MGE detailed information
MGE type: Genomic_island MGE length: 9356 bp
Accession: NZ_CP049353 Location: 4138365..4147720 Organism: Escherichia coli strain T28R Replicon: chromosome
Accession: NZ_CP049353 Location: 4138365..4147720 Organism: Escherichia coli strain T28R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G7B60_RS20020 () | 4134166..4134504 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| G7B60_RS20025 () | 4134480..4136177 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| G7B60_RS20030 () | 4136214..4136789 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| G7B60_RS20040 () | 4137375..4138072 | + | 698 | Protein_3909 | IS1-like element IS1A family transposase | - |
| G7B60_RS20045 () | 4138365..4139903 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| G7B60_RS20050 () | 4140268..4141602 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| G7B60_RS20055 () | 4141682..4143829 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| G7B60_RS20060 () | 4143888..4145345 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| G7B60_RS20065 () | 4145582..4147099 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| G7B60_RS20070 () | 4147223..4147396 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| G7B60_RS20075 () | 4147424..4147720 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| G7B60_RS20080 () | 4147947..4148219 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| G7B60_RS20085 () | 4148231..4148461 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| G7B60_RS20090 () | 4148642..4150273 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| G7B60_RS20095 () | 4150270..4150989 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.002 |