MGE detailed information
MGE type: Conjugative plasmid MGE length: 88163 bp
Accession: NZ_CP049844 Location: 1..88163 Organism: Escherichia coli strain UPEC-455U/190220 Replicon: plasmid pEcoUTI1d
Accession: NZ_CP049844 Location: 1..88163 Organism: Escherichia coli strain UPEC-455U/190220 Replicon: plasmid pEcoUTI1d
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9W36_RS24830 (2744) | 2744..3091 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| G9W36_RS24835 (3088) | 3088..3780 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| G9W36_RS24840 (3791) | 3791..4774 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| G9W36_RS24845 (4777) | 4777..6066 | + | 1290 | WP_042004726.1 | conjugal transfer protein TraO | - |
| G9W36_RS24850 (6066) | 6066..6770 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| G9W36_RS24855 (6770) | 6770..7297 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| G9W36_RS24860 (7348) | 7348..7752 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| G9W36_RS24865 (7816) | 7816..8004 | + | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| G9W36_RS24870 (7988) | 7988..8788 | + | 801 | WP_001164784.1 | IncI1-type conjugal transfer protein TraT | - |
| G9W36_RS24875 (8878) | 8878..11922 | + | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| G9W36_RS24880 (11922) | 11922..12536 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| G9W36_RS24885 (12503) | 12503..13705 | + | 1203 | WP_042004725.1 | IncI1-type conjugal transfer protein TraW | - |
| G9W36_RS24890 (13734) | 13734..14318 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| G9W36_RS24895 (14415) | 14415..16583 | + | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| G9W36_RS24900 (16657) | 16657..17307 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| G9W36_RS24905 (17379) | 17379..17588 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| G9W36_RS24910 (17980) | 17980..18156 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| G9W36_RS25590 (18221) | 18221..18453 | - | 233 | Protein_18 | hypothetical protein | - |
| G9W36_RS24915 (18815) | 18815..19066 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| G9W36_RS24920 (19138) | 19138..19290 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - (19345) | 19345..19402 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (19345) | 19345..19402 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (19345) | 19345..19402 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (19345) | 19345..19402 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (19643) | 19643..19698 | + | 56 | NuclAT_1 | - | - |
| - (19643) | 19643..19698 | + | 56 | NuclAT_1 | - | - |
| - (19643) | 19643..19698 | + | 56 | NuclAT_1 | - | - |
| - (19643) | 19643..19698 | + | 56 | NuclAT_1 | - | - |
| G9W36_RS24925 (19892) | 19892..20845 | + | 954 | WP_021513958.1 | hypothetical protein | - |
| G9W36_RS24930 (21063) | 21063..22271 | + | 1209 | WP_048257178.1 | IncI1-type conjugal transfer protein TrbA | - |
| G9W36_RS24935 (22290) | 22290..23360 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| G9W36_RS24940 (23353) | 23353..25644 | + | 2292 | WP_021520372.1 | F-type conjugative transfer protein TrbC | - |
| G9W36_RS24945 (25681) | 25681..28380 | - | 2700 | WP_219891834.1 | Protein TraI | Relaxase |
| G9W36_RS24950 (28391) | 28391..28723 | - | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| G9W36_RS24955 (28956) | 28956..29291 | + | 336 | WP_024227040.1 | hypothetical protein | - |
| G9W36_RS24960 (29377) | 29377..30225 | - | 849 | WP_024227041.1 | DUF4942 domain-containing protein | - |
| G9W36_RS24970 (30805) | 30805..31056 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| G9W36_RS24975 (31087) | 31087..31332 | - | 246 | WP_073853190.1 | hypothetical protein | - |
| G9W36_RS24980 (31332) | 31332..32246 | - | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| G9W36_RS24985 (32311) | 32311..32577 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| G9W36_RS24990 (32671) | 32671..33105 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| G9W36_RS24995 (33841) | 33841..34341 | - | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| G9W36_RS25000 (34804) | 34804..35400 | - | 597 | WP_024227064.1 | hypothetical protein | - |
| G9W36_RS25005 (35397) | 35397..36116 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| G9W36_RS25010 (36113) | 36113..36547 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| G9W36_RS25015 (36602) | 36602..38560 | - | 1959 | WP_042004724.1 | ParB/RepB/Spo0J family partition protein | - |
| G9W36_RS25020 (38619) | 38619..38852 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| G9W36_RS25025 (38855) | 38855..39442 | - | 588 | Protein_40 | single-stranded DNA-binding protein | - |
| G9W36_RS25035 (40214) | 40214..40405 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| G9W36_RS25040 (40402) | 40402..40824 | - | 423 | WP_219891835.1 | DUF1380 domain-containing protein | - |
| G9W36_RS25045 (40871) | 40871..41296 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| G9W36_RS25050 (41715) | 41715..42485 | - | 771 | WP_219891836.1 | hypothetical protein | - |
| G9W36_RS25055 (42530) | 42530..42997 | - | 468 | WP_223230041.1 | DUF1380 family protein | - |
| G9W36_RS25060 (42978) | 42978..43199 | - | 222 | WP_219891837.1 | hypothetical protein | - |
| G9W36_RS25065 (43200) | 43200..43883 | - | 684 | WP_219891838.1 | DNA methylase | - |
| G9W36_RS25070 (43960) | 43960..44271 | - | 312 | WP_219891839.1 | hypothetical protein | - |
| G9W36_RS25075 (44268) | 44268..45170 | - | 903 | WP_219891840.1 | DUF1281 domain-containing protein | - |
| G9W36_RS25080 (45588) | 45588..45836 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| G9W36_RS25085 (45833) | 45833..46270 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| G9W36_RS25090 (46270) | 46270..47548 | + | 1279 | Protein_52 | translesion error-prone DNA polymerase V subunit UmuC | - |
| G9W36_RS25095 (47550) | 47550..47966 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| G9W36_RS25100 (47959) | 47959..48939 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| G9W36_RS25105 (49353) | 49353..49661 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| G9W36_RS25110 (49748) | 49748..50392 | - | 645 | WP_001144036.1 | ParA family protein | - |
| G9W36_RS25115 (50572) | 50572..51351 | - | 780 | WP_219891841.1 | site-specific integrase | - |
| G9W36_RS25120 (51353) | 51353..51766 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| G9W36_RS25125 (52335) | 52335..52592 | + | 258 | WP_219891830.1 | hypothetical protein | - |
| G9W36_RS25130 (52592) | 52592..53182 | + | 591 | WP_219891831.1 | hypothetical protein | - |
| G9W36_RS25135 (53202) | 53202..53549 | - | 348 | WP_219891832.1 | DUF6404 family protein | - |
| G9W36_RS25595 (53804) | 53804..54013 | + | 210 | WP_250146858.1 | colicin E1 immunity protein | - |
| G9W36_RS25145 (54084) | 54084..55925 | - | 1842 | WP_219891833.1 | colicin Ia central receptor-binding domain-containing protein | - |
| G9W36_RS25150 (56204) | 56204..57550 | - | 1347 | WP_001132033.1 | protein YagA | - |
| G9W36_RS25155 (57904) | 57904..58506 | + | 603 | WP_048257190.1 | ProQ/FINO family protein | - |
| G9W36_RS25160 (58562) | 58562..59071 | + | 510 | WP_000045394.1 | hypothetical protein | - |
| G9W36_RS25165 (60140) | 60140..61171 | - | 1032 | WP_048257187.1 | plasmid replication initiator RepA | - |
| G9W36_RS25600 (62129) | 62129..62287 | + | 159 | Protein_68 | ash family protein | - |
| G9W36_RS25175 (62325) | 62325..62612 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| G9W36_RS25180 (63054) | 63054..63587 | + | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| G9W36_RS25185 (63841) | 63841..64524 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| G9W36_RS25190 (64697) | 64697..65248 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| G9W36_RS25195 (65410) | 65410..65664 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| G9W36_RS25200 (65831) | 65831..66127 | + | 297 | WP_050571830.1 | hypothetical protein | - |
| G9W36_RS25205 (66751) | 66751..67818 | + | 1068 | WP_012783947.1 | hypothetical protein | VF |
| G9W36_RS25210 (67818) | 67818..68255 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| G9W36_RS25215 (68269) | 68269..69951 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| G9W36_RS25220 (69944) | 69944..71239 | + | 1296 | WP_001388364.1 | type 4b pilus protein PilO2 | - |
| G9W36_RS25225 (71226) | 71226..71678 | + | 453 | WP_001247870.1 | hypothetical protein | VF |
| G9W36_RS25230 (71689) | 71689..73242 | + | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| G9W36_RS25235 (73255) | 73255..74352 | + | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| G9W36_RS25240 (74370) | 74370..74984 | + | 615 | WP_048257183.1 | hypothetical protein | VF |
| G9W36_RS25245 (74994) | 74994..75554 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| G9W36_RS25250 (75539) | 75539..76195 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| G9W36_RS25255 (76195) | 76195..77632 | + | 1438 | Protein_85 | hypothetical protein | VF |
| G9W36_RS25605 (78462) | 78462..78692 | - | 231 | Protein_86 | hypothetical protein | - |
| G9W36_RS25265 (79292) | 79292..80446 | + | 1155 | WP_001139955.1 | site-specific integrase | - |
| G9W36_RS25270 (80597) | 80597..81421 | + | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| G9W36_RS25275 (81507) | 81507..82709 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| G9W36_RS25280 (82769) | 82769..83353 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| G9W36_RS25285 (83747) | 83747..84205 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| G9W36_RS25290 (84202) | 84202..85020 | + | 819 | WP_000646098.1 | hypothetical protein | VF |
| G9W36_RS25295 (85017) | 85017..86165 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| G9W36_RS25300 (86162) | 86162..86452 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| G9W36_RS25305 (86467) | 86467..87018 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|