MGE detailed information
MGE type: Prophage MGE length: 70051 bp
Accession: NZ_CP049845 Location: 4876570..4946620 Organism: Escherichia coli strain UPEC-245U/190328 Replicon: chromosome
Accession: NZ_CP049845 Location: 4876570..4946620 Organism: Escherichia coli strain UPEC-245U/190328 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9W35_RS23620 (4872485) | 4872485..4874683 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| G9W35_RS23625 (4874693) | 4874693..4875649 | + | 957 | WP_044687642.1 | molybdenum cofactor insertion chaperone PaoD | - |
| G9W35_RS23630 (4875700) | 4875700..4876038 | + | 339 | Protein_4624 | LysR substrate-binding domain-containing protein | - |
| G9W35_RS23635 (4876489) | 4876489..4876923 | + | 435 | Protein_4625 | IS3 family transposase ISEc48 | Transposase |
| G9W35_RS23640 (4876965) | 4876965..4877708 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| G9W35_RS23645 (4878533) | 4878533..4879306 | + | 774 | WP_001536784.1 | hypothetical protein | - |
| G9W35_RS23650 (4879367) | 4879367..4879921 | - | 555 | WP_001536786.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| G9W35_RS23655 (4879951) | 4879951..4880337 | + | 387 | WP_001537786.1 | hypothetical protein | - |
| G9W35_RS23660 (4880339) | 4880339..4880776 | + | 438 | WP_024207609.1 | tail fiber assembly protein | - |
| G9W35_RS23665 (4880748) | 4880748..4881143 | - | 396 | WP_000639074.1 | tail fiber assembly protein | - |
| G9W35_RS23670 (4881500) | 4881500..4881808 | - | 309 | Protein_4632 | protein StfP | - |
| G9W35_RS23675 (4881812) | 4881812..4882396 | - | 585 | WP_000383554.1 | YmfQ family protein | - |
| G9W35_RS23680 (4882387) | 4882387..4883445 | - | 1059 | WP_001536648.1 | baseplate J/gp47 family protein | - |
| G9W35_RS23685 (4883432) | 4883432..4883857 | - | 426 | WP_000424737.1 | phage GP46 family protein | - |
| G9W35_RS23690 (4883857) | 4883857..4884405 | - | 549 | WP_001259088.1 | phage baseplate assembly protein V | - |
| G9W35_RS23695 (4884405) | 4884405..4885484 | - | 1080 | WP_000999518.1 | baseplate protein | - |
| G9W35_RS23700 (4885481) | 4885481..4886809 | - | 1329 | WP_000219915.1 | DNA circularization N-terminal domain-containing protein | - |
| G9W35_RS23705 (4886871) | 4886871..4887401 | - | 531 | WP_000679481.1 | hypothetical protein | - |
| G9W35_RS23710 (4887493) | 4887493..4889325 | - | 1833 | WP_001542446.1 | phage tail tape measure protein | - |
| G9W35_RS23715 (4889467) | 4889467..4889736 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| G9W35_RS23720 (4889736) | 4889736..4890092 | - | 357 | WP_000090997.1 | phage tail tube protein | - |
| G9W35_RS23725 (4890092) | 4890092..4891588 | - | 1497 | WP_001764254.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| G9W35_RS23730 (4891572) | 4891572..4891742 | - | 171 | WP_000497753.1 | DUF2635 domain-containing protein | - |
| G9W35_RS23735 (4891751) | 4891751..4892311 | - | 561 | WP_001542455.1 | hypothetical protein | - |
| G9W35_RS23740 (4892308) | 4892308..4892814 | - | 507 | WP_001542444.1 | hypothetical protein | - |
| G9W35_RS23745 (4892789) | 4892789..4893199 | - | 411 | WP_057762772.1 | phage head closure protein | - |
| G9W35_RS23750 (4893196) | 4893196..4893519 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| G9W35_RS23755 (4893522) | 4893522..4893722 | - | 201 | WP_000601364.1 | hypothetical protein | - |
| G9W35_RS23760 (4893772) | 4893772..4894977 | - | 1206 | WP_000257506.1 | phage major capsid protein | - |
| G9W35_RS23765 (4894992) | 4894992..4895642 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| G9W35_RS23770 (4895620) | 4895620..4896861 | - | 1242 | WP_000466250.1 | phage portal protein | - |
| G9W35_RS23775 (4896861) | 4896861..4897043 | - | 183 | WP_000605605.1 | protein YmfR | - |
| G9W35_RS23780 (4897055) | 4897055..4898788 | - | 1734 | WP_000088153.1 | terminase large subunit | - |
| G9W35_RS23785 (4898785) | 4898785..4899279 | - | 495 | WP_000929184.1 | phage terminase small subunit P27 family | - |
| G9W35_RS23790 (4899405) | 4899405..4899755 | - | 351 | WP_001135203.1 | HNH endonuclease signature motif containing protein | - |
| G9W35_RS23795 (4899848) | 4899848..4900168 | - | 321 | WP_000651450.1 | hypothetical protein | - |
| G9W35_RS23800 (4900415) | 4900415..4900807 | - | 393 | WP_001476996.1 | DUF2570 domain-containing protein | - |
| G9W35_RS23805 (4900804) | 4900804..4901418 | - | 615 | WP_001075798.1 | glycoside hydrolase family 19 protein | - |
| G9W35_RS23810 (4901418) | 4901418..4901699 | - | 282 | WP_000422366.1 | phage holin family protein | - |
| G9W35_RS23815 (4901686) | 4901686..4902072 | - | 387 | WP_001283169.1 | phage holin family protein | - |
| G9W35_RS23820 (4902084) | 4902084..4902758 | - | 675 | WP_238020834.1 | hypothetical protein | - |
| G9W35_RS23825 (4902865) | 4902865..4903443 | - | 579 | WP_000609696.1 | DUF1133 family protein | - |
| G9W35_RS23830 (4903458) | 4903458..4904447 | - | 990 | WP_001471961.1 | DUF968 domain-containing protein | - |
| G9W35_RS23835 (4904455) | 4904455..4905264 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| G9W35_RS23840 (4905284) | 4905284..4905673 | - | 390 | WP_000767150.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G9W35_RS23845 (4905670) | 4905670..4905996 | - | 327 | WP_000210163.1 | LexA family transcriptional regulator | - |
| G9W35_RS23850 (4905996) | 4905996..4906490 | - | 495 | WP_077826244.1 | PerC family transcriptional regulator | - |
| G9W35_RS23855 (4906487) | 4906487..4907305 | - | 819 | WP_024207708.1 | helix-turn-helix domain-containing protein | - |
| G9W35_RS23860 (4907302) | 4907302..4907538 | - | 237 | WP_000933948.1 | hypothetical protein | - |
| G9W35_RS23865 (4907531) | 4907531..4908109 | - | 579 | WP_224691773.1 | ash family protein | - |
| G9W35_RS23870 (4908039) | 4908039..4908218 | - | 180 | WP_001542460.1 | DUF4222 domain-containing protein | - |
| G9W35_RS23875 (4908364) | 4908364..4908921 | - | 558 | WP_000515869.1 | protein YmfL | - |
| G9W35_RS23880 (4908965) | 4908965..4909165 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| G9W35_RS23885 (4909256) | 4909256..4909930 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| G9W35_RS23890 (4910165) | 4910165..4910371 | + | 207 | WP_000549623.1 | hypothetical protein | - |
| G9W35_RS23895 (4910343) | 4910343..4910777 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| G9W35_RS23900 (4910921) | 4910921..4911238 | + | 318 | Protein_4678 | hypothetical protein | - |
| G9W35_RS23905 (4911253) | 4911253..4911615 | + | 363 | WP_000135682.1 | protein YfdP | - |
| G9W35_RS23910 (4911681) | 4911681..4912505 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| G9W35_RS23915 (4912633) | 4912633..4913169 | + | 537 | WP_001538174.1 | 5'-deoxynucleotidase | - |
| G9W35_RS23920 (4913160) | 4913160..4913522 | + | 363 | WP_001242749.1 | phage protein | - |
| G9W35_RS23925 (4913522) | 4913522..4913827 | + | 306 | WP_000206732.1 | protein YfdT | - |
| G9W35_RS23930 (4913827) | 4913827..4914177 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| G9W35_RS23935 (4914099) | 4914099..4915217 | + | 1119 | WP_001132557.1 | hypothetical protein ; Integrase | Integrase |
| G9W35_RS23945 (4915422) | 4915422..4916675 | - | 1254 | WP_000893255.1 | glutamate-5-semialdehyde dehydrogenase | - |
| G9W35_RS23950 (4916687) | 4916687..4917790 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| G9W35_RS23955 (4918078) | 4918078..4919133 | + | 1056 | WP_000749865.1 | phosphoporin PhoE | - |
| G9W35_RS23960 (4919172) | 4919172..4919573 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (4920291) | 4920291..4920371 | - | 81 | NuclAT_10 | - | - |
| - (4920291) | 4920291..4920371 | - | 81 | NuclAT_10 | - | - |
| - (4920291) | 4920291..4920371 | - | 81 | NuclAT_10 | - | - |
| - (4920291) | 4920291..4920371 | - | 81 | NuclAT_10 | - | - |
| G9W35_RS23965 (4919631) | 4919631..4920875 | - | 1245 | WP_000189539.1 | esterase FrsA | - |
| G9W35_RS23970 (4920967) | 4920967..4921425 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| G9W35_RS23975 (4921686) | 4921686..4923143 | + | 1458 | WP_001293016.1 | cytosol nonspecific dipeptidase | - |
| G9W35_RS23980 (4923200) | 4923200..4923814 | - | 615 | WP_000602134.1 | peptide chain release factor H | - |
| G9W35_RS23985 (4923811) | 4923811..4924950 | - | 1140 | WP_000528870.1 | RNA ligase RtcB family protein | - |
| G9W35_RS23990 (4925196) | 4925196..4925648 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| G9W35_RS23995 (4925645) | 4925645..4926700 | - | 1056 | WP_001226182.1 | DNA polymerase IV | - |
| G9W35_RS24000 (4926771) | 4926771..4927556 | - | 786 | WP_000207568.1 | hypothetical protein | VF |
| G9W35_RS24005 (4927528) | 4927528..4929240 | + | 1713 | Protein_4698 | hypothetical protein | VF |
| G9W35_RS24010 (4929345) | 4929345..4929623 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| G9W35_RS24015 (4929616) | 4929616..4929972 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| G9W35_RS24020 (4930029) | 4930029..4930802 | - | 774 | WP_000543899.1 | hypothetical protein | VF |
| G9W35_RS24025 (4930988) | 4930988..4931248 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| G9W35_RS24030 (4931251) | 4931251..4931529 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| G9W35_RS24035 (4931685) | 4931685..4932425 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| G9W35_RS24040 (4932396) | 4932396..4933163 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| G9W35_RS24045 (4933369) | 4933369..4933947 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| G9W35_RS24050 (4934187) | 4934187..4936631 | + | 2445 | WP_000973081.1 | hypothetical protein | VF |
| G9W35_RS24055 (4936674) | 4936674..4937120 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| G9W35_RS24060 (4937301) | 4937301..4938068 | + | 768 | WP_001118037.1 | 2-oxoglutaramate amidase | - |
| G9W35_RS24065 (4938292) | 4938292..4939428 | - | 1137 | Protein_4710 | ISAs1 family transposase ISEc1 | Transposase |
| G9W35_RS24070 (4939689) | 4939689..4940138 | - | 450 | WP_000978828.1 | RHS element protein dsORF-h1 | - |
| G9W35_RS24075 (4940150) | 4940150..4944403 | - | 4254 | WP_021565397.1 | hypothetical protein | VF |
| G9W35_RS24080 (4944479) | 4944479..4946620 | - | 2142 | WP_000103319.1 | hypothetical protein | VF |
| G9W35_RS24085 (4946830) | 4946830..4947348 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| G9W35_RS24090 (4948045) | 4948045..4948545 | + | 501 | WP_000037395.1 | type VI secretion system contractile sheath small subunit | - |
| G9W35_RS24095 (4948580) | 4948580..4948804 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| G9W35_RS24100 (4948855) | 4948855..4950330 | + | 1476 | WP_074499969.1 | type VI secretion system contractile sheath large subunit | - |
| G9W35_RS24105 (4950337) | 4950337..4950750 | + | 414 | WP_000611742.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|