MGE detailed information
MGE type: Prophage MGE length: 50437 bp
Accession: NZ_CP050031 Location: 2278958..2329394 Organism: Escherichia coli strain 33-6 Replicon: chromosome
Accession: NZ_CP050031 Location: 2278958..2329394 Organism: Escherichia coli strain 33-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9P48_RS10975 () | 2274857..2276077 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| G9P48_RS10980 () | 2276202..2276897 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| G9P48_RS10985 () | 2276850..2278142 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| G9P48_RS10990 () | 2278301..2278915 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| G9P48_RS10995 () | 2278958..2279812 | - | 855 | WP_094322617.1 | dimethyl sulfoxide reductase anchor subunit | - |
| G9P48_RS11000 () | 2279814..2280431 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| G9P48_RS11005 () | 2280442..2282865 | - | 2424 | WP_094322623.1 | dimethyl sulfoxide reductase subunit A | - |
| G9P48_RS11010 () | 2282926..2285352 | - | 2427 | WP_094322618.1 | dimethyl sulfoxide reductase subunit A | - |
| G9P48_RS11015 () | 2285551..2285856 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| G9P48_RS11020 () | 2285964..2286674 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| G9P48_RS11025 () | 2286677..2287237 | - | 561 | WP_001138582.1 | spermidine N1-acetyltransferase | - |
| G9P48_RS11030 () | 2287272..2287613 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| G9P48_RS11035 () | 2287748..2288074 | + | 327 | WP_001469615.1 | YnfA family protein | - |
| G9P48_RS11040 () | 2288280..2289494 | + | 1215 | WP_094322620.1 | starvation-sensing protein RspA | - |
| G9P48_RS11045 () | 2289506..2290525 | + | 1020 | WP_038988672.1 | Zn-dependent oxidoreductase | - |
| G9P48_RS11050 () | 2290583..2290693 | + | 111 | WP_021531328.1 | hypothetical protein | - |
| G9P48_RS11055 () | 2290713..2291993 | - | 1281 | WP_000876979.1 | Putative defective protein IntQ ; Integrase | Integrase |
| G9P48_RS11060 () | 2292028..2292279 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| G9P48_RS11065 () | 2292352..2294823 | - | 2472 | WP_182116903.1 | exonuclease | - |
| G9P48_RS11070 () | 2294917..2295009 | - | 93 | Protein_2163 | lysis protein YdfD | - |
| G9P48_RS11075 () | 2295066..2295763 | + | 698 | Protein_2164 | IS1 family transposase IS1A | Transposase |
| G9P48_RS11080 () | 2295779..2295844 | - | 66 | Protein_2165 | lysis protein YdfD | - |
| G9P48_RS11085 () | 2295841..2296029 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| G9P48_RS11090 () | 2296597..2296815 | - | 219 | WP_001171952.1 | hypothetical protein | - |
| G9P48_RS11095 () | 2296975..2297130 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| G9P48_RS11100 () | 2297299..2297706 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| G9P48_RS11105 () | 2297788..2298015 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| G9P48_RS11110 () | 2297999..2298520 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| G9P48_RS11115 () | 2298501..2299466 | + | 966 | WP_139570011.1 | hypothetical protein | - |
| G9P48_RS11120 () | 2299507..2299929 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| G9P48_RS11125 () | 2299926..2300282 | + | 357 | WP_182116904.1 | class I SAM-dependent methyltransferase | - |
| G9P48_RS11130 () | 2300893..2301179 | + | 287 | Protein_2175 | hypothetical protein | - |
| G9P48_RS11135 () | 2301948..2303288 | + | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| G9P48_RS11140 () | 2303725..2304057 | - | 333 | WP_001301033.1 | protein FlxA | - |
| G9P48_RS11145 () | 2304260..2304565 | - | 306 | WP_071593935.1 | hypothetical protein | - |
| G9P48_RS11150 () | 2304590..2304829 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| G9P48_RS11155 () | 2304829..2305116 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| G9P48_RS11160 () | 2305188..2305343 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G9P48_RS11165 () | 2305560..2305811 | + | 252 | WP_001463433.1 | hypothetical protein | - |
| G9P48_RS11170 () | 2305878..2306156 | + | 279 | WP_001515373.1 | hypothetical protein | - |
| G9P48_RS11175 () | 2306158..2307207 | + | 1050 | WP_182116905.1 | DUF968 domain-containing protein | - |
| G9P48_RS11180 () | 2307225..2307602 | + | 378 | WP_001204787.1 | antitermination protein | - |
| G9P48_RS11185 () | 2307758..2308282 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| G9P48_RS11190 () | 2308475..2309434 | + | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| G9P48_RS11195 () | 2309750..2310861 | - | 1112 | Protein_2188 | IS3 family transposase IS2 | Transposase |
| G9P48_RS11200 () | 2310927..2312089 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| G9P48_RS11205 () | 2312120..2312284 | - | 165 | Protein_2190 | IS3 family transposase IS2 | Transposase |
| G9P48_RS11210 () | 2312438..2313151 | + | 714 | WP_182116906.1 | HTH-type transcriptional regulator GadW | VF |
| G9P48_RS11215 () | 2313342..2313557 | + | 216 | WP_001515371.1 | phage lysis protein EssD | - |
| G9P48_RS11220 () | 2313562..2313876 | + | 315 | WP_001515370.1 | YdfR family protein | - |
| G9P48_RS11225 () | 2313932..2314465 | + | 534 | Protein_2194 | lysozyme | - |
| G9P48_RS11230 () | 2314462..2314778 | + | 317 | Protein_2195 | DUF2514 family protein | - |
| G9P48_RS11235 () | 2314844..2316006 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| G9P48_RS11240 () | 2316034..2316219 | + | 186 | Protein_2197 | DUF2514 family protein | - |
| G9P48_RS11245 () | 2316582..2316794 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| G9P48_RS11250 () | 2316805..2316993 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| G9P48_RS11255 () | 2316996..2317061 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| G9P48_RS11260 () | 2317140..2317295 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| G9P48_RS11265 () | 2317467..2317640 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| G9P48_RS11270 () | 2317792..2318202 | - | 411 | WP_182116907.1 | DUF1398 domain-containing protein | - |
| G9P48_RS11275 () | 2318260..2318493 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| G9P48_RS11280 () | 2318881..2319426 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| G9P48_RS11285 () | 2319401..2321326 | + | 1926 | WP_094322472.1 | phage terminase large subunit family protein | - |
| G9P48_RS11290 () | 2321323..2321529 | + | 207 | WP_000198149.1 | gpW family protein | - |
| G9P48_RS11295 () | 2321526..2321957 | + | 432 | Protein_2208 | phage portal protein | - |
| G9P48_RS11300 () | 2321949..2322860 | + | 912 | WP_172440531.1 | phage tail protein | - |
| G9P48_RS11305 () | 2322860..2323435 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| G9P48_RS11310 () | 2323533..2324123 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| G9P48_RS11315 () | 2324440..2324673 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| G9P48_RS11320 () | 2324742..2324855 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| G9P48_RS11325 () | 2325460..2326743 | + | 1284 | Protein_2214 | MHS family MFS transporter YdfJ | - |
| G9P48_RS11330 () | 2326832..2328292 | + | 1461 | Protein_2215 | mannitol dehydrogenase family protein | - |
| G9P48_RS11335 () | 2328328..2328531 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G9P48_RS11340 () | 2328708..2329394 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| G9P48_RS11345 () | 2329483..2330229 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| G9P48_RS11350 () | 2330366..2332411 | + | 2046 | WP_094322483.1 | peptidyl-dipeptidase Dcp | - |
| G9P48_RS11355 () | 2332456..2332974 | - | 519 | WP_094322477.1 | 2-oxo-tetronate isomerase | - |
| G9P48_RS11360 () | 2333250..2333642 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|