MGE detailed information
MGE type: Conjugative plasmid MGE length: 109478 bp
Accession: NZ_CP049846 Location: 1..109478 Organism: Escherichia coli strain UPEC-245U/190328 Replicon: plasmid pEcoUTI1f
Accession: NZ_CP049846 Location: 1..109478 Organism: Escherichia coli strain UPEC-245U/190328 Replicon: plasmid pEcoUTI1f
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9W35_RS24420 (G9W35_24295) | 1..873 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| G9W35_RS24425 (G9W35_24300) | 1778..2062 | + | 285 | WP_024188746.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| G9W35_RS24430 (G9W35_24305) | 2062..2337 | + | 276 | WP_001620845.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G9W35_RS24435 (G9W35_24310) | 2447..2650 | + | 204 | Protein_3 | hypothetical protein | - |
| G9W35_RS24440 | 2919..3185 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| G9W35_RS24445 | 3185..3403 | - | 219 | Protein_5 | hypothetical protein | - |
| G9W35_RS24450 (G9W35_24315) | 3431..4033 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| G9W35_RS24455 (G9W35_24320) | 4209..5261 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| G9W35_RS24460 (G9W35_24325) | 5474..6064 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| G9W35_RS24465 (G9W35_24330) | 6064..6318 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| G9W35_RS24470 (G9W35_24335) | 6586..8085 | + | 1500 | WP_001542563.1 | RES family NAD+ phosphorylase | - |
| G9W35_RS24475 (G9W35_24340) | 8110..8973 | - | 864 | WP_000654832.1 | hypothetical protein | - |
| G9W35_RS24480 (G9W35_24345) | 9496..9909 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| G9W35_RS24485 (G9W35_24350) | 9911..10690 | + | 780 | WP_032188705.1 | site-specific integrase | - |
| G9W35_RS24490 (G9W35_24355) | 10870..11514 | + | 645 | WP_001144036.1 | ParA family protein | - |
| G9W35_RS24495 (G9W35_24360) | 11601..11909 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| G9W35_RS24500 (G9W35_24365) | 12323..13303 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| G9W35_RS24505 (G9W35_24370) | 13296..13712 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| G9W35_RS24510 (G9W35_24375) | 13714..14988 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| G9W35_RS24515 (G9W35_24380) | 14988..15425 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| G9W35_RS24520 (G9W35_24385) | 15422..15670 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| G9W35_RS24525 (G9W35_24390) | 16089..16991 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| G9W35_RS24530 (G9W35_24395) | 16988..17299 | + | 312 | WP_031935767.1 | hypothetical protein | - |
| G9W35_RS24535 (G9W35_24400) | 17375..18058 | + | 684 | WP_000086137.1 | DNA methylase | - |
| G9W35_RS24540 (G9W35_24405) | 18059..18280 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| G9W35_RS24545 (G9W35_24410) | 18210..18728 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| G9W35_RS24550 (G9W35_24415) | 18773..19543 | + | 771 | WP_001006204.1 | hypothetical protein | - |
| G9W35_RS24555 (G9W35_24430) | 19959..20384 | + | 426 | WP_001198900.1 | antirestriction protein | - |
| G9W35_RS24560 (G9W35_24435) | 20431..20853 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| G9W35_RS24565 (G9W35_24440) | 20850..21041 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| G9W35_RS24570 (G9W35_24445) | 21813..22340 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| G9W35_RS24575 (G9W35_24450) | 22398..22631 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| G9W35_RS24580 (G9W35_24455) | 22690..24648 | + | 1959 | WP_001145476.1 | ParB/RepB/Spo0J family partition protein | - |
| G9W35_RS24585 (G9W35_24460) | 24703..25137 | + | 435 | WP_000845903.1 | conjugation system SOS inhibitor PsiB | - |
| G9W35_RS24590 (G9W35_24465) | 25134..25853 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| G9W35_RS24595 (G9W35_24470) | 25850..26446 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| G9W35_RS24600 (G9W35_24480) | 26908..27408 | + | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| G9W35_RS24605 (G9W35_24485) | 28141..28575 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| G9W35_RS24610 (G9W35_24490) | 28668..28934 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| G9W35_RS24615 (G9W35_24495) | 29111..29500 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| G9W35_RS24620 (G9W35_24500) | 29497..30423 | + | 927 | WP_000038335.1 | Recombination-promoting nuclease RpnA | VF |
| G9W35_RS24625 (G9W35_24505) | 30423..30668 | + | 246 | WP_001260883.1 | hypothetical protein | - |
| G9W35_RS24630 (G9W35_24510) | 30699..30950 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| G9W35_RS24635 (G9W35_24515) | 31531..32379 | + | 849 | WP_048257176.1 | DUF4942 domain-containing protein | - |
| G9W35_RS24640 (G9W35_24520) | 32465..32800 | - | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| G9W35_RS24645 (G9W35_24525) | 33033..33365 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| G9W35_RS24650 (G9W35_24530) | 33377..36088 | + | 2712 | WP_000991384.1 | Protein TraI | Relaxase |
| G9W35_RS24655 (G9W35_24535) | 36156..36587 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| G9W35_RS24660 (G9W35_24540) | 37529..37768 | + | 240 | WP_001353740.1 | DUF1819 family protein | - |
| G9W35_RS24665 (G9W35_24545) | 37956..38933 | - | 978 | Protein_49 | Tyrosine recombinase XerH | VF |
| G9W35_RS24670 (G9W35_24550) | 39265..39738 | + | 474 | WP_000777554.1 | Dihydrofolate reductase type 1 | ARG |
| G9W35_RS24675 (G9W35_24555) | 39833..40357 | + | 525 | WP_000704156.1 | streptothricin N-acetyltransferase Sat2 | - |
| G9W35_RS24680 (G9W35_24560) | 40415..41250 | + | 836 | Protein_52 | Streptomycin 3''-adenylyltransferase | ARG |
| G9W35_RS24685 (G9W35_24565) | 41279..41776 | + | 498 | WP_001444089.1 | hypothetical protein | VF |
| G9W35_RS24690 (G9W35_24570) | 41837..42208 | + | 372 | WP_000119696.1 | hypothetical protein | - |
| G9W35_RS24695 (G9W35_24575) | 42618..42995 | + | 378 | WP_001271300.1 | hypothetical protein | - |
| G9W35_RS24700 (G9W35_24580) | 43018..43170 | + | 153 | Protein_56 | IS256 family transposase | - |
| G9W35_RS24705 (G9W35_24585) | 43226..44842 | - | 1617 | WP_000251879.1 | Tn7-like element transposition protein TnsE | - |
| G9W35_RS24710 (G9W35_24590) | 44843..46369 | - | 1527 | WP_001243518.1 | TnsD family Tn7-like transposition protein | - |
| G9W35_RS24715 (G9W35_24595) | 46372..48039 | - | 1668 | WP_001276994.1 | AAA family ATPase | - |
| G9W35_RS24720 (G9W35_24600) | 48036..50144 | - | 2109 | WP_000267723.1 | DDE-type integrase/transposase/recombinase | - |
| G9W35_RS24725 (G9W35_24605) | 50131..50952 | - | 822 | WP_001029679.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| G9W35_RS24730 (G9W35_24610) | 51085..52443 | + | 1359 | Protein_62 | IS91 family transposase ISVsa3 | Transposase |
| G9W35_RS24735 (G9W35_24620) | 52679..52921 | - | 243 | Protein_63 | phosphoglucosamine mutase | - |
| G9W35_RS24740 (G9W35_24625) | 53008..53823 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| G9W35_RS24745 (G9W35_24640) | 54687..56990 | - | 2304 | WP_000077663.1 | F-type conjugative transfer protein TrbC | - |
| G9W35_RS24750 (G9W35_24645) | 56971..58095 | - | 1125 | WP_000152378.1 | DsbC family protein | - |
| G9W35_RS24755 (G9W35_24650) | 58092..59399 | - | 1308 | WP_000121918.1 | IncI1-type conjugal transfer protein TrbA | - |
| G9W35_RS24760 (G9W35_24655) | 59737..59883 | + | 147 | WP_001346191.1 | hypothetical protein | - |
| G9W35_RS26220 | 59936..60031 | + | 96 | WP_001388983.1 | DinQ-like type I toxin DqlB | - |
| G9W35_RS26225 | 60620..60715 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| G9W35_RS24770 (G9W35_24665) | 60778..60954 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| G9W35_RS24775 (G9W35_24670) | 61104..61571 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| G9W35_RS24780 (G9W35_24675) | 61730..62353 | + | 624 | WP_001155252.1 | helix-turn-helix domain-containing protein | - |
| G9W35_RS24785 (G9W35_24680) | 62551..62766 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| G9W35_RS24790 (G9W35_24685) | 62770..63138 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| G9W35_RS24795 (G9W35_24690) | 63150..63341 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| G9W35_RS24800 (G9W35_24695) | 63429..63671 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| G9W35_RS24805 (G9W35_24700) | 64001..64153 | + | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| G9W35_RS24810 (G9W35_24705) | 64291..65877 | - | 1587 | WP_000004563.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| G9W35_RS24815 (G9W35_24710) | 66151..66804 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| G9W35_RS24820 (G9W35_24715) | 66892..69057 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| G9W35_RS24825 (G9W35_24720) | 69132..69701 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| G9W35_RS24830 (G9W35_24725) | 69698..70903 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| G9W35_RS24835 (G9W35_24730) | 70861..71481 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| G9W35_RS24840 (G9W35_24735) | 71481..74525 | - | 3045 | WP_221522812.1 | ATP-binding protein | - |
| G9W35_RS24845 (G9W35_24740) | 74820..75638 | - | 819 | WP_072105968.1 | conjugal transfer protein TraT | - |
| G9W35_RS26230 (G9W35_24745) | 75553..75804 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| G9W35_RS24855 (G9W35_24750) | 75861..76259 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| G9W35_RS24860 (G9W35_24755) | 76306..76836 | - | 531 | WP_000987021.1 | conjugal transfer protein TraQ | - |
| G9W35_RS24865 (G9W35_24760) | 76833..77546 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| G9W35_RS24870 (G9W35_24765) | 77543..78880 | - | 1338 | WP_001272018.1 | conjugal transfer protein TraO | - |
| G9W35_RS24875 (G9W35_24770) | 78884..79858 | - | 975 | WP_000547385.1 | hypothetical protein | VF |
| G9W35_RS24880 (G9W35_24775) | 79869..80564 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| G9W35_RS24885 (G9W35_24780) | 80576..80926 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| G9W35_RS24890 (G9W35_24785) | 80943..85004 | - | 4062 | WP_000842453.1 | DUF5710 domain-containing protein | - |
| G9W35_RS24895 (G9W35_24790) | 85068..85358 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| G9W35_RS24900 (G9W35_24795) | 85355..86503 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| G9W35_RS24905 (G9W35_24800) | 86487..87323 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| G9W35_RS24910 (G9W35_24805) | 87320..87778 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| G9W35_RS24915 (G9W35_24810) | 87882..89084 | - | 1203 | WP_000979994.1 | conjugal transfer protein TraF | - |
| G9W35_RS24920 (G9W35_24815) | 89186..90007 | - | 822 | WP_221522813.1 | conjugal transfer protein TraE | - |
| G9W35_RS24925 | 90172..90366 | - | 195 | Protein_102 | integrase | - |
| G9W35_RS24930 (G9W35_24820) | 90480..91841 | - | 1362 | WP_001168171.1 | hypothetical protein | VF |
| G9W35_RS24935 (G9W35_24825) | 91859..92485 | - | 627 | WP_000939245.1 | prepilin peptidase | - |
| G9W35_RS24940 (G9W35_24830) | 92501..92986 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| G9W35_RS24945 (G9W35_24835) | 93031..93567 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| G9W35_RS24950 (G9W35_24840) | 93629..93784 | - | 156 | WP_001411034.1 | hypothetical protein | - |
| G9W35_RS24955 (G9W35_24845) | 93901..94305 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| G9W35_RS24960 (G9W35_24850) | 94302..94649 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| G9W35_RS24965 (G9W35_24855) | 94698..96236 | + | 1539 | WP_221522814.1 | IS66 family transposase ISEc22 | Transposase |
| G9W35_RS24970 (G9W35_24860) | 96247..97185 | - | 939 | WP_249756339.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| G9W35_RS24975 (G9W35_24865) | 97187..98695 | - | 1509 | WP_000880807.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| G9W35_RS24980 (G9W35_24870) | 98798..99256 | - | 459 | WP_000095885.1 | hypothetical protein | VF |
| G9W35_RS24985 (G9W35_24875) | 99246..100541 | - | 1296 | WP_048961237.1 | type 4b pilus protein PilO2 | - |
| G9W35_RS24990 (G9W35_24880) | 100562..102181 | - | 1620 | WP_001035558.1 | Outer membrane lipoprotein BfpB | VF |
| G9W35_RS24995 (G9W35_24885) | 102213..102650 | - | 438 | WP_000539950.1 | hypothetical protein | VF |
| G9W35_RS25000 (G9W35_24890) | 102654..103724 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| G9W35_RS25005 (G9W35_24895) | 103965..104285 | - | 321 | WP_001447108.1 | hypothetical protein | - |
| G9W35_RS25010 (G9W35_24900) | 104401..104643 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| G9W35_RS25015 (G9W35_24905) | 104724..106418 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| G9W35_RS25020 (G9W35_24910) | 106445..107065 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| G9W35_RS25025 (G9W35_24915) | 107332..107994 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| G9W35_RS25030 (G9W35_24920) | 108135..108776 | - | 642 | WP_000335849.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|