MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 99989 bp
Accession: NZ_CP050324 Location: 4541378..4641366 Organism: Pseudomonas aeruginosa strain DVT427 Replicon: chromosome
Accession: NZ_CP050324 Location: 4541378..4641366 Organism: Pseudomonas aeruginosa strain DVT427 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HB742_RS20900 () | 4536866..4537477 | - | 612 | WP_004348355.1 | type 1 fimbrial protein | - |
| HB742_RS20905 () | 4537921..4538298 | - | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| HB742_RS20910 () | 4538883..4539521 | + | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| HB742_RS20915 () | 4539906..4540466 | + | 561 | WP_033877169.1 | hypothetical protein | - |
| HB742_RS20920 () | 4540587..4540991 | - | 405 | WP_014603194.1 | acyl-CoA thioesterase | - |
| HB742_RS20925 () | 4541515..4542375 | + | 861 | WP_003158180.1 | ParA family protein | - |
| HB742_RS20930 () | 4542377..4543102 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| HB742_RS20935 () | 4543099..4543596 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| HB742_RS20940 () | 4543602..4544348 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| HB742_RS20945 () | 4544345..4545031 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| HB742_RS20950 () | 4545031..4545732 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| HB742_RS20955 () | 4545729..4546436 | + | 708 | WP_003103848.1 | HNH endonuclease | - |
| HB742_RS20960 () | 4546420..4546638 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| HB742_RS20965 () | 4546635..4547978 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| HB742_RS20970 () | 4548417..4548863 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| HB742_RS20975 () | 4549041..4549226 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| HB742_RS20980 () | 4549216..4549743 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| HB742_RS20985 () | 4549740..4549997 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| HB742_RS20990 () | 4549990..4550487 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| HB742_RS20995 () | 4550480..4550713 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| HB742_RS21000 () | 4550713..4551729 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| HB742_RS21005 () | 4551732..4551980 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| HB742_RS21010 () | 4551977..4553710 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| HB742_RS21015 () | 4553738..4554493 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| HB742_RS21020 () | 4554496..4555821 | + | 1326 | WP_071534719.1 | hypothetical protein | - |
| HB742_RS21025 () | 4556791..4556988 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| HB742_RS21030 () | 4557144..4557872 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| HB742_RS21035 () | 4557878..4558426 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| HB742_RS21040 () | 4558473..4559312 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| HB742_RS21045 () | 4559342..4559830 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| HB742_RS21050 () | 4559938..4560183 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| HB742_RS21055 () | 4560249..4560467 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| HB742_RS21060 () | 4560667..4560927 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| HB742_RS21065 () | 4560949..4561359 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HB742_RS21070 () | 4561359..4561589 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| HB742_RS21075 () | 4561845..4563764 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| HB742_RS21080 () | 4564072..4564281 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| HB742_RS21085 () | 4564502..4566391 | + | 1890 | WP_003109354.1 | hypothetical protein | - |
| HB742_RS21090 () | 4566388..4568391 | + | 2004 | WP_003109355.1 | DEAD/DEAH box helicase | - |
| HB742_RS21095 () | 4569015..4570139 | + | 1125 | WP_003109356.1 | hypothetical protein | VF |
| HB742_RS21100 () | 4570139..4571848 | + | 1710 | WP_020751093.1 | Outer membrane lipoprotein BfpB | VF |
| HB742_RS21105 () | 4571852..4573177 | + | 1326 | WP_003109358.1 | type 4b pilus protein PilO2 | - |
| HB742_RS21110 () | 4573167..4573700 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| HB742_RS21115 () | 4573709..4575289 | + | 1581 | WP_015060168.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HB742_RS21120 () | 4575289..4576368 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HB742_RS21125 () | 4576390..4576920 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| HB742_RS21130 () | 4576917..4577858 | + | 942 | WP_003109361.1 | Flp pilus assembly complex ATPase component TadA | - |
| HB742_RS21135 () | 4577863..4579191 | + | 1329 | WP_003109362.1 | hypothetical protein | VF |
| HB742_RS21140 () | 4579220..4579657 | + | 438 | WP_003109363.1 | hypothetical protein | VF |
| HB742_RS21145 () | 4580579..4580968 | + | 390 | WP_003109365.1 | hypothetical protein | - |
| HB742_RS21150 () | 4581680..4582159 | + | 480 | WP_003109367.1 | DUF3577 domain-containing protein | - |
| HB742_RS21155 () | 4582297..4582455 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| HB742_RS21160 () | 4582529..4582726 | + | 198 | WP_003109369.1 | hypothetical protein | - |
| HB742_RS21165 () | 4583212..4583919 | + | 708 | WP_003456317.1 | hypothetical protein | - |
| HB742_RS21170 () | 4584155..4584505 | + | 351 | WP_003109371.1 | hypothetical protein | - |
| HB742_RS21175 () | 4584562..4585353 | + | 792 | WP_003109372.1 | DUF3275 family protein | - |
| HB742_RS21180 () | 4585456..4585818 | + | 363 | WP_003109373.1 | hypothetical protein | - |
| HB742_RS21185 () | 4585886..4586140 | + | 255 | WP_003109374.1 | hypothetical protein | - |
| HB742_RS21190 () | 4586232..4586837 | + | 606 | WP_003109375.1 | hypothetical protein | - |
| HB742_RS21195 () | 4586867..4588318 | + | 1452 | WP_003109376.1 | class I SAM-dependent methyltransferase | - |
| HB742_RS21200 () | 4588423..4590672 | + | 2250 | WP_003109377.1 | DEAD/DEAH box helicase | - |
| HB742_RS21205 () | 4590774..4591193 | - | 420 | WP_171942288.1 | hypothetical protein | - |
| HB742_RS21210 () | 4591354..4591482 | - | 129 | Protein_4200 | DUF4113 domain-containing protein | - |
| HB742_RS21215 () | 4591476..4591874 | + | 399 | Protein_4201 | DDE-type integrase/transposase/recombinase | - |
| HB742_RS21220 () | 4591997..4592221 | + | 225 | WP_031637471.1 | hypothetical protein | - |
| HB742_RS21225 () | 4593385..4594074 | + | 690 | WP_020751095.1 | hypothetical protein | - |
| HB742_RS21230 () | 4594085..4594840 | + | 756 | WP_003109383.1 | TIGR03759 family integrating conjugative element protein | - |
| HB742_RS21235 () | 4594825..4595406 | + | 582 | WP_020751096.1 | hypothetical protein | - |
| HB742_RS21240 () | 4595403..4595903 | + | 501 | WP_003109385.1 | integrating conjugative element protein | - |
| HB742_RS21245 () | 4595912..4596181 | + | 270 | WP_003109386.1 | hypothetical protein | - |
| HB742_RS21250 () | 4596185..4598416 | + | 2232 | WP_003109387.1 | type IV conjugative transfer system coupling protein TraD | - |
| HB742_RS21255 () | 4598416..4599162 | + | 747 | WP_003109388.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HB742_RS21260 () | 4599180..4599671 | + | 492 | WP_003109389.1 | hypothetical protein | - |
| HB742_RS21265 () | 4599911..4601392 | + | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| HB742_RS21270 () | 4601524..4602633 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| HB742_RS21275 () | 4602678..4602989 | - | 312 | WP_003109392.1 | DUF2845 domain-containing protein | - |
| HB742_RS21280 () | 4603162..4603461 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| HB742_RS21285 () | 4603555..4603893 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| HB742_RS21290 () | 4603890..4604129 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| HB742_RS21295 () | 4604147..4604503 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HB742_RS21300 () | 4604514..4604900 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| HB742_RS21305 () | 4604897..4605556 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| HB742_RS21310 () | 4605553..4606437 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| HB742_RS21315 () | 4606421..4607926 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| HB742_RS21320 () | 4607904..4608347 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HB742_RS21325 () | 4608347..4611289 | + | 2943 | WP_015060177.1 | conjugative transfer ATPase | - |
| HB742_RS21330 () | 4611286..4611570 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| HB742_RS21335 () | 4611567..4612223 | + | 657 | WP_003158151.1 | DsbA family protein | - |
| HB742_RS21340 () | 4612220..4612438 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| HB742_RS21345 () | 4612997..4614184 | + | 1188 | WP_003159689.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HB742_RS21350 () | 4614207..4614629 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| HB742_RS21355 () | 4614619..4615485 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| HB742_RS21360 () | 4615623..4616054 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| HB742_RS21365 () | 4616054..4616992 | + | 939 | WP_003159688.1 | TIGR03756 family integrating conjugative element protein | - |
| HB742_RS21370 () | 4617010..4618392 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| HB742_RS21375 () | 4618392..4618739 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| HB742_RS21380 () | 4618736..4620271 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HB742_RS21385 () | 4620301..4620654 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| HB742_RS21390 () | 4620773..4621045 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HB742_RS21395 () | 4621049..4621399 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HB742_RS21400 () | 4621777..4630290 | - | 8514 | WP_003125103.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| HB742_RS21405 () | 4630855..4631118 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| HB742_RS21410 () | 4631132..4631356 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| HB742_RS21415 () | 4631571..4632290 | + | 720 | WP_009875850.1 | Crp/Fnr family transcriptional regulator | - |
| HB742_RS21420 () | 4632361..4632723 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| HB742_RS21425 () | 4632827..4633321 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| HB742_RS21430 () | 4633430..4635448 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| HB742_RS21435 () | 4635604..4636797 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| HB742_RS21440 () | 4637185..4637541 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| HB742_RS21445 () | 4637602..4637754 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| HB742_RS21450 () | 4637753..4639672 | + | 1920 | WP_003158138.1 | helicase/relaxase domain-containing protein | - |
| HB742_RS21455 () | 4639669..4640952 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HB742_RS21465 () | 4641457..4642131 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| HB742_RS21470 () | 4642147..4642794 | - | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| HB742_RS21475 () | 4643014..4643838 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| HB742_RS21480 () | 4643848..4644354 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| HB742_RS21485 () | 4644407..4645705 | - | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|