MGE detailed information
MGE type: Genomic_island MGE length: 11569 bp
Accession: NZ_CP050498 Location: 4108805..4120373 Organism: Escherichia coli strain RM13322 Replicon: chromosome
Accession: NZ_CP050498 Location: 4108805..4120373 Organism: Escherichia coli strain RM13322 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HCR07_RS20870 () | 4103806..4104240 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| HCR07_RS20875 () | 4104258..4105136 | - | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| HCR07_RS20880 () | 4105126..4105905 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| HCR07_RS20885 () | 4105916..4106389 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HCR07_RS20890 () | 4106412..4107692 | - | 1281 | WP_000681952.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HCR07_RS20895 () | 4107941..4108750 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HCR07_RS20900 () | 4108805..4109269 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HCR07_RS20905 () | 4109269..4109604 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HCR07_RS20910 () | 4109753..4111324 | - | 1572 | WP_001273736.1 | galactarate dehydratase | - |
| HCR07_RS20915 () | 4111699..4113033 | + | 1335 | WP_000599627.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HCR07_RS20920 () | 4113049..4113819 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HCR07_RS20925 () | 4113849..4114739 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HCR07_RS20930 () | 4114836..4115981 | + | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| HCR07_RS20940 () | 4116898..4118085 | - | 1188 | WP_000484573.1 | YhaC family protein | - |
| HCR07_RS20945 () | 4118107..4118646 | - | 540 | WP_000675746.1 | hypothetical protein | - |
| HCR07_RS20950 () | 4118902..4119246 | - | 345 | WP_000145836.1 | transcriptional activator TdcR | - |
| HCR07_RS20955 () | 4119435..4120373 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HCR07_RS20960 () | 4120472..4121461 | + | 990 | WP_000548342.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HCR07_RS20965 () | 4121483..4122814 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| HCR07_RS20970 () | 4122840..4124048 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|