MGE detailed information
MGE type: Genomic_island MGE length: 15944 bp
Accession: NZ_CP049979 Location: 1226527..1242470 Organism: Escherichia coli strain IBS28 Replicon: chromosome
Accession: NZ_CP049979 Location: 1226527..1242470 Organism: Escherichia coli strain IBS28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HAP53_RS05740 () | 1222024..1222395 | + | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| HAP53_RS05745 () | 1222392..1222997 | + | 606 | WP_001255030.1 | type II secretion system minor pseudopilin GspJ | - |
| HAP53_RS05750 () | 1222994..1223970 | + | 977 | Protein_1104 | type II secretion system minor pseudopilin GspK | - |
| HAP53_RS05755 () | 1223967..1225145 | + | 1179 | WP_000094989.1 | type II secretion system protein GspL | - |
| HAP53_RS05760 () | 1225147..1225683 | + | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| HAP53_RS05765 () | 1225964..1226245 | - | 282 | Protein_1107 | DUF4942 domain-containing protein | - |
| HAP53_RS05770 () | 1226527..1227531 | - | 1005 | WP_001179707.1 | IS110 family transposase ISSfl8 | Transposase |
| HAP53_RS05775 () | 1227603..1227890 | - | 288 | Protein_1109 | DUF4942 domain-containing protein | - |
| HAP53_RS05780 () | 1227987..1228184 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| HAP53_RS05785 () | 1228196..1228684 | - | 489 | WP_000777553.1 | hypothetical protein | - |
| HAP53_RS05790 () | 1228681..1229055 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| HAP53_RS05795 () | 1229145..1229513 | - | 369 | WP_024178267.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HAP53_RS05800 () | 1229676..1229897 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HAP53_RS05805 () | 1229960..1230436 | - | 477 | WP_001186727.1 | RadC family protein | - |
| HAP53_RS05810 () | 1230452..1230937 | - | 486 | WP_000849582.1 | antirestriction protein | - |
| HAP53_RS05815 () | 1230992..1231810 | - | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| HAP53_RS05820 () | 1231910..1232143 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| HAP53_RS05825 () | 1232222..1232677 | - | 456 | WP_000581504.1 | hypothetical protein | - |
| HAP53_RS05830 () | 1232753..1235269 | - | 2517 | WP_001315618.1 | hypothetical protein | - |
| HAP53_RS05835 () | 1235390..1238512 | - | 3123 | WP_165895610.1 | autotransporter adhesin Ag43 | - |
| HAP53_RS05840 () | 1238884..1239756 | - | 873 | WP_165895611.1 | GTPase family protein | - |
| HAP53_RS05845 () | 1240986..1242470 | + | 1485 | WP_001368210.1 | DUF3987 domain-containing protein | - |
| HAP53_RS05850 () | 1242788..1243390 | - | 603 | WP_000804452.1 | hypothetical protein | - |
| HAP53_RS05855 () | 1243477..1243683 | - | 207 | WP_000957424.1 | AlpA family transcriptional regulator | - |
| HAP53_RS05860 () | 1244442..1244591 | + | 150 | WP_071527034.1 | hemolysin activation protein | - |
| HAP53_RS05865 () | 1245006..1245206 | - | 201 | WP_001347328.1 | zinc-ribbon domain-containing protein | - |
| HAP53_RS05870 () | 1245406..1245975 | + | 570 | WP_000221531.1 | inovirus Gp2 family protein | - |
| HAP53_RS05875 () | 1246142..1246543 | + | 402 | WP_000271017.1 | hypothetical protein | - |
| HAP53_RS05880 () | 1246531..1246965 | + | 435 | WP_155955738.1 | zinc-ribbon domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|