MGE detailed information
MGE type: Genomic_island MGE length: 17237 bp
Accession: NZ_CP050854 Location: 1146069..1163305 Organism: Brenneria izadpanahii strain Iran 50 Replicon: chromosome
Accession: NZ_CP050854 Location: 1146069..1163305 Organism: Brenneria izadpanahii strain Iran 50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HC231_RS05025 (HC231_05025) | 1141160..1141534 | + | 375 | WP_208230004.1 | sigma factor-binding protein Crl | - |
| HC231_RS05030 (HC231_05030) | 1141660..1142763 | + | 1104 | WP_208230005.1 | glutamate 5-kinase | - |
| HC231_RS05035 (HC231_05035) | 1142774..1144027 | + | 1254 | WP_208230006.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HC231_RS05045 (HC231_05045) | 1144488..1145393 | + | 906 | WP_208230007.1 | DUF6387 family protein | - |
| HC231_RS05050 (HC231_05050) | 1145516..1145722 | + | 207 | WP_208230008.1 | AlpA family transcriptional regulator | - |
| HC231_RS05055 (HC231_05055) | 1145755..1145985 | + | 231 | WP_208230009.1 | hypothetical protein | - |
| HC231_RS05060 (HC231_05060) | 1146069..1146341 | + | 273 | WP_208230010.1 | hypothetical protein | - |
| HC231_RS05065 (HC231_05065) | 1146638..1148800 | - | 2163 | WP_208230011.1 | AAA family ATPase | - |
| HC231_RS05070 (HC231_05070) | 1149325..1149699 | - | 375 | WP_208230012.1 | hypothetical protein | - |
| HC231_RS05075 (HC231_05075) | 1149689..1150198 | - | 510 | WP_208230013.1 | replication/maintenance protein RepL | - |
| HC231_RS05080 (HC231_05080) | 1151804..1152304 | + | 501 | WP_208230014.1 | replication protein | - |
| HC231_RS05085 (HC231_05085) | 1152308..1153470 | + | 1163 | WP_208228314.1 | IS3 family transposase ISEal1 | Transposase |
| HC231_RS05090 (HC231_05090) | 1153857..1154216 | - | 360 | WP_246494693.1 | ASCH domain-containing protein | - |
| HC231_RS05095 (HC231_05095) | 1154524..1154808 | + | 285 | WP_208230015.1 | hypothetical protein | - |
| HC231_RS05100 (HC231_05100) | 1154904..1155479 | + | 576 | WP_208230016.1 | hypothetical protein | - |
| HC231_RS05105 (HC231_05105) | 1155560..1155784 | + | 225 | WP_208230017.1 | hypothetical protein | - |
| HC231_RS05110 (HC231_05110) | 1155774..1156976 | - | 1203 | WP_208228152.1 | IS256 family transposase ISSod4 | Transposase |
| HC231_RS05115 (HC231_05115) | 1157136..1157315 | - | 180 | WP_208230018.1 | hypothetical protein | - |
| HC231_RS05120 (HC231_05120) | 1157736..1158683 | + | 948 | WP_208230019.1 | HNH endonuclease | - |
| HC231_RS23835 | 1158755..1159009 | - | 255 | Protein_1001 | integrase | - |
| HC231_RS05125 (HC231_05125) | 1159009..1159611 | + | 603 | WP_208231227.1 | ubiquinol-cytochrome C chaperone family protein | - |
| HC231_RS05130 (HC231_05130) | 1160018..1160311 | + | 294 | WP_027711146.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HC231_RS05135 (HC231_05135) | 1160308..1160712 | + | 405 | WP_281397389.1 | type II toxin-antitoxin system YafO family toxin | Toxin Detail |
| HC231_RS23840 | 1161123..1161305 | + | 183 | Protein_1005 | hypothetical protein | - |
| HC231_RS05145 (HC231_05145) | 1161340..1161972 | + | 633 | Protein_1006 | winged helix-turn-helix domain-containing protein | - |
| HC231_RS05150 (HC231_05150) | 1162049..1162411 | - | 363 | WP_208230021.1 | cupin domain-containing protein | - |
| HC231_RS05155 (HC231_05155) | 1162487..1163305 | - | 819 | WP_208230022.1 | AraC family transcriptional regulator | - |
| HC231_RS05160 (HC231_05160) | 1163872..1164444 | + | 573 | WP_208230023.1 | DUF1349 domain-containing protein | - |
| HC231_RS05165 (HC231_05165) | 1164512..1165186 | - | 675 | WP_208230024.1 | MarC family NAAT transporter | - |
| HC231_RS05170 (HC231_05170) | 1165278..1165772 | - | 495 | WP_208230025.1 | SRPBCC family protein | - |
| HC231_RS05175 (HC231_05175) | 1165986..1166480 | + | 495 | WP_208230026.1 | nicotinamide-nucleotide amidase | - |
| HC231_RS05180 (HC231_05180) | 1166586..1167656 | + | 1071 | WP_208230027.1 | recombinase RecA | - |
| HC231_RS05185 (HC231_05185) | 1167704..1168192 | + | 489 | WP_208230028.1 | recombination regulator RecX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|