MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 23067 bp
Accession: NZ_CP050498 Location: 1481796..1504862 Organism: Escherichia coli strain RM13322 Replicon: chromosome
Accession: NZ_CP050498 Location: 1481796..1504862 Organism: Escherichia coli strain RM13322 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HCR07_RS08230 () | 1477022..1477735 | - | 714 | WP_000261909.1 | helix-turn-helix domain-containing protein | - |
| HCR07_RS08235 () | 1477873..1478070 | - | 198 | WP_000917737.1 | hypothetical protein | - |
| HCR07_RS08240 () | 1478357..1479175 | - | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
| HCR07_RS08245 () | 1479327..1479698 | - | 372 | WP_000090265.1 | antitermination protein | - |
| HCR07_RS08250 () | 1479688..1480059 | - | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HCR07_RS08255 () | 1480072..1481121 | - | 1050 | WP_001265133.1 | DUF968 domain-containing protein | - |
| HCR07_RS08260 () | 1481123..1481401 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| HCR07_RS08265 () | 1481569..1481724 | - | 156 | WP_000813263.1 | type I toxin-antitoxin system toxin HokD | - |
| HCR07_RS08270 () | 1481796..1482869 | + | 1074 | WP_001178384.1 | IS481 family transposase ISKpn28 | Transposase |
| HCR07_RS08275 () | 1482927..1483064 | + | 138 | WP_000955173.1 | hypothetical protein | - |
| HCR07_RS08280 () | 1483430..1484203 | + | 774 | WP_000160654.1 | alpha/beta hydrolase | - |
| HCR07_RS08285 () | 1484555..1484968 | - | 414 | WP_001151233.1 | DUF977 family protein | - |
| HCR07_RS08290 () | 1484984..1485754 | - | 771 | WP_000450992.1 | DUF1627 domain-containing protein | - |
| HCR07_RS08295 () | 1485836..1486522 | - | 687 | WP_000788749.1 | ATP-binding protein | - |
| HCR07_RS08300 () | 1486529..1487644 | - | 1116 | WP_001205820.1 | hypothetical protein | - |
| HCR07_RS08305 () | 1487723..1488178 | + | 456 | WP_000273724.1 | hypothetical protein | - |
| HCR07_RS08310 () | 1488385..1488810 | - | 426 | WP_000693855.1 | Rha family transcriptional regulator | - |
| HCR07_RS08315 () | 1488794..1489066 | - | 273 | WP_000887453.1 | helix-turn-helix domain-containing protein | - |
| HCR07_RS08320 () | 1489175..1489576 | + | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| HCR07_RS08325 () | 1489604..1489795 | + | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| HCR07_RS08330 () | 1489795..1490082 | + | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HCR07_RS08335 () | 1490359..1490514 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| HCR07_RS08340 () | 1490656..1491045 | + | 390 | WP_000394513.1 | hypothetical protein | - |
| HCR07_RS08345 () | 1491232..1491417 | - | 186 | WP_001133046.1 | hypothetical protein | - |
| HCR07_RS08355 () | 1493258..1493446 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| HCR07_RS08360 () | 1493443..1493634 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| HCR07_RS08365 () | 1493728..1496199 | + | 2472 | WP_078322803.1 | exonuclease | - |
| HCR07_RS08370 () | 1496267..1496509 | + | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| HCR07_RS08375 () | 1496487..1497506 | + | 1020 | WP_001299351.1 | hypothetical protein ; Integrase | Integrase |
| HCR07_RS08380 () | 1497914..1498573 | + | 660 | WP_000375136.1 | FtsH protease modulator YccA | - |
| HCR07_RS08385 () | 1498664..1498993 | + | 330 | WP_000904444.1 | sulfurtransferase TusE | - |
| HCR07_RS08390 () | 1498990..1499268 | - | 279 | WP_000048255.1 | acylphosphatase | - |
| HCR07_RS08395 () | 1499363..1500554 | + | 1192 | Protein_1655 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| HCR07_RS08400 () | 1500612..1500929 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| HCR07_RS08405 () | 1500974..1501387 | - | 414 | WP_000665217.1 | CoA-binding protein | - |
| HCR07_RS08410 () | 1501560..1502222 | + | 663 | WP_000847791.1 | DUF2057 family protein | - |
| HCR07_RS08415 () | 1502318..1502776 | + | 459 | WP_000424181.1 | methylglyoxal synthase | - |
| HCR07_RS08420 () | 1502808..1504862 | - | 2055 | WP_000420533.1 | DNA helicase IV | - |
| HCR07_RS08425 () | 1504985..1505431 | + | 447 | WP_001261231.1 | YccF domain-containing protein | - |
| HCR07_RS08430 () | 1505441..1507603 | + | 2163 | WP_000875044.1 | TIGR01666 family membrane protein | - |
| HCR07_RS08435 () | 1507566..1508195 | - | 630 | WP_000839153.1 | CRP-S regulon transcriptional coactivator Sxy | - |
| HCR07_RS08440 () | 1508414..1508923 | + | 510 | WP_000288710.1 | cell division inhibitor SulA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|