MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 81537 bp
Accession: NZ_CP050175 Location: 1042767..1124303 Organism: Streptococcus pneumoniae strain PZ900701590 Replicon: chromosome
Accession: NZ_CP050175 Location: 1042767..1124303 Organism: Streptococcus pneumoniae strain PZ900701590 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HA248_RS05365 () | 1038603..1038974 | + | 372 | WP_001809343.1 | HAD-IB family phosphatase | - |
| HA248_RS05370 () | 1038919..1039248 | + | 330 | WP_001809344.1 | HAD hydrolase family protein | - |
| HA248_RS05375 () | 1039257..1040372 | + | 1116 | WP_033705239.1 | glycerate kinase | - |
| HA248_RS05380 () | 1040369..1040815 | - | 447 | WP_000131076.1 | YueI family protein | - |
| HA248_RS05385 () | 1040979..1042283 | + | 1305 | WP_000022813.1 | phosphopyruvate hydratase | - |
| HA248_RS05390 () | 1042421..1042867 | - | 447 | WP_001833728.1 | tyrosine-type recombinase/integrase | - |
| HA248_RS05395 () | 1042767..1043493 | - | 727 | Protein_1051 | transposase | - |
| HA248_RS05400 () | 1043664..1043819 | + | 156 | Protein_1052 | diacylglycerol kinase family lipid kinase | - |
| HA248_RS05405 () | 1044019..1047294 | + | 3276 | WP_033705242.1 | ATP-dependent nuclease subunit B | - |
| HA248_RS05410 () | 1047291..1050941 | + | 3651 | WP_033705243.1 | helicase-exonuclease AddAB subunit AddA | - |
| HA248_RS05415 () | 1051111..1052289 | + | 1179 | WP_000174753.1 | hypothetical protein | - |
| HA248_RS05420 () | 1052498..1058389 | + | 5892 | WP_000417171.1 | Immunoglobulin A1 protease | VF |
| HA248_RS11175 () | 1058441..1058548 | + | 108 | Protein_1057 | zinc metalloprotease | - |
| HA248_RS05430 () | 1059093..1059266 | + | 174 | WP_000159603.1 | hypothetical protein | - |
| HA248_RS05435 () | 1059263..1060042 | + | 780 | WP_000822769.1 | replication initiator protein A | - |
| HA248_RS05440 () | 1060141..1061499 | + | 1359 | WP_001210972.1 | DNA (cytosine-5-)-methyltransferase | - |
| HA248_RS05445 () | 1061483..1061932 | + | 450 | WP_000645881.1 | hypothetical protein | - |
| HA248_RS05450 () | 1061925..1062305 | + | 381 | WP_000566541.1 | hypothetical protein | - |
| HA248_RS05455 () | 1062318..1062551 | + | 234 | WP_000840776.1 | hypothetical protein | - |
| HA248_RS05460 () | 1062554..1063141 | + | 588 | WP_000821269.1 | CPBP family intramembrane metalloprotease | - |
| HA248_RS05465 () | 1063215..1063859 | + | 645 | WP_041974923.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| HA248_RS05470 () | 1063859..1064695 | + | 837 | WP_000492401.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| HA248_RS05475 () | 1064978..1065265 | + | 288 | WP_000869754.1 | hypothetical protein | - |
| HA248_RS05480 () | 1065267..1065755 | + | 489 | WP_033705459.1 | hypothetical protein | - |
| HA248_RS05485 () | 1065755..1067632 | + | 1878 | WP_001841744.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HA248_RS05490 () | 1067653..1067895 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| HA248_RS05495 () | 1067912..1068766 | + | 855 | WP_001054256.1 | conjugal transfer protein TrbL | - |
| HA248_RS05500 () | 1068820..1069179 | + | 360 | WP_001097590.1 | PrgI family protein | - |
| HA248_RS05505 () | 1069172..1071487 | + | 2316 | WP_000184454.1 | ATPase AAA | - |
| HA248_RS05510 () | 1071499..1074312 | + | 2814 | WP_033705457.1 | CHAP domain-containing protein | - |
| HA248_RS05520 () | 1074879..1075193 | + | 315 | WP_000420682.1 | YdcP family protein | - |
| HA248_RS05525 () | 1075209..1075595 | + | 387 | WP_000985015.1 | YdcP family protein | - |
| HA248_RS05530 () | 1075624..1077009 | + | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| HA248_RS05535 () | 1077012..1077164 | + | 153 | WP_000879507.1 | hypothetical protein | - |
| HA248_RS05540 () | 1077187..1078605 | + | 1419 | WP_001841741.1 | replication initiation factor domain-containing protein | - |
| HA248_RS05545 () | 1078654..1078737 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| HA248_RS05550 () | 1078862..1079599 | + | 738 | WP_001038795.1 | rRNA adenine N-6-methyltransferase | ARG |
| HA248_RS05555 () | 1079856..1081103 | - | 1248 | Protein_1082 | ISL3 family transposase IS1165 | Transposase |
| HA248_RS05560 () | 1081283..1081504 | + | 222 | WP_001009056.1 | hypothetical protein | - |
| HA248_RS05565 () | 1081621..1082118 | + | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| HA248_RS05570 () | 1082093..1082599 | + | 507 | WP_000506270.1 | conjugal transfer protein | - |
| HA248_RS05575 () | 1082583..1085030 | + | 2448 | WP_000331160.1 | ATP-binding protein | - |
| HA248_RS05580 () | 1085033..1087210 | + | 2178 | WP_166735693.1 | YtxH domain-containing protein | - |
| HA248_RS05585 () | 1087207..1088208 | + | 1002 | WP_033705455.1 | putative endopeptidase p60 | VF |
| HA248_RS05590 () | 1088223..1089137 | + | 915 | WP_033705454.1 | conjugal transfer protein | - |
| HA248_RS05595 () | 1089382..1089498 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| HA248_RS05600 () | 1089514..1091433 | + | 1920 | WP_000691743.1 | Tetracycline resistance protein TetM from transposon Tn916 | VF |
| HA248_RS05605 () | 1091552..1091719 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| HA248_RS05610 () | 1091779..1092132 | - | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| HA248_RS05615 () | 1092373..1093187 | - | 815 | Protein_1094 | IS5 family transposase IS1515 | Transposase |
| HA248_RS05620 () | 1093510..1093932 | + | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| HA248_RS05625 () | 1093929..1094159 | + | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| HA248_RS05630 () | 1094620..1094823 | + | 204 | WP_000814511.1 | excisionase | - |
| HA248_RS05635 () | 1094905..1096122 | + | 1218 | WP_001291561.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| HA248_RS05640 () | 1097008..1097739 | + | 732 | WP_000247939.1 | ABC transporter ATP-binding protein YxdL | VF |
| HA248_RS05645 () | 1097757..1099073 | + | 1317 | WP_000915988.1 | FtsX-like permease family protein | - |
| HA248_RS05650 () | 1099504..1099914 | + | 411 | WP_000387507.1 | thrombospondin type 3 repeat-containing protein | - |
| HA248_RS05655 () | 1099947..1106174 | + | 6228 | WP_166735694.1 | DEAD/DEAH box helicase family protein | - |
| HA248_RS05660 () | 1106249..1106533 | + | 285 | WP_000969645.1 | hypothetical protein | - |
| HA248_RS05665 () | 1106547..1106843 | + | 297 | WP_000998888.1 | hypothetical protein | - |
| HA248_RS05670 () | 1106857..1107054 | - | 198 | WP_074187117.1 | hypothetical protein | - |
| HA248_RS05675 () | 1107190..1107831 | + | 642 | WP_000933083.1 | hypothetical protein | - |
| HA248_RS05680 () | 1107841..1108926 | + | 1086 | WP_000401905.1 | toprim domain-containing protein | - |
| HA248_RS05685 () | 1108977..1109210 | + | 234 | WP_000152419.1 | hypothetical protein | - |
| HA248_RS05690 () | 1109207..1109590 | + | 384 | WP_000159213.1 | hypothetical protein | - |
| HA248_RS05695 () | 1109628..1109900 | + | 273 | WP_000495438.1 | hypothetical protein | - |
| HA248_RS05700 () | 1109968..1110444 | + | 477 | WP_000579623.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| HA248_RS05705 () | 1110444..1111214 | + | 771 | WP_000405354.1 | zeta toxin family protein | Toxin Detail |
| HA248_RS05710 () | 1111470..1112153 | + | 684 | WP_000492698.1 | LexA family transcriptional regulator | - |
| HA248_RS05715 () | 1112156..1113571 | + | 1416 | WP_000118332.1 | Y-family DNA polymerase | - |
| HA248_RS05720 () | 1113568..1113933 | + | 366 | WP_000981955.1 | hypothetical protein | - |
| HA248_RS05725 () | 1113923..1114213 | + | 291 | WP_001080184.1 | hypothetical protein | - |
| HA248_RS05730 () | 1114508..1114864 | + | 357 | WP_000827835.1 | hypothetical protein | - |
| HA248_RS05735 () | 1114869..1115234 | + | 366 | WP_000401236.1 | plasmid mobilization relaxosome protein MobC | - |
| HA248_RS05740 () | 1115221..1117050 | + | 1830 | WP_000237134.1 | relaxase/mobilization nuclease domain-containing protein | - |
| HA248_RS05745 () | 1117154..1117381 | + | 228 | WP_000919632.1 | helix-turn-helix domain-containing protein | - |
| HA248_RS05750 () | 1117648..1117881 | + | 234 | WP_001022845.1 | hypothetical protein | - |
| HA248_RS05755 () | 1117966..1119474 | + | 1509 | WP_000291923.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| HA248_RS05760 () | 1119556..1120407 | + | 852 | WP_000201315.1 | Ribosome biogenesis GTPase A | VF |
| HA248_RS05765 () | 1120394..1121173 | + | 780 | WP_000201135.1 | ribonuclease HII | - |
| HA248_RS05770 () | 1121189..1122739 | + | 1551 | WP_000392544.1 | ClC family H(+)/Cl(-) exchange transporter | - |
| HA248_RS05775 () | 1123233..1124303 | + | 1071 | WP_000817886.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| HA248_RS05780 () | 1124376..1125365 | - | 990 | WP_000873987.1 | lipoate--protein ligase | - |
| HA248_RS05785 () | 1125429..1127114 | - | 1686 | WP_001821552.1 | dihydrolipoyl dehydrogenase | - |
| HA248_RS05790 () | 1127178..1128221 | - | 1044 | WP_000752698.1 | dihydrolipoamide acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|