MGE detailed information
MGE type: IScluster/Tn MGE length: 15428 bp
Accession: NZ_CP049606 Location: 2613844..2629271 Organism: Shigella boydii strain 600080 Replicon: chromosome
Accession: NZ_CP049606 Location: 2613844..2629271 Organism: Shigella boydii strain 600080 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S61_RS13340 () | 2610191..2610460 | - | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| G5S61_RS13345 () | 2610517..2611185 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| G5S61_RS13350 () | 2611501..2613144 | + | 1644 | WP_178986842.1 | NEL-type E3 ubiquitin ligase domain-containing protein | - |
| G5S61_RS13355 () | 2613324..2613800 | - | 477 | Protein_2647 | DUF4376 domain-containing protein | - |
| G5S61_RS13365 () | 2615061..2615867 | - | 807 | Protein_2649 | transposase | - |
| G5S61_RS13370 () | 2615864..2616214 | - | 351 | WP_005049241.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| G5S61_RS13375 () | 2616211..2616885 | - | 675 | WP_039065696.1 | IS66-like element accessory protein TnpA | - |
| G5S61_RS13380 () | 2616984..2617199 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| G5S61_RS13405 () | 2617995..2618683 | - | 689 | Protein_2653 | bacteriophage antitermination protein Q | - |
| G5S61_RS13410 () | 2618680..2619045 | - | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G5S61_RS13415 () | 2619046..2620104 | - | 1059 | WP_039066246.1 | DUF968 domain-containing protein | - |
| G5S61_RS13420 () | 2620106..2620384 | - | 279 | WP_011069426.1 | hypothetical protein | - |
| G5S61_RS13430 () | 2620552..2620707 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2620719..2620777 | + | 59 | - | - | Antitoxin Detail |
| G5S61_RS13435 () | 2621359..2621643 | - | 285 | Protein_2658 | hypothetical protein | - |
| G5S61_RS23720 () | 2622255..2622443 | + | 189 | WP_260479634.1 | hypothetical protein | - |
| G5S61_RS13445 () | 2622389..2622565 | + | 177 | WP_039066248.1 | DUF4224 domain-containing protein | - |
| G5S61_RS13450 () | 2622565..2623605 | + | 1041 | WP_005096324.1 | tyrosine-type recombinase/integrase | - |
| G5S61_RS13460 () | 2623816..2624613 | + | 798 | WP_039066256.1 | DgsA anti-repressor MtfA | - |
| G5S61_RS13470 () | 2624951..2626213 | + | 1263 | Protein_2664 | tyrosine-type recombinase/integrase | - |
| G5S61_RS13480 () | 2627544..2628050 | + | 507 | Protein_2666 | MFS transporter | - |
| G5S61_RS13485 () | 2628115..2629314 | + | 1200 | Protein_2667 | IS3 family transposase | - |
| G5S61_RS13490 () | 2629315..2629521 | + | 207 | WP_000466572.1 | hypothetical protein | - |
| G5S61_RS13495 () | 2629623..2631077 | + | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| G5S61_RS13500 () | 2631420..2632136 | + | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|