | 1467 | WP_000113499.1 | DUF1073 domain-containing protein | - |
| HFC67_RS08180 () | 1574859..1575602 | + | 744 | WP_000184977.1 | minor capsid protein | - |
| HFC67_RS08185 () | 1575606..1576397 | + | 792 | Protein_1588 | DUF2213 domain-containing protein | - |
| HFC67_RS08190 () | 1576460..1577616 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| HFC67_RS08195 () | 1577659..1578093 | + | 435 | Protein_1590 | hypothetical protein | - |
| HFC67_RS08200 () | 1578097..1578603 | + | 507 | WP_001066732.1 | hypothetical protein | - |
| HFC67_RS08205 () | 1578615..1579556 | + | 942 | WP_000627472.1 | DUF2184 domain-containing protein | - |
| HFC67_RS08210 () | 1579553..1579786 | - | 234 | WP_162147612.1 | hypothetical protein | - |
| HFC67_RS08215 () | 1579785..1580192 | + | 408 | WP_073840768.1 | DUF4054 domain-containing protein | - |
| HFC67_RS08220 () | 1580189..1580743 | + | 555 | WP_000008721.1 | hypothetical protein | - |
| HFC67_RS08225 () | 1580730..1581119 | + | 390 | WP_001142480.1 | hypothetical protein | - |
| HFC67_RS08230 () | 1581094..1581657 | + | 564 | WP_000503649.1 | hypothetical protein | - |
| HFC67_RS08235 () | 1581661..1582806 | + | 1146 | WP_073840769.1 | DUF3383 family protein | - |
| HFC67_RS08240 () | 1582817..1583257 | + | 441 | WP_000109251.1 | DUF3277 family protein | - |
| HFC67_RS08245 () | 1583261..1583713 | + | 453 | WP_000393947.1 | hypothetical protein | - |
| HFC67_RS08250 () | 1583891..1585843 | + | 1953 | WP_073840770.1 | lytic transglycosylase catalytic | - |
| HFC67_RS08255 () | 1585843..1586493 | + | 651 | WP_000346976.1 | hypothetical protein | - |
| HFC67_RS08260 () | 1586497..1586799 | + | 303 | WP_000648662.1 | hypothetical protein | - |
| HFC67_RS08265 () | 1586802..1587842 | + | 1041 | WP_000042295.1 | hypothetical protein | - |
| HFC67_RS08270 () | 1587898..1588595 | + | 698 | Protein_1605 | IS1 family transposase IS1S | Transposase |
| HFC67_RS08275 () | 1588890..1589231 | + | 342 | WP_000719142.1 | hypothetical protein | - |
| HFC67_RS08280 () | 1589340..1590092 | + | 753 | WP_001145369.1 | hypothetical protein | - |
| HFC67_RS08285 () | 1590092..1590445 | + | 354 | WP_001270635.1 | hypothetical protein | - |
| HFC67_RS08290 () | 1590474..1591670 | + | 1197 | WP_073840772.1 | baseplate J/gp47 family protein | - |
| HFC67_RS08295 () | 1591667..1592347 | + | 681 | WP_038341129.1 | DUF2612 domain-containing protein | - |
| HFC67_RS08300 () | 1592347..1593603 | + | 1257 | WP_073840773.1 | phage tail protein | - |
| HFC67_RS26375 () | 1593606..1593737 | + | 132 | Protein_1612 | tail fiber assembly protein | - |
| HFC67_RS08310 () | 1593794..1594491 | + | 698 | Protein_1613 | IS1 family transposase IS1X2 | Transposase |
| HFC67_RS08315 () | 1594508..1594927 | + | 420 | Protein_1614 | tail fiber assembly protein | - |
| HFC67_RS08320 () | 1594951..1596219 | + | 1269 | WP_001343146.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HFC67_RS08325 () | 1596170..1596793 | + | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| HFC67_RS26380 () | 1596793..1596972 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| HFC67_RS08330 () | 1596973..1598688 | - | 1716 | WP_077128820.1 | Fumarate reductase flavoprotein subunit | VF |
| HFC67_RS08335 () | 1599430..1599498 | + | 69 | Protein_1619 | serine/threonine-protein phosphatase | - |
| HFC67_RS08340 () | 1599512..1600209 | - | 698 | Protein_1620 | IS1 family transposase IS1X2 | Transposase |
| HFC67_RS08345 () | 1600242..1600862 | + | 621 | WP_167839500.1 | protein-serine/threonine phosphatase | - |
| HFC67_RS08350 () | 1600863..1601054 | - | 192 | WP_000457842.1 | YebW family protein | - |
| HFC67_RS08355 () | 1601159..1601395 | - | 237 | WP_032359717.1 | DUF1480 family protein | - |
| HFC67_RS08360 () | 1601513..1602952 | - | 1440 | WP_077897152.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HFC67_RS08365 () | 1603033..1605666 | - | 2634 | WP_001297532.1 | Siderophore exporter MmpL4 | VF |
| HFC67_RS08370 () | 1605635..1606918 | - | 1284 | WP_001301337.1 | membrane integrity lipid transport subunit YebS | - |
| HFC67_RS08375 () | 1607048..1607545 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| HFC67_RS08380 () | 1607642..1608340 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| HFC67_RS08385 () | 1608360..1610408 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| HFC67_RS08390 () | 1610600..1611481 | + | 882 | WP_000984517.1 | protease HtpX | - |
| HFC67_RS08395 () | 1611527..1612900 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| HFC67_RS08400 () | 1613077..1613868 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| HFC67_RS08405 () | 1614011..1614250 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| HFC67_RS08410 () | 1614409..1614552 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| HFC67_RS08415 () | 1614627..1614914 | + | 288 | WP_001006860.1 | YebO family protein | - |
| HFC67_RS08420 () | 1614804..1615085 | - | 282 | WP_167839313.1 | hypothetical protein | - |
| HFC67_RS08425 () | 1614984..1615681 | + | 698 | Protein_1637 | IS1 family transposase IS1X2 | Transposase |
| HFC67_RS08430 () | 1616359..1616502 | + | 144 | WP_001295496.1 | YobF family protein | - |
| HFC67_RS08435 () | 1616515..1616724 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HFC67_RS08440 () | 1616890..1617699 | + | 810 | WP_073840913.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HFC67_RS08445 () | 1617696..1618262 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| HFC67_RS08450 () | 1618691..1619149 | - | 459 | WP_032359624.1 | DUF986 family protein | - |
| HFC67_RS08455 () | 1619204..1620055 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| HFC67_RS08460 () | 1620068..1620868 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|