MGE detailed information
MGE type: Prophage MGE length: 135511 bp
Accession: NZ_CP049845 Location: 3373856..3509366 Organism: Escherichia coli strain UPEC-245U/190328 Replicon: chromosome
Accession: NZ_CP049845 Location: 3373856..3509366 Organism: Escherichia coli strain UPEC-245U/190328 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9W35_RS16240 (3369947) | 3369947..3370312 | + | 366 | WP_238020761.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| G9W35_RS16245 (3370299) | 3370299..3370628 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| G9W35_RS16250 (3370667) | 3370667..3371488 | - | 822 | WP_001260849.1 | serine protease | - |
| G9W35_RS16255 (3371588) | 3371588..3371671 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| G9W35_RS16260 (3371764) | 3371764..3372072 | - | 309 | WP_001342195.1 | acid resistance repetitive basic protein Asr | - |
| G9W35_RS16265 (3372496) | 3372496..3373749 | - | 1254 | WP_000091849.1 | MFS transporter | - |
| G9W35_RS16270 (3373856) | 3373856..3374749 | + | 894 | WP_001019530.1 | hypothetical protein | VF |
| G9W35_RS16275 (3374884) | 3374884..3376104 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| G9W35_RS16280 (3376229) | 3376229..3376924 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| G9W35_RS16285 (3376877) | 3376877..3378169 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| G9W35_RS16290 (3378328) | 3378328..3378942 | - | 615 | WP_074499873.1 | Tat proofreading chaperone DmsD | - |
| G9W35_RS16295 (3378985) | 3378985..3379839 | - | 855 | WP_000526490.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| G9W35_RS16300 (3379841) | 3379841..3380383 | - | 543 | Protein_3180 | dimethylsulfoxide reductase subunit B | - |
| G9W35_RS16305 (3380433) | 3380433..3381596 | - | 1164 | WP_001387389.1 | hypothetical protein ; Integrase | Integrase |
| G9W35_RS16310 (3381747) | 3381747..3381823 | - | 77 | Protein_3182 | DNA-binding protein | - |
| G9W35_RS16315 (3381858) | 3381858..3382109 | - | 252 | WP_000497817.1 | DUF4222 domain-containing protein | - |
| G9W35_RS16320 (3382158) | 3382158..3382838 | - | 681 | WP_016232087.1 | YqaJ viral recombinase family protein | - |
| G9W35_RS16325 (3382835) | 3382835..3383620 | - | 786 | WP_000100829.1 | phage recombination protein Bet | - |
| G9W35_RS16330 (3383626) | 3383626..3383922 | - | 297 | WP_238020762.1 | host-nuclease inhibitor Gam family protein | - |
| G9W35_RS16335 (3383919) | 3383919..3385991 | - | 2073 | WP_001271586.1 | exodeoxyribonuclease VIII | - |
| G9W35_RS16340 (3386099) | 3386099..3386485 | - | 387 | WP_021565214.1 | hypothetical protein | - |
| G9W35_RS16345 (3386569) | 3386569..3386790 | - | 222 | WP_000560214.1 | cell division protein FtsZ | - |
| G9W35_RS16350 (3387247) | 3387247..3387456 | + | 210 | WP_000189937.1 | hypothetical protein | - |
| G9W35_RS16355 (3387425) | 3387425..3387784 | - | 360 | WP_001005961.1 | hypothetical protein | - |
| G9W35_RS16360 (3387816) | 3387816..3388529 | - | 714 | WP_021565213.1 | hypothetical protein | - |
| G9W35_RS16365 (3388533) | 3388533..3388601 | - | 69 | Protein_3193 | regulator | - |
| G9W35_RS16370 (3389411) | 3389411..3390187 | - | 777 | WP_000528776.1 | DUF1828 domain-containing protein | - |
| G9W35_RS16375 (3390175) | 3390175..3390717 | - | 543 | WP_001074607.1 | hypothetical protein | - |
| G9W35_RS16380 (3390764) | 3390764..3391477 | - | 714 | WP_001274760.1 | LexA family transcriptional regulator | - |
| G9W35_RS16385 (3391578) | 3391578..3391778 | + | 201 | WP_000437871.1 | Cro/CI family transcriptional regulator | - |
| G9W35_RS16390 (3391917) | 3391917..3392213 | + | 297 | WP_000438525.1 | CII family transcriptional regulator | - |
| G9W35_RS16395 (3392228) | 3392228..3392446 | + | 219 | WP_000438870.1 | hypothetical protein | - |
| G9W35_RS16400 (3392467) | 3392467..3393549 | + | 1083 | WP_238020763.1 | DNA-binding protein | - |
| G9W35_RS16405 (3393556) | 3393556..3394296 | + | 741 | WP_021565210.1 | IS21 family transposase ISAzs30 | Transposase |
| G9W35_RS16410 (3394322) | 3394322..3395092 | + | 771 | WP_181047569.1 | DUF1627 domain-containing protein | - |
| G9W35_RS16415 (3395108) | 3395108..3395539 | + | 432 | WP_000196185.1 | DUF977 family protein | - |
| G9W35_RS16420 (3395572) | 3395572..3396246 | - | 675 | WP_032144013.1 | DUF4145 domain-containing protein | - |
| G9W35_RS16425 (3396245) | 3396245..3396490 | + | 246 | WP_000354247.1 | hypothetical protein | - |
| G9W35_RS16430 (3396545) | 3396545..3396853 | - | 309 | WP_000147082.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| G9W35_RS16435 (3396843) | 3396843..3397073 | - | 231 | WP_233010624.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G9W35_RS16440 (3397490) | 3397490..3398182 | + | 693 | WP_115726473.1 | ORF6N domain-containing protein | - |
| G9W35_RS16445 (3398237) | 3398237..3398647 | + | 411 | WP_042014379.1 | recombination protein NinB | - |
| G9W35_RS16450 (3398644) | 3398644..3398835 | + | 192 | WP_001254269.1 | NinE family protein | - |
| G9W35_RS16455 (3398859) | 3398859..3399149 | + | 291 | WP_024194163.1 | DUF1364 domain-containing protein | - |
| G9W35_RS16460 (3399146) | 3399146..3399508 | + | 363 | WP_181047570.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G9W35_RS16465 (3399505) | 3399505..3399705 | + | 201 | WP_000994506.1 | protein ninH | - |
| G9W35_RS16470 (3399698) | 3399698..3400078 | + | 381 | WP_032218107.1 | antiterminator Q family protein | - |
| G9W35_RS16475 (3400213) | 3400213..3400806 | + | 594 | WP_033808210.1 | hypothetical protein | - |
| G9W35_RS16480 (3401776) | 3401776..3401848 | - | 73 | Protein_3216 | hypothetical protein | - |
| G9W35_RS16485 (3402135) | 3402135..3404108 | + | 1974 | WP_000874521.1 | SASA family carbohydrate esterase | - |
| G9W35_RS16490 (3404250) | 3404250..3404444 | + | 195 | WP_024192660.1 | DUF1378 family protein | - |
| G9W35_RS16495 (3404470) | 3404470..3404760 | + | 291 | WP_000129681.1 | DUF826 domain-containing protein | - |
| G9W35_RS16500 (3404837) | 3404837..3405052 | + | 216 | WP_024194161.1 | class II holin family protein | - |
| G9W35_RS16505 (3405057) | 3405057..3405590 | + | 534 | WP_001539101.1 | lysozyme | - |
| G9W35_RS16510 (3405747) | 3405747..3405929 | + | 183 | WP_021566721.1 | hypothetical protein | - |
| G9W35_RS16515 (3405944) | 3405944..3406075 | + | 132 | WP_001280930.1 | hypothetical protein | - |
| G9W35_RS16520 (3406083) | 3406083..3406550 | + | 468 | WP_000092022.1 | lysis protein | - |
| G9W35_RS16525 (3406727) | 3406727..3407278 | + | 552 | WP_136753290.1 | Rha family transcriptional regulator | - |
| G9W35_RS16530 (3407578) | 3407578..3408384 | + | 807 | WP_001539097.1 | hypothetical protein | - |
| G9W35_RS16535 (3408365) | 3408365..3410071 | + | 1707 | WP_033811626.1 | terminase | - |
| G9W35_RS16540 (3410071) | 3410071..3412215 | + | 2145 | WP_238020765.1 | portal protein | - |
| G9W35_RS16545 (3412373) | 3412373..3413380 | + | 1008 | WP_000344999.1 | hypothetical protein | - |
| G9W35_RS16550 (3413403) | 3413403..3414617 | + | 1215 | WP_000214482.1 | N4-gp56 family major capsid protein | - |
| G9W35_RS16555 (3414672) | 3414672..3415064 | + | 393 | WP_001140438.1 | hypothetical protein | - |
| G9W35_RS16560 (3415115) | 3415115..3415576 | + | 462 | WP_001290750.1 | hypothetical protein | - |
| G9W35_RS16565 (3415560) | 3415560..3416123 | + | 564 | WP_000829400.1 | hypothetical protein | - |
| G9W35_RS16570 (3416123) | 3416123..3416773 | + | 651 | WP_000207911.1 | hypothetical protein | - |
| G9W35_RS16575 (3416770) | 3416770..3418647 | + | 1878 | WP_249756291.1 | ISNCY family transposase KIS | Transposase |
| G9W35_RS16580 (3418659) | 3418659..3419252 | + | 594 | WP_097747195.1 | DUF4376 domain-containing protein | - |
| G9W35_RS16585 (3420049) | 3420049..3421329 | + | 1281 | WP_126502592.1 | hypothetical protein | VF |
| G9W35_RS16590 (3421418) | 3421418..3421888 | + | 471 | WP_238020854.1 | hypothetical protein | - |
| G9W35_RS26190 (3421939) | 3421939..3422070 | + | 132 | WP_255397728.1 | hypothetical protein | - |
| G9W35_RS16595 (3422252) | 3422252..3423877 | + | 1626 | WP_097747140.1 | hypothetical protein | - |
| G9W35_RS16600 (3423874) | 3423874..3425142 | + | 1269 | WP_000162957.1 | DUF1983 domain-containing protein | - |
| G9W35_RS16605 (3425157) | 3425157..3425438 | + | 282 | WP_000852820.1 | hypothetical protein | - |
| G9W35_RS16610 (3425444) | 3425444..3426061 | + | 618 | WP_024185469.1 | hypothetical protein | - |
| G9W35_RS16615 (3426141) | 3426141..3426878 | + | 738 | WP_001539074.1 | hypothetical protein | VF |
| G9W35_RS16620 (3427111) | 3427111..3427251 | + | 141 | WP_000078907.1 | Hok/Gef family protein | - |
| G9W35_RS16625 (3427308) | 3427308..3427709 | + | 402 | WP_000035556.1 | hypothetical protein | - |
| G9W35_RS16630 (3427803) | 3427803..3428459 | + | 657 | WP_016232066.1 | hypothetical protein | - |
| G9W35_RS16635 (3428462) | 3428462..3428908 | + | 447 | WP_016232704.1 | hypothetical protein | - |
| G9W35_RS16640 (3428918) | 3428918..3429169 | + | 252 | WP_000540391.1 | bacteriocin | - |
| G9W35_RS16645 (3429180) | 3429180..3430442 | + | 1263 | WP_016232703.1 | hypothetical protein | - |
| G9W35_RS16650 (3430527) | 3430527..3438905 | + | 8379 | WP_238020855.1 | LPD5 domain-containing protein | - |
| G9W35_RS16655 (3439056) | 3439056..3439580 | + | 525 | WP_032270877.1 | Panacea domain-containing protein | - |
| G9W35_RS16660 (3439669) | 3439669..3440313 | - | 645 | WP_000528463.1 | ParB N-terminal domain-containing protein | - |
| G9W35_RS16665 (3440298) | 3440298..3441524 | - | 1227 | WP_001145450.1 | phosphoadenosine phosphosulfate reductase | - |
| G9W35_RS16670 (3441721) | 3441721..3442350 | - | 630 | WP_032218632.1 | antA/AntB antirepressor family protein | - |
| G9W35_RS16675 (3442618) | 3442618..3442884 | - | 267 | Protein_3256 | antA/AntB antirepressor family protein | - |
| G9W35_RS16680 (3443309) | 3443309..3443413 | - | 105 | Protein_3257 | 4Fe-4S binding protein | - |
| G9W35_RS16685 (3443424) | 3443424..3445847 | - | 2424 | WP_001342404.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| G9W35_RS16690 (3445908) | 3445908..3448334 | - | 2427 | WP_000041556.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| G9W35_RS16695 (3448533) | 3448533..3448838 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| G9W35_RS16700 (3448946) | 3448946..3449656 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| G9W35_RS16705 (3449659) | 3449659..3450219 | - | 561 | WP_074499876.1 | spermidine N1-acetyltransferase | - |
| G9W35_RS16710 (3450254) | 3450254..3450595 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| G9W35_RS16715 (3450730) | 3450730..3451056 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| G9W35_RS16720 (3451262) | 3451262..3452476 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| G9W35_RS16725 (3452488) | 3452488..3453507 | + | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| G9W35_RS16730 (3453695) | 3453695..3454975 | - | 1281 | WP_000877001.1 | hypothetical protein ; Integrase | Integrase |
| G9W35_RS16735 (3455010) | 3455010..3455261 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| G9W35_RS16740 (3455334) | 3455334..3457805 | - | 2472 | WP_033561585.1 | exonuclease | - |
| G9W35_RS16745 (3457899) | 3457899..3458090 | - | 192 | WP_001083273.1 | lysis protein YdfD | - |
| G9W35_RS16750 (3458087) | 3458087..3458278 | - | 192 | WP_238020856.1 | cell division inhibition protein DicB | - |
| G9W35_RS26195 (3458847) | 3458847..3458948 | - | 102 | Protein_3272 | protein YdfB | - |
| G9W35_RS16760 (3458950) | 3458950..3459105 | - | 156 | WP_032154077.1 | DUF1391 family protein | - |
| G9W35_RS16765 (3459403) | 3459403..3459822 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| G9W35_RS16770 (3459902) | 3459902..3460156 | + | 255 | WP_001072337.1 | hypothetical protein | - |
| G9W35_RS16775 (3460153) | 3460153..3460578 | + | 426 | WP_032285381.1 | toxin YdaT family protein | - |
| G9W35_RS16780 (3460650) | 3460650..3461720 | + | 1071 | WP_032285382.1 | phage replisome organizer | - |
| G9W35_RS16785 (3461761) | 3461761..3462177 | + | 417 | WP_032285383.1 | DUF977 family protein | - |
| G9W35_RS16790 (3462445) | 3462445..3463836 | - | 1392 | WP_000982358.1 | hypothetical protein | - |
| G9W35_RS16795 (3463926) | 3463926..3464834 | - | 909 | WP_001297700.1 | bacteriophage abortive infection AbiH family protein | - |
| G9W35_RS16800 (3465411) | 3465411..3465566 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G9W35_RS16805 (3466025) | 3466025..3466303 | + | 279 | WP_001429486.1 | hypothetical protein | - |
| G9W35_RS16810 (3466305) | 3466305..3467354 | + | 1050 | WP_001695976.1 | DUF968 domain-containing protein | - |
| G9W35_RS16815 (3467367) | 3467367..3467741 | + | 375 | WP_000904112.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G9W35_RS16820 (3467738) | 3467738..3468559 | + | 822 | WP_000762866.1 | antitermination protein | - |
| G9W35_RS16830 (3469323) | 3469323..3469409 | + | 87 | WP_000114358.1 | DUF3927 family protein | - |
| G9W35_RS16835 (3469503) | 3469503..3469634 | - | 132 | Protein_3287 | hypothetical protein | - |
| G9W35_RS16840 (3469944) | 3469944..3470204 | + | 261 | Protein_3288 | cell envelope integrity protein TolA | - |
| G9W35_RS16845 (3470376) | 3470376..3470750 | + | 375 | WP_001348108.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| G9W35_RS16850 (3471002) | 3471002..3471217 | + | 216 | WP_000839562.1 | phage lysis protein EssD | - |
| G9W35_RS16855 (3471222) | 3471222..3471533 | + | 312 | WP_000189918.1 | DUF1327 domain-containing protein | - |
| G9W35_RS16860 (3471530) | 3471530..3472063 | + | 534 | WP_001092966.1 | lysozyme | - |
| G9W35_RS16865 (3472060) | 3472060..3472227 | + | 168 | Protein_3293 | DUF2514 family protein | - |
| G9W35_RS16875 (3473537) | 3473537..3473818 | + | 282 | WP_238020889.1 | DUF2514 family protein | - |
| G9W35_RS16880 (3474182) | 3474182..3474394 | + | 213 | WP_001356335.1 | cold shock protein CspI | - |
| G9W35_RS16885 (3474405) | 3474405..3474593 | + | 189 | WP_071526745.1 | cold-shock protein | - |
| G9W35_RS16890 (3474596) | 3474596..3474634 | + | 39 | Protein_3298 | hypothetical protein | - |
| G9W35_RS16895 (3474666) | 3474666..3474896 | + | 231 | WP_000720960.1 | protein YnfN | - |
| G9W35_RS16900 (3475069) | 3475069..3475242 | + | 174 | WP_001019207.1 | addiction module toxin, GnsA/GnsB family | - |
| G9W35_RS16905 (3475538) | 3475538..3475744 | + | 207 | WP_000548593.1 | hypothetical protein | - |
| G9W35_RS16910 (3476307) | 3476307..3476834 | + | 528 | WP_001389340.1 | DUF1441 family protein | - |
| G9W35_RS16915 (3476843) | 3476843..3478942 | + | 2100 | WP_047340765.1 | phage terminase large subunit family protein | - |
| G9W35_RS16920 (3478939) | 3478939..3479151 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| G9W35_RS16925 (3479079) | 3479079..3480659 | + | 1581 | WP_077249459.1 | phage portal protein | - |
| G9W35_RS16930 (3480604) | 3480604..3482631 | + | 2028 | WP_001613113.1 | hypothetical protein | VF |
| G9W35_RS16935 (3482718) | 3482718..3483041 | + | 324 | WP_032285386.1 | DUF2190 family protein | - |
| G9W35_RS16940 (3483034) | 3483034..3483309 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| G9W35_RS16945 (3483321) | 3483321..3483899 | + | 579 | WP_074523820.1 | phage tail protein | - |
| G9W35_RS16950 (3483896) | 3483896..3484297 | + | 402 | WP_001079418.1 | phage minor tail U family protein | - |
| G9W35_RS16955 (3484309) | 3484309..3485052 | + | 744 | WP_000211103.1 | phage tail protein | - |
| G9W35_RS16960 (3485113) | 3485113..3485499 | + | 387 | WP_001297778.1 | phage minor tail protein G | - |
| G9W35_RS16965 (3485508) | 3485508..3485837 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| G9W35_RS16970 (3485809) | 3485809..3488874 | + | 3066 | WP_001613112.1 | phage tail tape measure protein | - |
| G9W35_RS16975 (3488874) | 3488874..3489203 | + | 330 | WP_000447248.1 | phage tail protein | - |
| G9W35_RS16980 (3489213) | 3489213..3489911 | + | 699 | WP_001724602.1 | phage minor tail protein L | - |
| G9W35_RS16985 (3489917) | 3489917..3490660 | + | 744 | WP_032236621.1 | C40 family peptidase | - |
| G9W35_RS16990 (3490597) | 3490597..3491199 | + | 603 | WP_000090847.1 | tail assembly protein | - |
| G9W35_RS16995 (3491260) | 3491260..3494739 | + | 3480 | WP_147697415.1 | host specificity protein J | - |
| G9W35_RS17000 (3494807) | 3494807..3495406 | + | 600 | WP_001233114.1 | hypothetical protein | VF |
| G9W35_RS17005 (3495471) | 3495471..3498869 | + | 3399 | WP_249756292.1 | prophage tail fiber N-terminal domain-containing protein | - |
| G9W35_RS17010 (3498869) | 3498869..3499450 | + | 582 | WP_001613101.1 | tail fiber assembly protein | - |
| G9W35_RS17015 (3500270) | 3500270..3500467 | - | 198 | WP_001421370.1 | hypothetical protein | - |
| G9W35_RS17020 (3501184) | 3501184..3502467 | + | 1284 | Protein_3324 | MHS family MFS transporter YdfJ | - |
| G9W35_RS17025 (3502556) | 3502556..3504016 | + | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| G9W35_RS17030 (3504052) | 3504052..3504255 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G9W35_RS17035 (3504433) | 3504433..3505119 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| G9W35_RS17040 (3505208) | 3505208..3505954 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| G9W35_RS17045 (3506091) | 3506091..3508136 | + | 2046 | WP_238020813.1 | peptidyl-dipeptidase Dcp | - |
| G9W35_RS17050 (3508180) | 3508180..3508698 | - | 519 | WP_001024809.1 | 2-oxo-tetronate isomerase | - |
| G9W35_RS17055 (3508974) | 3508974..3509366 | + | 393 | WP_000671744.1 | YdeI family stress tolerance OB fold protein | - |
| G9W35_RS17060 (3509621) | 3509621..3510511 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| G9W35_RS17065 (3510626) | 3510626..3510730 | - | 105 | WP_211180496.1 | protein MgtT | - |
| G9W35_RS17070 (3510730) | 3510730..3510825 | - | 96 | WP_000901367.1 | protein MgtS | - |
| G9W35_RS17075 (3510952) | 3510952..3512139 | - | 1188 | WP_074500393.1 | efflux MFS transporter YdeE | - |
| G9W35_RS17080 (3512334) | 3512334..3513233 | + | 900 | WP_021565119.1 | O-acetylserine/cysteine exporter | - |
| G9W35_RS17085 (3513278) | 3513278..3513976 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|