MGE detailed information
MGE type: Prophage MGE length: 52478 bp
Accession: NZ_CP050036 Location: 1969697..2022174 Organism: Escherichia coli strain 58-3 Replicon: chromosome
Accession: NZ_CP050036 Location: 1969697..2022174 Organism: Escherichia coli strain 58-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9P49_RS09420 () | 1964740..1965168 | - | 429 | WP_182116891.1 | lysozyme inhibitor LprI family protein | - |
| G9P49_RS09425 () | 1965345..1967078 | - | 1734 | WP_001025322.1 | arginine--tRNA ligase | - |
| G9P49_RS09430 () | 1967294..1967860 | + | 567 | WP_001326725.1 | VOC family protein | - |
| G9P49_RS09435 () | 1967874..1968620 | + | 747 | WP_001185741.1 | copper homeostasis protein CutC | - |
| G9P49_RS09440 () | 1969008..1969241 | + | 234 | Protein_1840 | NapC/NirT family cytochrome c | - |
| G9P49_RS09445 () | 1969293..1969990 | + | 698 | Protein_1841 | IS1 family transposase | - |
| G9P49_RS09450 () | 1970006..1970416 | + | 411 | Protein_1842 | NapC/NirT family cytochrome c | - |
| G9P49_RS09455 () | 1970432..1971129 | - | 698 | Protein_1843 | IS1-like element IS1A family transposase | - |
| G9P49_RS09460 () | 1971186..1971497 | + | 312 | Protein_1844 | cytochrome C | - |
| G9P49_RS09465 () | 1971522..1973951 | + | 2430 | WP_113305127.1 | trimethylamine N-oxide reductase TorZ | - |
| G9P49_RS09470 () | 1974116..1975087 | - | 972 | WP_094322550.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| G9P49_RS09475 () | 1975084..1975827 | - | 744 | WP_000019590.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| G9P49_RS09480 () | 1975868..1976263 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| G9P49_RS09485 () | 1976316..1977134 | - | 819 | WP_000639274.1 | DUF72 domain-containing protein | - |
| G9P49_RS09490 () | 1977131..1977697 | - | 567 | WP_000891621.1 | hydrolase | - |
| G9P49_RS09495 () | 1978007..1979779 | + | 1773 | WP_094317032.1 | aspartate--tRNA ligase | - |
| G9P49_RS09500 () | 1979897..1980349 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| G9P49_RS09505 () | 1980378..1981118 | + | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| G9P49_RS09510 () | 1981153..1981674 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| G9P49_RS09515 () | 1981676..1982278 | - | 603 | WP_182116892.1 | YebB family permuted papain-like enzyme | - |
| G9P49_RS09520 () | 1982390..1983087 | - | 698 | Protein_1856 | IS1-like element IS1A family transposase | - |
| G9P49_RS09525 () | 1983137..1983190 | + | 54 | WP_106426695.1 | stress response small protein YobI | - |
| G9P49_RS09530 () | 1983329..1983940 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| G9P49_RS09535 () | 1983949..1984959 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| G9P49_RS09540 () | 1985203..1985988 | - | 786 | WP_000571479.1 | zinc ABC transporter permease subunit ZnuB | - |
| G9P49_RS09545 () | 1985985..1986740 | - | 756 | WP_000202996.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| G9P49_RS09550 () | 1986819..1987751 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| G9P49_RS09555 () | 1987767..1989089 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| G9P49_RS09560 () | 1989209..1990180 | + | 972 | WP_000448381.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| G9P49_RS09565 () | 1990311..1991753 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| G9P49_RS09570 () | 1991881..1992750 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| G9P49_RS09575 () | 1993088..1994563 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| G9P49_RS09580 () | 1994798..1996609 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| G9P49_RS09585 () | 1996646..1997287 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G9P49_RS09590 () | 1997343..1998521 | - | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G9P49_RS09595 () | 1998655..1998945 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| G9P49_RS09600 () | 1999012..1999368 | + | 357 | WP_001295500.1 | protein YebF | - |
| G9P49_RS09605 () | 1999695..2000354 | + | 660 | WP_000024746.1 | tellurite resistance TerB family protein | - |
| G9P49_RS09610 () | 2000563..2002623 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| G9P49_RS09615 () | 2002620..2003282 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| G9P49_RS09620 () | 2003306..2003962 | - | 657 | WP_182116893.1 | carbon-nitrogen hydrolase family protein | - |
| G9P49_RS09625 () | 2004064..2004294 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G9P49_RS09630 () | 2004433..2004807 | + | 375 | WP_094322552.1 | CopC domain-containing protein YobA | - |
| G9P49_RS09635 () | 2004811..2005683 | + | 873 | WP_094322553.1 | copper homeostasis membrane protein CopD | - |
| G9P49_RS09640 () | 2005696..2006037 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2006065..2006336 | - | 272 | - | - | Antitoxin Detail |
| - () | 2006195..2006298 | + | 104 | - | - | Toxin Detail |
| G9P49_RS09645 () | 2006433..2007089 | + | 657 | WP_000812732.1 | protein-serine/threonine phosphatase | - |
| G9P49_RS09650 () | 2007090..2007281 | - | 192 | WP_001338167.1 | YebW family protein | - |
| G9P49_RS09655 () | 2007386..2007622 | - | 237 | WP_001338166.1 | DUF1480 family protein | - |
| G9P49_RS09660 () | 2007740..2009179 | - | 1440 | WP_001351758.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G9P49_RS09665 () | 2009259..2011892 | - | 2634 | WP_001297532.1 | lipid-binding membrane homeostasis protein YebT | - |
| G9P49_RS09670 () | 2011861..2013144 | - | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| G9P49_RS09675 () | 2013274..2013771 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| G9P49_RS09680 () | 2013868..2014566 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| G9P49_RS09685 () | 2014586..2016634 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| G9P49_RS09690 () | 2016826..2017707 | + | 882 | WP_000984517.1 | protease HtpX | - |
| G9P49_RS09695 () | 2017753..2019126 | - | 1374 | WP_001351757.1 | MFS transporter | - |
| G9P49_RS09700 () | 2019303..2020094 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| G9P49_RS09705 () | 2020237..2020476 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| G9P49_RS09710 () | 2020635..2020778 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| G9P49_RS09715 () | 2020853..2021140 | + | 288 | WP_001006866.1 | YebO family protein | - |
| G9P49_RS09720 () | 2021809..2021952 | + | 144 | WP_001295496.1 | YobF family protein | - |
| G9P49_RS09725 () | 2021965..2022174 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| G9P49_RS09730 () | 2022340..2023149 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| G9P49_RS09735 () | 2023146..2023712 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| G9P49_RS09740 () | 2024141..2024599 | - | 459 | WP_101356931.1 | DUF986 family protein | - |
| G9P49_RS09745 () | 2024654..2025505 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| G9P49_RS09750 () | 2025518..2026318 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|