MGE detailed information
MGE type: Genomic_island MGE length: 22504 bp
Accession: NZ_CP050009 Location: 4484778..4507281 Organism: Citrobacter sp. Y3 Replicon: chromosome
Accession: NZ_CP050009 Location: 4484778..4507281 Organism: Citrobacter sp. Y3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HAP28_RS21720 () | 4480411..4481409 | + | 999 | WP_042999273.1 | autoinducer 2 ABC transporter permease LsrD | - |
| HAP28_RS21725 () | 4481436..4482458 | + | 1023 | WP_109739499.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| HAP28_RS21730 () | 4482487..4483362 | + | 876 | WP_000774153.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| HAP28_RS21735 () | 4483411..4483701 | + | 291 | WP_044264508.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| HAP28_RS21740 () | 4483712..4484458 | + | 747 | WP_109739500.1 | epimerase | - |
| HAP28_RS21745 () | 4484778..4485575 | - | 798 | WP_109739501.1 | hypothetical protein | VF |
| HAP28_RS21750 () | 4485808..4486641 | - | 834 | WP_109739502.1 | DUF4942 domain-containing protein | - |
| HAP28_RS21755 () | 4486757..4487098 | - | 342 | WP_109739503.1 | TA system toxin CbtA family protein | Toxin Detail |
| HAP28_RS21760 () | 4487119..4487436 | - | 318 | WP_109739504.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HAP28_RS21765 () | 4487455..4487676 | - | 222 | WP_109739505.1 | DUF987 domain-containing protein | - |
| HAP28_RS21770 () | 4487685..4488161 | - | 477 | WP_109739506.1 | RadC family protein | - |
| HAP28_RS21775 () | 4488177..4488635 | - | 459 | WP_109739507.1 | antirestriction protein | - |
| HAP28_RS21780 () | 4488732..4488971 | - | 240 | WP_109739508.1 | DUF905 domain-containing protein | - |
| HAP28_RS21785 () | 4489049..4489522 | - | 474 | WP_109739509.1 | hypothetical protein | - |
| HAP28_RS21790 () | 4489544..4490383 | - | 840 | WP_109739510.1 | hypothetical protein | - |
| HAP28_RS21795 () | 4490422..4491123 | - | 702 | WP_109739511.1 | WYL domain-containing protein | - |
| HAP28_RS21800 () | 4491340..4492161 | - | 822 | WP_109739512.1 | DUF945 domain-containing protein | - |
| HAP28_RS21805 () | 4492253..4493116 | - | 864 | WP_109739513.1 | GTPase family protein | - |
| HAP28_RS21810 () | 4493220..4494407 | - | 1188 | WP_109739514.1 | hypothetical protein | - |
| HAP28_RS21815 () | 4495004..4495591 | + | 588 | WP_109739515.1 | inovirus-type Gp2 protein | - |
| HAP28_RS21820 () | 4495694..4495900 | + | 207 | WP_069219349.1 | AlpA family phage regulatory protein | - |
| HAP28_RS21825 () | 4496430..4497658 | + | 1229 | WP_110129298.1 | IS3 family transposase ISEc27 | Transposase |
| HAP28_RS21830 () | 4497669..4498394 | - | 726 | Protein_4283 | toll/interleukin-1 receptor domain-containing protein | - |
| HAP28_RS21835 () | 4498620..4502033 | + | 3414 | WP_109739517.1 | DEAD/DEAH box helicase family protein | - |
| HAP28_RS21840 () | 4502097..4503731 | + | 1635 | WP_109739518.1 | type I restriction-modification system subunit M | - |
| HAP28_RS21845 () | 4503728..4504933 | + | 1206 | WP_197710853.1 | restriction endonuclease subunit S | - |
| HAP28_RS21850 () | 4505125..4505462 | + | 338 | Protein_4287 | 5'-nucleotidase | - |
| HAP28_RS21855 () | 4505473..4507287 | - | 1815 | WP_109739519.1 | AAA family ATPase | - |
| HAP28_RS21860 () | 4507614..4508489 | - | 876 | WP_109739520.1 | HNH endonuclease | - |
| HAP28_RS21865 () | 4508704..4509969 | - | 1266 | WP_109739521.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HAP28_RS21875 () | 4510442..4511461 | + | 1020 | WP_042999265.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| HAP28_RS21880 () | 4511486..4512028 | - | 543 | WP_044264649.1 | gluconokinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|