MGE detailed information
MGE type: Prophage MGE length: 80969 bp
Accession: NZ_CP050855 Location: 2343027..2423995 Organism: Serratia symbiotica strain CWBI-2.3 Replicon: chromosome
Accession: NZ_CP050855 Location: 2343027..2423995 Organism: Serratia symbiotica strain CWBI-2.3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYMBAF_RS11750 () | 2340217..2341041 | + | 825 | WP_040266749.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase | - |
| SYMBAF_RS11755 () | 2341162..2341551 | + | 390 | WP_040266751.1 | DUF3461 family protein | - |
| SYMBAF_RS11760 () | 2341634..2342083 | - | 450 | WP_040266753.1 | flavodoxin | - |
| SYMBAF_RS11765 () | 2342228..2342554 | - | 327 | WP_006708911.1 | YqcC family protein | - |
| SYMBAF_RS11770 () | 2343027..2344195 | + | 1169 | WP_152609001.1 | IS3 family transposase ISLad1 | Transposase |
| SYMBAF_RS11775 () | 2344374..2345738 | + | 1365 | WP_040266754.1 | LOG family protein | - |
| SYMBAF_RS11780 () | 2345885..2346643 | + | 759 | WP_040266755.1 | flap endonuclease Xni | - |
| SYMBAF_RS11785 () | 2346660..2347763 | - | 1104 | WP_040266757.1 | 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM | - |
| SYMBAF_RS11790 () | 2347756..2348151 | - | 396 | WP_173424357.1 | DUF423 domain-containing protein | - |
| SYMBAF_RS11795 () | 2348208..2349036 | - | 829 | Protein_2308 | transcriptional regulator GcvA | - |
| SYMBAF_RS11800 () | 2349670..2350875 | + | 1206 | WP_040266759.1 | cysteine desulfurase CsdA | - |
| SYMBAF_RS11805 () | 2350895..2351329 | + | 435 | WP_040266761.1 | cysteine desulfurase sulfur acceptor subunit CsdE | - |
| SYMBAF_RS11810 () | 2351320..2352126 | - | 807 | WP_040266762.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| SYMBAF_RS11815 () | 2352188..2353315 | - | 1128 | WP_052447851.1 | murein transglycosylase A | - |
| SYMBAF_RS11830 () | 2353834..2355084 | - | 1251 | WP_040266764.1 | N-acetylmuramoyl-L-alanine amidase AmiC | - |
| SYMBAF_RS11835 () | 2355322..2356647 | + | 1326 | WP_040266767.1 | amino-acid N-acetyltransferase | - |
| SYMBAF_RS11840 () | 2356671..2358512 | - | 1842 | WP_040266769.1 | exodeoxyribonuclease V subunit alpha | - |
| SYMBAF_RS11845 () | 2358512..2362060 | - | 3549 | WP_040266771.1 | exodeoxyribonuclease V subunit beta | - |
| SYMBAF_RS11850 () | 2362057..2364945 | - | 2889 | WP_040266773.1 | pitrilysin | - |
| SYMBAF_RS11855 () | 2365422..2368799 | - | 3378 | WP_040266774.1 | exodeoxyribonuclease V subunit gamma | - |
| SYMBAF_RS11860 () | 2368833..2369159 | - | 327 | WP_052447852.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| SYMBAF_RS11865 () | 2369176..2369622 | - | 447 | WP_040266776.1 | YgdB family protein | - |
| SYMBAF_RS11870 () | 2369619..2370197 | - | 579 | WP_040266782.1 | prepilin peptidase-dependent protein | - |
| SYMBAF_RS11875 () | 2370185..2370694 | - | 510 | WP_040267090.1 | prepilin peptidase-dependent protein | - |
| SYMBAF_RS11880 () | 2370868..2371662 | - | 795 | WP_040266784.1 | thymidylate synthase | - |
| SYMBAF_RS11885 () | 2371670..2372548 | - | 879 | WP_040266786.1 | prolipoprotein diacylglyceryl transferase | - |
| SYMBAF_RS11890 () | 2372914..2375160 | - | 2247 | WP_040266787.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| SYMBAF_RS11895 () | 2375173..2375694 | - | 522 | WP_040266789.1 | RNA pyrophosphohydrolase | - |
| SYMBAF_RS11900 () | 2376397..2377083 | + | 687 | WP_040266791.1 | DNA mismatch repair endonuclease MutH | - |
| SYMBAF_RS11905 () | 2377177..2377893 | + | 717 | WP_040266793.1 | TerC family protein | - |
| SYMBAF_RS11910 () | 2378046..2379086 | + | 1041 | WP_040266795.1 | NADP(H)-dependent aldo-keto reductase | - |
| SYMBAF_RS11915 () | 2379083..2379394 | - | 312 | WP_040266797.1 | hypothetical protein | - |
| SYMBAF_RS11920 () | 2379771..2381033 | - | 1263 | WP_040266800.1 | diaminopimelate decarboxylase | - |
| SYMBAF_RS11925 () | 2381163..2382086 | + | 924 | WP_040266802.1 | LysR family transcriptional regulator | - |
| SYMBAF_RS11930 () | 2382076..2382270 | - | 195 | WP_152609183.1 | hypothetical protein | - |
| SYMBAF_RS11935 () | 2382502..2383386 | + | 885 | WP_040266804.1 | MBL fold metallo-hydrolase | - |
| SYMBAF_RS11940 () | 2383547..2384257 | - | 711 | WP_162835912.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| SYMBAF_RS11945 () | 2384460..2385029 | + | 570 | WP_040266808.1 | HdeD family acid-resistance protein | - |
| SYMBAF_RS11950 () | 2385266..2385582 | - | 317 | Protein_2337 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SYMBAF_RS11955 () | 2385827..2386027 | - | 201 | WP_052447853.1 | hypothetical protein | - |
| SYMBAF_RS11960 () | 2386072..2386233 | - | 162 | WP_082027031.1 | hypothetical protein | - |
| SYMBAF_RS11965 () | 2386338..2386979 | - | 642 | Protein_2340 | IS1 family transposase | - |
| SYMBAF_RS11970 () | 2387556..2388530 | + | 975 | WP_040266810.1 | acyltransferase family protein | - |
| SYMBAF_RS11975 () | 2388667..2389722 | + | 1056 | WP_082027032.1 | acyltransferase | - |
| SYMBAF_RS11980 () | 2390438..2390977 | + | 540 | Protein_2343 | IS3 family transposase ISKpn37 | Transposase |
| SYMBAF_RS11985 () | 2391341..2391546 | + | 206 | Protein_2344 | transposase | - |
| SYMBAF_RS11990 () | 2391629..2392378 | + | 750 | WP_040266814.1 | hypothetical protein | VF |
| SYMBAF_RS11995 () | 2392456..2392956 | - | 501 | Protein_2346 | DUF4158 domain-containing protein | - |
| SYMBAF_RS12000 () | 2392986..2394147 | - | 1162 | Protein_2347 | IS256 family transposase | - |
| SYMBAF_RS12005 () | 2394218..2395822 | - | 1605 | Protein_2348 | ISL3 family transposase | - |
| SYMBAF_RS12010 () | 2396238..2396495 | + | 258 | WP_040266820.1 | type B 50S ribosomal protein L31 | - |
| SYMBAF_RS12015 () | 2396507..2396647 | + | 141 | WP_040266822.1 | type B 50S ribosomal protein L36 | - |
| SYMBAF_RS12020 () | 2396762..2397208 | + | 447 | Protein_2351 | IS110 family transposase ISSfl8 | Transposase |
| SYMBAF_RS12025 () | 2397819..2398697 | - | 879 | WP_040266823.1 | hypothetical protein | VF |
| SYMBAF_RS12030 () | 2398725..2399582 | - | 858 | WP_040266824.1 | hypothetical protein | VF |
| SYMBAF_RS12035 () | 2399579..2400292 | - | 714 | WP_040267096.1 | hypothetical protein | VF |
| SYMBAF_RS12040 () | 2400701..2401801 | + | 1101 | Protein_2355 | ISAs1 family transposase | - |
| SYMBAF_RS12045 () | 2402317..2402685 | + | 369 | WP_040266826.1 | Hha toxicity modulator TomB | Antitoxin Detail |
| SYMBAF_RS12050 () | 2402737..2402940 | + | 204 | WP_006709525.1 | hemolysin expression modulator Hha | Toxin Detail |
| SYMBAF_RS12060 () | 2403893..2404207 | + | 315 | WP_040266830.1 | MGMT family protein | - |
| SYMBAF_RS12065 () | 2404293..2405156 | + | 864 | WP_040266834.1 | acyl-CoA thioesterase II | - |
| SYMBAF_RS12070 () | 2405417..2406703 | - | 1287 | WP_040266836.1 | ammonium transporter AmtB | - |
| SYMBAF_RS12075 () | 2406738..2407076 | - | 339 | WP_040266837.1 | P-II family nitrogen regulator | - |
| SYMBAF_RS12080 () | 2407315..2409087 | - | 1773 | WP_040266838.1 | SmdB family multidrug efflux ABC transporter permease/ATP-binding protein | - |
| SYMBAF_RS12085 () | 2409080..2410855 | - | 1776 | WP_040266840.1 | hypothetical protein | VF |
| SYMBAF_RS12090 () | 2410948..2411409 | - | 462 | WP_040267098.1 | Lrp/AsnC family transcriptional regulator | - |
| SYMBAF_RS12095 () | 2411535..2412461 | + | 927 | WP_040266842.1 | DMT family transporter | - |
| SYMBAF_RS12100 () | 2412445..2412720 | - | 276 | WP_040266844.1 | hypothetical protein | - |
| SYMBAF_RS12105 () | 2413182..2413427 | + | 246 | Protein_2367 | 7-cyano-7-deazaguanine synthase | - |
| SYMBAF_RS12110 () | 2413971..2415233 | + | 1263 | WP_052447675.1 | group II intron reverse transcriptase/maturase | - |
| SYMBAF_RS12115 () | 2415318..2415743 | + | 426 | Protein_2369 | 7-cyano-7-deazaguanine synthase QueC | - |
| SYMBAF_RS12120 () | 2416352..2416720 | - | 369 | WP_040266846.1 | ComEA family DNA-binding protein | - |
| SYMBAF_RS12125 () | 2416859..2418745 | - | 1887 | WP_040266848.1 | hypothetical protein | VF |
| SYMBAF_RS12130 () | 2418925..2419197 | - | 273 | WP_040266850.1 | DNA-binding protein HU-beta | - |
| SYMBAF_RS12135 () | 2419390..2421768 | - | 2379 | WP_040266851.1 | endopeptidase La | - |
| SYMBAF_RS12140 () | 2421962..2423233 | - | 1272 | WP_040266853.1 | ATP-dependent protease ATP-binding subunit ClpX | - |
| SYMBAF_RS12145 () | 2423372..2423995 | - | 624 | WP_040266855.1 | hypothetical protein | VF |
| SYMBAF_RS12150 () | 2424411..2425715 | - | 1305 | WP_040266856.1 | trigger factor | - |
| SYMBAF_RS12155 () | 2426085..2426399 | - | 315 | WP_040266858.1 | transcriptional regulator BolA | - |
| SYMBAF_RS12160 () | 2426763..2427341 | + | 579 | WP_040267102.1 | hypothetical protein | - |
| SYMBAF_RS12165 () | 2427398..2428873 | + | 1476 | WP_040266860.1 | muropeptide MFS transporter AmpG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|