MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 69888 bp
Accession: NZ_CP049703 Location: 618597..688484 Organism: Parageobacillus toebii NBRC 107807 strain DSM 14590 Replicon: chromosome
Accession: NZ_CP049703 Location: 618597..688484 Organism: Parageobacillus toebii NBRC 107807 strain DSM 14590 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DER53_RS03235 () | 614111..614977 | - | 867 | WP_062756107.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| DER53_RS03240 () | 614981..616054 | - | 1074 | WP_062756106.1 | glycosyltransferase | - |
| DER53_RS03245 () | 616051..617163 | - | 1113 | WP_062756104.1 | glycosyltransferase | - |
| DER53_RS03250 () | 617174..618550 | - | 1377 | WP_062756102.1 | oligosaccharide repeat unit polymerase | - |
| DER53_RS03255 () | 618563..619621 | - | 1059 | WP_062756100.1 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) | - |
| DER53_RS03260 () | 619685..621127 | - | 1443 | WP_062756098.1 | oligosaccharide flippase family protein | - |
| DER53_RS03265 () | 621129..621860 | - | 732 | WP_062756096.1 | UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase | VF |
| DER53_RS03270 () | 621886..623199 | - | 1314 | WP_062756094.1 | UDP-N-acetyl-D-glucosamine 6-dehydrogenase | VF |
| DER53_RS03275 () | 623218..624231 | - | 1014 | WP_062756092.1 | Myo-inositol 2-dehydrogenase | VF |
| DER53_RS03280 () | 624224..624955 | - | 732 | WP_121910015.1 | lipopolysaccharide biosynthesis protein | - |
| DER53_RS03285 () | 625087..626199 | - | 1113 | WP_062756091.1 | dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase | VF |
| DER53_RS03290 () | 626442..627524 | - | 1083 | WP_062756089.1 | putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase | VF |
| DER53_RS03295 () | 627773..630143 | + | 2371 | Protein_632 | accessory Sec system translocase SecA2 | - |
| DER53_RS03300 () | 630160..631041 | + | 882 | WP_062756085.1 | accessory Sec system S-layer assembly protein | - |
| DER53_RS03305 () | 631167..632573 | - | 1407 | WP_121910016.1 | Carboxy-terminal processing protease CtpB | VF |
| DER53_RS03310 () | 632587..633327 | - | 741 | WP_062756083.1 | hypothetical protein | - |
| DER53_RS03315 () | 633543..634433 | + | 891 | WP_011886641.1 | ISNCY family transposase ISBth18 | Transposase |
| DER53_RS03320 () | 634965..635201 | - | 237 | Protein_637 | hypothetical protein | - |
| DER53_RS03325 () | 636165..637586 | - | 1422 | WP_062756494.1 | hypothetical protein | - |
| DER53_RS03330 () | 638575..640683 | - | 2109 | WP_062756496.1 | Putative endo-beta-N-acetylglucosaminidase | VF |
| DER53_RS03335 () | 641102..642106 | - | 1005 | WP_121910071.1 | CapA family protein | - |
| DER53_RS03340 () | 643259..644449 | + | 1191 | WP_121910017.1 | ISL3 family transposase ISMae36 | Transposase |
| DER53_RS03345 () | 644768..645154 | - | 387 | WP_062755465.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| DER53_RS03350 () | 645154..645462 | - | 309 | WP_062755467.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DER53_RS03355 () | 646125..646301 | - | 177 | WP_156482448.1 | hypothetical protein | - |
| DER53_RS03360 () | 646677..646957 | - | 281 | Protein_645 | helix-turn-helix transcriptional regulator | - |
| DER53_RS03370 () | 647296..648192 | - | 897 | WP_062755470.1 | hypothetical protein | - |
| DER53_RS03375 () | 648189..648983 | - | 795 | WP_050367864.1 | ImmA/IrrE family metallo-endopeptidase | - |
| DER53_RS03380 () | 648967..649380 | - | 414 | WP_062755473.1 | hypothetical protein | - |
| DER53_RS03385 () | 649756..649908 | - | 153 | Protein_649 | site-specific integrase | - |
| DER53_RS03390 () | 650120..651097 | + | 978 | WP_082805436.1 | copper amine oxidase N-terminal domain-containing protein | - |
| DER53_RS03395 () | 651594..651887 | - | 294 | WP_062755478.1 | hypothetical protein | - |
| DER53_RS03400 () | 651900..652343 | - | 444 | WP_062755479.1 | LAGLIDADG family homing endonuclease | - |
| DER53_RS03405 () | 652483..652812 | - | 330 | WP_062755481.1 | hypothetical protein | - |
| DER53_RS03410 () | 653039..653946 | - | 908 | Protein_654 | Tn3 family transposase TnBth2 | Transposase |
| DER53_RS03415 () | 654188..654946 | - | 759 | WP_062755483.1 | hypothetical protein | - |
| DER53_RS03420 () | 654979..655839 | - | 861 | WP_167317819.1 | IS91 family transposase ISWz1 | Transposase |
| DER53_RS03425 () | 656172..656384 | - | 213 | WP_062755487.1 | helix-turn-helix transcriptional regulator | - |
| DER53_RS03430 () | 656490..656882 | + | 393 | WP_062755488.1 | transcriptional regulator | - |
| DER53_RS03435 () | 657175..657636 | - | 462 | WP_062755490.1 | hypothetical protein | - |
| DER53_RS03440 () | 658126..659355 | + | 1230 | WP_062755492.1 | replication-relaxation family protein | - |
| DER53_RS03445 () | 659870..661351 | + | 1482 | WP_121910018.1 | DUF3987 domain-containing protein | - |
| DER53_RS03450 () | 661383..661655 | + | 273 | WP_121910019.1 | hypothetical protein | - |
| DER53_RS03455 () | 661652..662071 | + | 420 | WP_062755499.1 | hypothetical protein | - |
| DER53_RS03460 () | 663504..663737 | - | 234 | WP_062755503.1 | hypothetical protein | - |
| DER53_RS03465 () | 663930..664169 | - | 240 | WP_062755505.1 | hypothetical protein | - |
| DER53_RS03470 () | 664477..664665 | + | 189 | WP_062755507.1 | hypothetical protein | - |
| DER53_RS03475 () | 665017..665322 | - | 306 | WP_062755510.1 | hypothetical protein | - |
| DER53_RS03480 () | 665881..666471 | + | 591 | WP_062755512.1 | hypothetical protein | - |
| DER53_RS03485 () | 666932..667654 | - | 723 | WP_062755514.1 | CPBP family intramembrane metalloprotease | - |
| DER53_RS03490 () | 668410..670377 | - | 1968 | WP_121910021.1 | pre-peptidase C-terminal domain-containing protein | - |
| DER53_RS03495 () | 670728..672767 | - | 2040 | WP_062755518.1 | hypothetical protein | - |
| DER53_RS03500 () | 672981..673787 | + | 807 | WP_062755522.1 | hypothetical protein | - |
| DER53_RS03505 () | 674101..674388 | - | 288 | WP_062755524.1 | hypothetical protein | - |
| DER53_RS03510 () | 674895..676580 | + | 1686 | WP_062755526.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| DER53_RS03515 () | 676644..677483 | + | 840 | WP_062755528.1 | helix-turn-helix domain-containing protein | - |
| DER53_RS03520 () | 677559..678449 | + | 891 | WP_062755530.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DER53_RS03525 () | 678887..680986 | + | 2100 | WP_062755534.1 | hypothetical protein | - |
| DER53_RS03530 () | 680983..681321 | + | 339 | WP_062755536.1 | hypothetical protein | - |
| DER53_RS03535 () | 681384..681638 | - | 255 | WP_147442416.1 | hypothetical protein | - |
| DER53_RS03540 () | 681746..682021 | - | 276 | WP_062755539.1 | helix-turn-helix domain-containing protein | - |
| DER53_RS03545 () | 682096..682281 | - | 186 | WP_062755541.1 | hypothetical protein | - |
| DER53_RS03550 () | 682851..685616 | - | 2766 | WP_062755543.1 | hypothetical protein | - |
| DER53_RS03555 () | 686064..686846 | - | 783 | WP_062755547.1 | SLAP domain-containing protein | - |
| DER53_RS03560 () | 687191..688558 | - | 1368 | WP_174525705.1 | peptidoglycan-binding protein | - |
| DER53_RS03565 () | 689081..689581 | - | 501 | WP_062755549.1 | hypothetical protein | - |
| DER53_RS03570 () | 689799..690206 | + | 408 | WP_171698742.1 | helix-turn-helix domain-containing protein | - |
| DER53_RS03575 () | 690380..690724 | - | 345 | WP_015865176.1 | single-stranded DNA-binding protein | - |
| DER53_RS03580 () | 691059..691505 | + | 447 | WP_015865177.1 | YwpF-like family protein | - |
| DER53_RS03585 () | 691516..692118 | - | 603 | WP_062755553.1 | class D sortase | - |
| DER53_RS03590 () | 692124..693089 | - | 966 | WP_062755555.1 | processed acidic surface protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|