MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 100391 bp
Accession: NZ_CP050332 Location: 5650141..5750531 Organism: Pseudomonas aeruginosa strain DVT413 Replicon: chromosome
Accession: NZ_CP050332 Location: 5650141..5750531 Organism: Pseudomonas aeruginosa strain DVT413 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HB730_RS26720 () | 5645657..5649910 | + | 4254 | WP_058176850.1 | two-partner secretion system exoprotein TpsA4 | - |
| HB730_RS26725 () | 5650278..5651138 | + | 861 | WP_003158180.1 | ParA family protein | - |
| HB730_RS26730 () | 5651140..5651865 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| HB730_RS26735 () | 5651862..5652359 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| HB730_RS26740 () | 5652365..5653111 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| HB730_RS26745 () | 5653108..5653794 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| HB730_RS26750 () | 5653794..5654495 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| HB730_RS26755 () | 5654492..5655199 | + | 708 | WP_003103848.1 | HNH endonuclease | - |
| HB730_RS26760 () | 5655183..5655401 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| HB730_RS26765 () | 5655398..5656741 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| HB730_RS26770 () | 5657180..5657626 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| HB730_RS26775 () | 5657804..5657989 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| HB730_RS26780 () | 5657979..5658506 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| HB730_RS26785 () | 5658503..5658760 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| HB730_RS26790 () | 5658753..5659250 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| HB730_RS26795 () | 5659243..5659476 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| HB730_RS26800 () | 5659476..5660492 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| HB730_RS26805 () | 5660495..5660743 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| HB730_RS26810 () | 5660740..5662473 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| HB730_RS26815 () | 5662501..5663256 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| HB730_RS26820 () | 5663259..5664584 | + | 1326 | WP_071534719.1 | hypothetical protein | - |
| HB730_RS26825 () | 5665554..5665751 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| HB730_RS26830 () | 5665907..5666635 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| HB730_RS26835 () | 5666641..5667189 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| HB730_RS26840 () | 5667236..5668075 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| HB730_RS26845 () | 5668105..5668593 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| HB730_RS26850 () | 5668701..5668946 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| HB730_RS26855 () | 5669012..5669230 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| HB730_RS26860 () | 5669430..5669690 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| HB730_RS26865 () | 5669712..5670122 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HB730_RS26870 () | 5670122..5670352 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| HB730_RS26875 () | 5670608..5672527 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| HB730_RS26880 () | 5672835..5673044 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| HB730_RS26885 () | 5673265..5675154 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| HB730_RS26890 () | 5675151..5677124 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| HB730_RS26895 () | 5677246..5678028 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| HB730_RS26900 () | 5678061..5679314 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| HB730_RS26905 () | 5679488..5680612 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| HB730_RS26910 () | 5680612..5682321 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| HB730_RS26915 () | 5682325..5683650 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| HB730_RS26920 () | 5683640..5684173 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| HB730_RS26925 () | 5684182..5685762 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| HB730_RS26930 () | 5685762..5686841 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| HB730_RS26935 () | 5686863..5687393 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| HB730_RS26940 () | 5687390..5688331 | + | 942 | WP_004352826.1 | Flp pilus assembly complex ATPase component TadA | - |
| HB730_RS26945 () | 5688336..5689664 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| HB730_RS26950 () | 5689693..5690130 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| HB730_RS26955 () | 5691196..5691441 | + | 246 | WP_003123340.1 | hypothetical protein | - |
| HB730_RS26960 () | 5691516..5691692 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| HB730_RS26965 () | 5692153..5692632 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| HB730_RS26970 () | 5692770..5692928 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| HB730_RS26975 () | 5693002..5693199 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| HB730_RS26980 () | 5693684..5694391 | + | 708 | WP_058176852.1 | hypothetical protein | - |
| HB730_RS26985 () | 5694627..5694977 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| HB730_RS26990 () | 5695034..5695825 | + | 792 | WP_003123344.1 | DUF3275 family protein | - |
| HB730_RS26995 () | 5695928..5696290 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| HB730_RS27000 () | 5696358..5696612 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| HB730_RS27005 () | 5696705..5697310 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| HB730_RS27010 () | 5697340..5698785 | + | 1446 | WP_174818311.1 | class I SAM-dependent methyltransferase | - |
| HB730_RS27015 () | 5698890..5701139 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| HB730_RS27020 () | 5701164..5701547 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| HB730_RS27025 () | 5701753..5702046 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| HB730_RS27030 () | 5702043..5702909 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| HB730_RS27035 () | 5703169..5703861 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| HB730_RS27040 () | 5703872..5704627 | + | 756 | WP_058176583.1 | TIGR03759 family integrating conjugative element protein | - |
| HB730_RS27045 () | 5704612..5705193 | + | 582 | WP_058176584.1 | hypothetical protein | VF |
| HB730_RS27050 () | 5705190..5705690 | + | 501 | WP_058176585.1 | integrating conjugative element protein | - |
| HB730_RS27055 () | 5705699..5705968 | + | 270 | WP_058176586.1 | hypothetical protein | - |
| HB730_RS27060 () | 5705972..5708203 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| HB730_RS27065 () | 5708203..5708949 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HB730_RS27070 () | 5708967..5709458 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| HB730_RS27075 () | 5709699..5711180 | + | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| HB730_RS27080 () | 5711312..5712421 | + | 1110 | WP_023083225.1 | hypothetical protein | - |
| HB730_RS27085 () | 5712466..5712777 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| HB730_RS27090 () | 5712950..5713249 | + | 300 | WP_023083774.1 | hypothetical protein | - |
| HB730_RS27095 () | 5713342..5713680 | + | 339 | WP_023083775.1 | RAQPRD family integrative conjugative element protein | - |
| HB730_RS27100 () | 5713677..5713916 | + | 240 | WP_003123360.1 | TIGR03758 family integrating conjugative element protein | - |
| HB730_RS27105 () | 5713934..5714290 | + | 357 | WP_023083777.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HB730_RS27110 () | 5714301..5714687 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| HB730_RS27115 () | 5714684..5715343 | + | 660 | WP_023083778.1 | TIGR03746 family integrating conjugative element protein | - |
| HB730_RS27120 () | 5715340..5716224 | + | 885 | WP_023083779.1 | TIGR03749 family integrating conjugative element protein | - |
| HB730_RS27125 () | 5716208..5717713 | + | 1506 | WP_023083780.1 | TIGR03752 family integrating conjugative element protein | - |
| HB730_RS27130 () | 5717691..5718134 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HB730_RS27135 () | 5718134..5721076 | + | 2943 | WP_061198382.1 | conjugative transfer ATPase | - |
| HB730_RS27140 () | 5721073..5721357 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| HB730_RS27145 () | 5721354..5722037 | + | 684 | WP_023129331.1 | DsbA family protein | - |
| HB730_RS27150 () | 5722141..5723001 | + | 861 | WP_071536658.1 | DNA adenine methylase | - |
| HB730_RS27155 () | 5723002..5724249 | - | 1248 | WP_023131540.1 | hypothetical protein | - |
| HB730_RS27160 () | 5724788..5725219 | + | 432 | WP_025982308.1 | TIGR03757 family integrating conjugative element protein | - |
| HB730_RS27165 () | 5725219..5726157 | + | 939 | WP_009875853.1 | TIGR03756 family integrating conjugative element protein | - |
| HB730_RS27170 () | 5726175..5727557 | + | 1383 | WP_023131541.1 | integrating conjugative element protein | - |
| HB730_RS27175 () | 5727557..5727904 | + | 348 | WP_009875851.1 | hypothetical protein | - |
| HB730_RS27180 () | 5727901..5729436 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HB730_RS27185 () | 5729466..5729819 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| HB730_RS27190 () | 5729938..5730210 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HB730_RS27195 () | 5730214..5730564 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HB730_RS27200 () | 5730942..5739455 | - | 8514 | WP_003125103.1 | hypothetical protein | VF |
| HB730_RS27205 () | 5740020..5740283 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| HB730_RS27210 () | 5740297..5740521 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| HB730_RS27215 () | 5740736..5741455 | + | 720 | WP_009875850.1 | Crp/Fnr family transcriptional regulator | - |
| HB730_RS27220 () | 5741526..5741888 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| HB730_RS27225 () | 5741992..5742486 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| HB730_RS27230 () | 5742595..5744613 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| HB730_RS27235 () | 5744769..5745962 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| HB730_RS27240 () | 5746350..5746706 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| HB730_RS27245 () | 5746767..5746919 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| HB730_RS27250 () | 5746918..5748837 | + | 1920 | WP_003158138.1 | helicase/relaxase domain-containing protein | - |
| HB730_RS27255 () | 5748834..5750117 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HB730_RS27275 () | 5750968..5753532 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| HB730_RS27280 () | 5753688..5754416 | - | 729 | WP_015503650.1 | peptidoglycan editing factor PgeF | - |
| HB730_RS27285 () | 5754413..5755375 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|