MGE detailed information
MGE type: IS/Tn MGE length: 1419 bp
Accession: NZ_CP050502 Location: 49383..50801 Organism: Lacticaseibacillus paracasei strain NFFJ04 Replicon: plasmid pLPCN-2
Accession: NZ_CP050502 Location: 49383..50801 Organism: Lacticaseibacillus paracasei strain NFFJ04 Replicon: plasmid pLPCN-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HCJ88_RS15255 () | 47347..48048 | - | 702 | Protein_53 | IS1380 family transposase | - |
| HCJ88_RS15265 () | 48926..49369 | - | 444 | Protein_55 | transposase | - |
| HCJ88_RS15270 () | 49383..50801 | - | 1419 | WP_193137578.1 | IS5 family transposase ISLrh3 | Transposase |
| HCJ88_RS15275 () | 50937..51098 | - | 162 | Protein_57 | transposase | - |
| HCJ88_RS15280 () | 51176..51859 | + | 684 | WP_003586785.1 | IS6 family transposase | - |
| HCJ88_RS15285 () | 51991..52275 | - | 285 | WP_193137579.1 | BRCT domain-containing protein | - |
| HCJ88_RS15290 () | 52272..52931 | - | 660 | WP_193137580.1 | recombinase family protein | - |
| HCJ88_RS15295 () | 53069..53350 | - | 282 | WP_193137581.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| HCJ88_RS15300 () | 53343..53585 | - | 243 | WP_193137582.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HCJ88_RS15305 () | 53695..54484 | - | 790 | Protein_63 | IS5 family transposase | - |
| HCJ88_RS15310 () | 54483..54841 | + | 359 | Protein_64 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|