MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 112806 bp
Accession: NZ_CP050328 Location: 887124..999929 Organism: Pseudomonas aeruginosa strain DVT419 Replicon: chromosome
Accession: NZ_CP050328 Location: 887124..999929 Organism: Pseudomonas aeruginosa strain DVT419 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HB736_RS04170 () | 882279..883241 | + | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| HB736_RS04175 () | 883238..883966 | + | 729 | WP_003161770.1 | peptidoglycan editing factor PgeF | - |
| HB736_RS04180 () | 884122..886686 | + | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| HB736_RS04200 () | 887537..888820 | - | 1284 | WP_023103451.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HB736_RS04205 () | 888817..890736 | - | 1920 | WP_043108110.1 | helicase/relaxase domain-containing protein | - |
| HB736_RS04210 () | 890949..891305 | - | 357 | WP_071536022.1 | hypothetical protein | - |
| HB736_RS04215 () | 891690..892883 | + | 1194 | WP_023103449.1 | fatty acid desaturase | - |
| HB736_RS04220 () | 893039..895057 | - | 2019 | WP_023103448.1 | class I SAM-dependent methyltransferase | - |
| HB736_RS04225 () | 895166..895660 | - | 495 | WP_016264190.1 | hypothetical protein | - |
| HB736_RS04230 () | 895764..896126 | - | 363 | WP_016264191.1 | hypothetical protein | - |
| HB736_RS04235 () | 896200..896919 | - | 720 | WP_009875850.1 | Crp/Fnr family transcriptional regulator | - |
| HB736_RS04240 () | 897134..897358 | - | 225 | WP_023103447.1 | DUF1652 domain-containing protein | - |
| HB736_RS04245 () | 897372..897635 | - | 264 | WP_016264192.1 | hypothetical protein | - |
| HB736_RS04250 () | 898200..906713 | + | 8514 | WP_023103446.1 | hypothetical protein | VF |
| HB736_RS04255 () | 906925..907275 | - | 351 | WP_016264194.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HB736_RS04260 () | 907279..907551 | - | 273 | WP_023103444.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HB736_RS04265 () | 908040..909551 | - | 1512 | WP_023103443.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HB736_RS04270 () | 909548..909895 | - | 348 | WP_016264196.1 | hypothetical protein | - |
| HB736_RS04275 () | 909895..911277 | - | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| HB736_RS04280 () | 911295..912233 | - | 939 | WP_023103442.1 | TIGR03756 family integrating conjugative element protein | - |
| HB736_RS04285 () | 912233..912664 | - | 432 | WP_079279831.1 | TIGR03757 family integrating conjugative element protein | - |
| HB736_RS04290 () | 913060..913494 | - | 435 | WP_023103441.1 | DUF1090 domain-containing protein | - |
| HB736_RS04295 () | 913958..914548 | + | 591 | WP_023103440.1 | hypothetical protein | VF |
| HB736_RS04300 () | 914624..915343 | + | 720 | WP_023103439.1 | hypothetical protein | VF |
| HB736_RS04305 () | 915436..917955 | + | 2520 | WP_079279845.1 | hypothetical protein | VF |
| HB736_RS04310 () | 917957..918958 | + | 1002 | WP_023103437.1 | fimbrial protein | - |
| HB736_RS04315 () | 919323..919766 | - | 444 | WP_158509325.1 | IS3 family transposase | - |
| HB736_RS04320 () | 920019..921181 | + | 1163 | WP_112207449.1 | IS3 family transposase IS222 | Transposase |
| HB736_RS04325 () | 921156..921416 | - | 261 | WP_070698115.1 | transposase | - |
| HB736_RS04330 () | 921503..922120 | - | 618 | WP_023103434.1 | Transcriptional regulatory protein RcsB | VF |
| HB736_RS04335 () | 922740..922839 | - | 100 | Protein_853 | N-acetyltransferase | - |
| HB736_RS04340 () | 922873..923268 | - | 396 | Protein_854 | thioredoxin domain-containing protein | - |
| HB736_RS04345 () | 923265..923549 | - | 285 | WP_003086159.1 | hypothetical protein | - |
| HB736_RS04350 () | 923546..926488 | - | 2943 | WP_023103432.1 | conjugative transfer ATPase | - |
| HB736_RS04355 () | 926488..926931 | - | 444 | WP_017001414.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HB736_RS04360 () | 926909..928414 | - | 1506 | WP_023103431.1 | TIGR03752 family integrating conjugative element protein | - |
| HB736_RS04365 () | 928398..929279 | - | 882 | WP_023103430.1 | TIGR03749 family integrating conjugative element protein | - |
| HB736_RS04370 () | 929276..929935 | - | 660 | WP_003086164.1 | TIGR03746 family integrating conjugative element protein | - |
| HB736_RS04375 () | 929932..930318 | - | 387 | WP_003134190.1 | TIGR03750 family conjugal transfer protein | - |
| HB736_RS04380 () | 930329..930685 | - | 357 | WP_023103429.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HB736_RS04385 () | 930703..930942 | - | 240 | WP_031634739.1 | TIGR03758 family integrating conjugative element protein | - |
| HB736_RS04390 () | 930939..931277 | - | 339 | WP_031634736.1 | RAQPRD family integrative conjugative element protein | - |
| HB736_RS04395 () | 931452..931697 | - | 246 | Protein_865 | hypothetical protein | VF |
| HB736_RS04400 () | 932289..932936 | - | 648 | WP_023103426.1 | Transcriptional regulatory protein RcsB | VF |
| HB736_RS04405 () | 933007..936249 | - | 3243 | WP_174706269.1 | Sensor histidine kinase RcsC | VF |
| HB736_RS04410 () | 936335..937528 | - | 1194 | WP_023103424.1 | EAL domain-containing response regulator | - |
| HB736_RS04415 () | 937515..940334 | - | 2820 | WP_023103423.1 | Sensor histidine kinase RcsC | VF |
| HB736_RS04420 () | 940583..940762 | - | 180 | Protein_870 | transposase | - |
| HB736_RS04425 () | 940937..941383 | - | 447 | Protein_871 | hypothetical protein | VF |
| HB736_RS04430 () | 941399..942145 | - | 747 | WP_023103421.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HB736_RS04435 () | 942145..944376 | - | 2232 | WP_023103420.1 | type IV conjugative transfer system coupling protein TraD | - |
| HB736_RS04440 () | 944380..944649 | - | 270 | WP_174706270.1 | hypothetical protein | - |
| HB736_RS04445 () | 944658..945158 | - | 501 | WP_023103419.1 | integrating conjugative element protein | - |
| HB736_RS04450 () | 945155..945736 | - | 582 | WP_015648301.1 | hypothetical protein | VF |
| HB736_RS04455 () | 945721..946476 | - | 756 | WP_023103418.1 | TIGR03759 family integrating conjugative element protein | - |
| HB736_RS04460 () | 946487..947176 | - | 690 | WP_023103417.1 | hypothetical protein | - |
| HB736_RS04465 () | 947415..949649 | + | 2235 | WP_023103416.1 | CRISPR-associated helicase/endonuclease Cas3 | - |
| HB736_RS04470 () | 949700..950374 | + | 675 | WP_023103415.1 | type I-C CRISPR-associated protein Cas5 | - |
| HB736_RS04475 () | 950371..952134 | + | 1764 | WP_023103414.1 | type I-C CRISPR-associated protein Cas8c/Csd1 | - |
| HB736_RS04480 () | 952146..953015 | + | 870 | WP_023103413.1 | type I-C CRISPR-associated protein Cas7/Csd2 | - |
| HB736_RS04485 () | 953034..953666 | + | 633 | WP_023103412.1 | CRISPR-associated protein Cas4 | - |
| HB736_RS04490 () | 953670..954709 | + | 1040 | Protein_884 | type I-C CRISPR-associated endonuclease Cas1 | - |
| HB736_RS04495 () | 954719..955009 | + | 291 | WP_023103410.1 | CRISPR-associated endonuclease Cas2 | - |
| HB736_RS04500 () | 956136..956282 | - | 147 | WP_023103409.1 | hypothetical protein | - |
| HB736_RS04505 () | 956374..956628 | - | 255 | WP_023103408.1 | hypothetical protein | - |
| HB736_RS04510 () | 956696..957058 | - | 363 | WP_023103407.1 | hypothetical protein | - |
| HB736_RS04515 () | 957128..957409 | - | 282 | WP_017002267.1 | hypothetical protein | - |
| HB736_RS04520 () | 957406..958038 | - | 633 | Protein_890 | DUF3275 family protein | - |
| HB736_RS04525 () | 958095..958445 | - | 351 | WP_023103405.1 | hypothetical protein | - |
| HB736_RS04530 () | 958681..959388 | - | 708 | WP_033951905.1 | hypothetical protein | - |
| HB736_RS04535 () | 959873..960070 | - | 198 | WP_023103403.1 | hypothetical protein | - |
| HB736_RS04540 () | 960144..960302 | - | 159 | WP_003134147.1 | hypothetical protein | - |
| HB736_RS04545 () | 960440..960928 | - | 489 | WP_004347954.1 | DUF3577 domain-containing protein | - |
| HB736_RS04550 () | 961640..962029 | - | 390 | WP_023103402.1 | hypothetical protein | - |
| HB736_RS04555 () | 962944..963381 | - | 438 | WP_023103401.1 | hypothetical protein | VF |
| HB736_RS04560 () | 963410..964738 | - | 1329 | WP_023103400.1 | hypothetical protein | VF |
| HB736_RS04565 () | 964743..965684 | - | 942 | WP_003134125.1 | Flp pilus assembly complex ATPase component TadA | - |
| HB736_RS04570 () | 965681..966211 | - | 531 | WP_003099765.1 | hypothetical protein | VF |
| HB736_RS04575 () | 966233..967312 | - | 1080 | WP_023103399.1 | hypothetical protein | VF |
| HB736_RS04580 () | 967312..968892 | - | 1581 | WP_023103398.1 | hypothetical protein | VF |
| HB736_RS04585 () | 968901..969434 | - | 534 | WP_023103397.1 | type IV pilus biogenesis protein PilP | - |
| HB736_RS04590 () | 969424..970749 | - | 1326 | WP_023103396.1 | type 4b pilus protein PilO2 | - |
| HB736_RS04595 () | 970753..972462 | - | 1710 | WP_016264244.1 | hypothetical protein | VF |
| HB736_RS04600 () | 972462..973586 | - | 1125 | WP_023103395.1 | hypothetical protein | VF |
| HB736_RS04605 () | 973673..975646 | - | 1974 | WP_023103394.1 | DEAD/DEAH box helicase | - |
| HB736_RS04610 () | 975643..977532 | - | 1890 | WP_023103393.1 | hypothetical protein | - |
| HB736_RS04615 () | 978213..978965 | - | 753 | WP_023103392.1 | hypothetical protein | - |
| HB736_RS04620 () | 978973..980892 | - | 1920 | WP_023103391.1 | type I DNA topoisomerase | - |
| HB736_RS04625 () | 981168..981398 | + | 231 | WP_031634724.1 | antitoxin | Antitoxin Detail |
| HB736_RS04630 () | 981398..981808 | + | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HB736_RS04635 () | 981824..982018 | + | 195 | WP_023103390.1 | hypothetical protein | - |
| HB736_RS04640 () | 982320..982496 | - | 177 | WP_126546597.1 | CrpP family protein | - |
| HB736_RS04645 () | 982708..983196 | - | 489 | WP_023103388.1 | single-stranded DNA-binding protein | - |
| HB736_RS04650 () | 983210..983743 | - | 534 | WP_023103387.1 | DUF3158 family protein | - |
| HB736_RS04655 () | 983749..984477 | - | 729 | WP_023103386.1 | TIGR03761 family integrating conjugative element protein | - |
| HB736_RS04660 () | 984470..984889 | - | 420 | WP_140419861.1 | hypothetical protein | - |
| HB736_RS04665 () | 984918..985157 | - | 240 | WP_003149503.1 | hypothetical protein | - |
| HB736_RS04670 () | 985148..985393 | - | 246 | WP_023103385.1 | hypothetical protein | - |
| HB736_RS04675 () | 985390..986715 | - | 1326 | WP_023103384.1 | hypothetical protein | - |
| HB736_RS04680 () | 986712..987479 | - | 768 | WP_023098069.1 | DUF2857 domain-containing protein | - |
| HB736_RS04685 () | 987507..989246 | - | 1740 | WP_031634718.1 | ParB family protein | - |
| HB736_RS04690 () | 989243..989491 | - | 249 | WP_016254076.1 | Arc family DNA-binding protein | - |
| HB736_RS04695 () | 989494..990510 | - | 1017 | WP_023103382.1 | nucleoid-associated protein YejK | - |
| HB736_RS04700 () | 990510..990743 | - | 234 | WP_003103841.1 | hypothetical protein | - |
| HB736_RS04705 () | 990736..991230 | - | 495 | WP_126546598.1 | hypothetical protein | - |
| HB736_RS04710 () | 991223..991480 | - | 258 | WP_023103380.1 | hypothetical protein | - |
| HB736_RS04715 () | 991477..992004 | - | 528 | WP_023103379.1 | hypothetical protein | - |
| HB736_RS04720 () | 992357..992803 | + | 447 | WP_003117028.1 | hypothetical protein | - |
| HB736_RS04725 () | 993242..994585 | - | 1344 | WP_023103377.1 | replicative DNA helicase | - |
| HB736_RS04730 () | 994582..994806 | - | 225 | WP_003134074.1 | hypothetical protein | - |
| HB736_RS04735 () | 994790..995497 | - | 708 | WP_016264259.1 | HNH endonuclease | - |
| HB736_RS04740 () | 995494..996195 | - | 702 | WP_009315890.1 | DUF2786 domain-containing protein | - |
| HB736_RS04745 () | 996195..996881 | - | 687 | WP_003141374.1 | hypothetical protein | - |
| HB736_RS04750 () | 996878..997699 | - | 822 | WP_162839728.1 | hypothetical protein | - |
| HB736_RS04755 () | 997705..998202 | - | 498 | WP_023103375.1 | hypothetical protein | - |
| HB736_RS04760 () | 998199..998930 | - | 732 | WP_023103374.1 | hypothetical protein | - |
| HB736_RS04765 () | 998932..999792 | - | 861 | WP_023094840.1 | ParA family protein | - |
| HB736_RS04770 () | 1000158..1004411 | - | 4254 | WP_033942398.1 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|