MGE detailed information
MGE type: Mobilizable plasmid MGE length: 94384 bp
Accession: NZ_CP050261 Location: 1..94384 Organism: Pseudomonas coronafaciens strain X-1 Replicon: plasmid unnamed1
Accession: NZ_CP050261 Location: 1..94384 Organism: Pseudomonas coronafaciens strain X-1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBB04_RS25865 () | 2953..3601 | + | 649 | Protein_1 | AAA family ATPase | - |
| HBB04_RS25870 () | 4502..5813 | + | 1312 | Protein_2 | replication initiation protein | - |
| HBB04_RS25875 () | 5951..6376 | + | 426 | WP_010209623.1 | S24 family peptidase | - |
| HBB04_RS25880 () | 6354..7653 | + | 1300 | Protein_4 | Y-family DNA polymerase | - |
| HBB04_RS25885 () | 7819..8142 | + | 324 | WP_054070434.1 | hypothetical protein | - |
| HBB04_RS25890 () | 8490..8708 | + | 219 | WP_191867952.1 | hypothetical protein | - |
| HBB04_RS25895 () | 9385..9891 | - | 507 | WP_191867953.1 | AAA family ATPase | - |
| HBB04_RS25900 () | 10202..11047 | - | 846 | WP_122354594.1 | hypothetical protein | - |
| HBB04_RS25905 () | 11236..11481 | - | 246 | WP_147458901.1 | hypothetical protein | - |
| HBB04_RS25910 () | 11515..11985 | - | 471 | WP_122354590.1 | putative addiction module antidote protein | - |
| HBB04_RS25915 () | 11982..12302 | - | 321 | WP_122354588.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HBB04_RS25920 () | 12633..14006 | - | 1374 | WP_183136694.1 | type III effector | - |
| HBB04_RS25925 () | 14311..14460 | + | 150 | Protein_13 | IS91 family transposase | - |
| HBB04_RS25930 () | 15110..15520 | + | 411 | WP_122354582.1 | hypothetical protein | - |
| HBB04_RS25935 () | 15858..16058 | + | 201 | WP_074809324.1 | hypothetical protein | - |
| HBB04_RS25940 () | 16171..16821 | + | 651 | WP_044423455.1 | AAA family ATPase | - |
| HBB04_RS25945 () | 16811..17098 | + | 288 | WP_024639839.1 | hypothetical protein | - |
| HBB04_RS25950 () | 17336..17969 | + | 634 | Protein_18 | SOS response-associated peptidase | - |
| HBB04_RS25955 () | 18222..18467 | + | 246 | WP_122354580.1 | adhesion biosynthesis transcriptional regulator | - |
| HBB04_RS25960 () | 18518..18919 | + | 402 | WP_147458900.1 | hypothetical protein | - |
| HBB04_RS25965 () | 19017..19265 | + | 249 | WP_122354576.1 | hypothetical protein | - |
| HBB04_RS25970 () | 19443..19724 | - | 282 | WP_191867954.1 | MerR family DNA-binding protein | - |
| HBB04_RS25975 () | 20244..21611 | + | 1368 | WP_016981059.1 | hypothetical protein | - |
| HBB04_RS25980 () | 21623..22231 | + | 609 | WP_054997438.1 | DUF1851 domain-containing protein | - |
| HBB04_RS25985 () | 22263..22472 | - | 210 | Protein_25 | transposase domain-containing protein | - |
| HBB04_RS25990 () | 22469..22771 | + | 303 | Protein_26 | transposase | - |
| HBB04_RS25995 () | 23074..24054 | + | 981 | Protein_27 | Y-family DNA polymerase | - |
| HBB04_RS26000 () | 24222..24413 | - | 192 | WP_122324992.1 | hypothetical protein | - |
| HBB04_RS26005 () | 24403..24954 | - | 552 | WP_122357059.1 | hypothetical protein | - |
| HBB04_RS26010 () | 25209..25865 | + | 657 | WP_017684244.1 | hypothetical protein | - |
| HBB04_RS26015 () | 25913..26167 | + | 255 | WP_122324994.1 | hypothetical protein | - |
| HBB04_RS26020 () | 26730..27071 | + | 342 | Protein_32 | hypothetical protein | - |
| HBB04_RS26025 () | 27086..27328 | + | 243 | WP_122357061.1 | hypothetical protein | - |
| HBB04_RS26030 () | 27343..27594 | + | 252 | WP_024690828.1 | antirestriction protein ArdR | - |
| HBB04_RS26035 () | 28125..28391 | + | 267 | Protein_35 | helix-turn-helix transcriptional regulator | - |
| HBB04_RS26040 () | 28413..28598 | - | 186 | WP_031598237.1 | hypothetical protein | - |
| HBB04_RS26045 () | 28639..29985 | - | 1347 | WP_122355389.1 | MHS family MFS transporter | - |
| HBB04_RS26050 () | 30026..31219 | - | 1194 | WP_058886927.1 | L-2-hydroxyglutarate oxidase | - |
| HBB04_RS26055 () | 31287..31988 | - | 702 | WP_031598948.1 | FadR family transcriptional regulator | - |
| HBB04_RS26060 () | 32607..34556 | + | 1950 | WP_055004681.1 | EAL domain-containing protein | - |
| HBB04_RS26065 () | 35050..35235 | + | 186 | WP_081002928.1 | Com family DNA-binding transcriptional regulator | - |
| HBB04_RS26070 () | 35247..36542 | + | 1296 | WP_117140640.1 | glycoside hydrolase family 68 protein | - |
| HBB04_RS26075 () | 36622..37803 | + | 1182 | WP_117147873.1 | glycoside hydrolase family 10 protein | - |
| HBB04_RS26080 () | 38604..39227 | + | 624 | WP_055004217.1 | glycoside hydrolase family 25 protein | - |
| HBB04_RS26085 () | 40399..41931 | + | 1533 | WP_055004218.1 | hypothetical protein | - |
| HBB04_RS26090 () | 42533..43015 | - | 483 | WP_122356428.1 | hypothetical protein | - |
| HBB04_RS26095 () | 43283..43543 | - | 261 | WP_050586573.1 | hypothetical protein | - |
| HBB04_RS26100 () | 43929..44062 | + | 134 | Protein_48 | IS5/IS1182 family transposase | - |
| HBB04_RS26105 () | 44066..44587 | + | 522 | Protein_49 | AAA family ATPase | - |
| HBB04_RS26110 () | 44580..45002 | + | 423 | WP_122326270.1 | recombinase family protein | - |
| HBB04_RS26115 () | 45178..47448 | + | 2271 | WP_055004219.1 | hypothetical protein | - |
| HBB04_RS26120 () | 48180..48836 | + | 657 | WP_157973363.1 | DUF2971 domain-containing protein | - |
| HBB04_RS26125 () | 48931..49536 | - | 606 | WP_080268302.1 | histidine phosphatase family protein | - |
| HBB04_RS26130 () | 49776..50711 | - | 936 | WP_191867947.1 | syringolide biosynthetic protein AvrD1 | - |
| HBB04_RS26135 () | 50996..51628 | - | 633 | WP_024671646.1 | recombinase family protein | - |
| HBB04_RS26140 () | 51669..52088 | - | 420 | WP_005769733.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HBB04_RS26145 () | 52085..52342 | - | 258 | WP_024671647.1 | Arc family DNA-binding protein | Antitoxin Detail |
| HBB04_RS26150 () | 52692..53348 | + | 657 | WP_017684244.1 | hypothetical protein | - |
| HBB04_RS26155 () | 53396..53650 | + | 255 | WP_024671648.1 | hypothetical protein | - |
| HBB04_RS26160 () | 54035..54574 | + | 540 | WP_024671649.1 | hypothetical protein | - |
| HBB04_RS26165 () | 54834..55475 | + | 642 | WP_191867948.1 | SOS response-associated peptidase | - |
| HBB04_RS26170 () | 55850..56098 | + | 249 | WP_055004694.1 | hypothetical protein | - |
| HBB04_RS26175 () | 56145..56405 | - | 261 | WP_191867949.1 | hypothetical protein | - |
| HBB04_RS26180 () | 56467..56700 | + | 234 | WP_024669557.1 | hypothetical protein | - |
| HBB04_RS26185 () | 56713..56964 | + | 252 | WP_019331343.1 | hypothetical protein | - |
| HBB04_RS26190 () | 56974..57702 | + | 729 | WP_055004693.1 | hypothetical protein | - |
| HBB04_RS26195 () | 57730..57918 | + | 189 | WP_024668774.1 | hypothetical protein | - |
| HBB04_RS26200 () | 58595..59491 | - | 897 | WP_055004698.1 | hypothetical protein | - |
| HBB04_RS26205 () | 59927..60898 | - | 972 | WP_103391643.1 | ExeA family protein | - |
| HBB04_RS26210 () | 60888..62546 | - | 1659 | WP_122356430.1 | DDE-type integrase/transposase/recombinase | - |
| HBB04_RS26215 () | 62530..63090 | - | 561 | WP_005782565.1 | recombinase family protein | - |
| HBB04_RS26220 () | 64118..64780 | + | 663 | WP_024668838.1 | hypothetical protein | - |
| HBB04_RS26225 () | 65300..65952 | + | 653 | Protein_73 | type III secretion system effector protein | - |
| HBB04_RS26230 () | 66130..66354 | + | 225 | WP_024668840.1 | carbon storage regulator | - |
| HBB04_RS26235 () | 66377..67339 | - | 963 | WP_024668544.1 | tyrosine-type recombinase/integrase | - |
| HBB04_RS26240 () | 67557..68057 | + | 501 | WP_054071650.1 | type VI secretion system tube protein Hcp | - |
| HBB04_RS26245 () | 68082..68609 | + | 528 | WP_183136725.1 | DUF2778 domain-containing protein | - |
| HBB04_RS26250 () | 68609..68896 | + | 288 | WP_024690793.1 | hypothetical protein | - |
| HBB04_RS26255 () | 68924..69697 | - | 774 | WP_024670604.1 | helix-turn-helix transcriptional regulator | - |
| HBB04_RS26260 () | 69806..70906 | + | 1101 | WP_122355340.1 | polyamine ABC transporter substrate-binding protein | - |
| HBB04_RS26265 () | 71212..71568 | - | 357 | WP_054990128.1 | helix-turn-helix domain-containing protein | - |
| HBB04_RS26270 () | 71813..72346 | + | 534 | WP_122355336.1 | transcriptional regulator | - |
| HBB04_RS26275 () | 72435..72677 | + | 243 | WP_183136724.1 | hypothetical protein | - |
| HBB04_RS26280 () | 72690..73406 | + | 717 | WP_122355333.1 | lytic transglycosylase domain-containing protein | - |
| HBB04_RS26285 () | 73406..73741 | + | 336 | WP_005746160.1 | hypothetical protein | - |
| HBB04_RS26290 () | 73754..74155 | + | 402 | Protein_86 | VirB3 family type IV secretion system protein | - |
| HBB04_RS26295 () | 74091..76643 | + | 2553 | WP_183136723.1 | conjugal transfer protein | - |
| HBB04_RS26300 () | 76640..77326 | + | 687 | WP_122355326.1 | P-type DNA transfer protein VirB5 | - |
| HBB04_RS26305 () | 77359..77712 | + | 354 | WP_122355324.1 | hypothetical protein | - |
| HBB04_RS26310 () | 77723..78655 | + | 933 | WP_122355322.1 | type IV secretion system protein | - |
| HBB04_RS26315 () | 78723..79025 | + | 303 | WP_122355320.1 | conjugal transfer protein | - |
| HBB04_RS26320 () | 79063..79851 | + | 789 | WP_122355318.1 | type IV secretion system protein | - |
| HBB04_RS26325 () | 79841..80650 | + | 810 | WP_191867950.1 | P-type conjugative transfer protein VirB9 | - |
| HBB04_RS26330 () | 80637..82004 | + | 1368 | WP_122356802.1 | conjugal transfer protein | - |
| HBB04_RS26335 () | 82014..83072 | + | 1059 | WP_122356800.1 | P-type DNA transfer ATPase VirB11 | - |
| HBB04_RS26340 () | 83082..83438 | + | 357 | WP_054986451.1 | hypothetical protein | - |
| HBB04_RS26345 () | 83563..83805 | + | 243 | WP_122356798.1 | hypothetical protein | - |
| HBB04_RS26350 () | 83805..84023 | + | 219 | WP_122356796.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HBB04_RS26355 () | 84020..84253 | + | 234 | WP_122356794.1 | hypothetical protein | - |
| HBB04_RS26360 () | 84253..85914 | + | 1662 | WP_122356792.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HBB04_RS26365 () | 85954..86316 | + | 363 | WP_024668911.1 | Killer protein | - |
| HBB04_RS26370 () | 86344..88509 | + | 2166 | WP_117216515.1 | type IA DNA topoisomerase | - |
| HBB04_RS26375 () | 88536..89300 | + | 765 | WP_053480610.1 | hypothetical protein | - |
| HBB04_RS26380 () | 89365..89970 | + | 606 | WP_074929414.1 | single-stranded DNA-binding protein | - |
| HBB04_RS26385 () | 90011..90295 | + | 285 | WP_191867951.1 | hypothetical protein | - |
| HBB04_RS26390 () | 90596..91330 | + | 735 | WP_053480615.1 | hypothetical protein | - |
| HBB04_RS26395 () | 91327..91899 | + | 573 | WP_122324620.1 | hypothetical protein | - |
| HBB04_RS26400 () | 91926..92465 | - | 540 | WP_074929365.1 | hypothetical protein | - |
| HBB04_RS26405 () | 92691..93416 | + | 726 | WP_122356788.1 | relaxosome protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|