MGE detailed information
MGE type: Prophage MGE length: 63526 bp
Accession: NZ_CP049353 Location: 3606573..3670098 Organism: Escherichia coli strain T28R Replicon: chromosome
Accession: NZ_CP049353 Location: 3606573..3670098 Organism: Escherichia coli strain T28R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G7B60_RS17405 () | 3603314..3604270 | + | 957 | WP_001752149.1 | molybdenum cofactor insertion chaperone PaoD | - |
| G7B60_RS17410 () | 3604321..3604659 | + | 339 | Protein_3400 | LysR family transcriptional regulator | - |
| G7B60_RS17415 () | 3605217..3606290 | - | 1074 | WP_198068590.1 | hypothetical protein | - |
| G7B60_RS17420 () | 3606573..3608906 | - | 2334 | WP_152927292.1 | toprim domain-containing protein | - |
| G7B60_RS17425 () | 3608918..3609238 | - | 321 | WP_014837515.1 | DUF5375 domain-containing protein | - |
| G7B60_RS17430 () | 3609235..3609462 | - | 228 | WP_004152205.1 | hypothetical protein | - |
| G7B60_RS17435 () | 3609459..3610010 | - | 552 | WP_114265317.1 | host cell division inhibitor Icd-like protein | - |
| G7B60_RS17440 () | 3610007..3610273 | - | 267 | WP_015585920.1 | AlpA family transcriptional regulator | - |
| G7B60_RS17445 () | 3610813..3611550 | + | 738 | WP_114265318.1 | glycoprotein 3 | - |
| G7B60_RS17450 () | 3611547..3611792 | + | 246 | WP_004136116.1 | ogr/Delta-like zinc finger family protein | - |
| G7B60_RS17455 () | 3611810..3612376 | + | 567 | WP_152927291.1 | Polarity suppression protein | - |
| G7B60_RS17465 () | 3612907..3613560 | - | 654 | WP_048981219.1 | HNH endonuclease | - |
| G7B60_RS17470 () | 3613553..3614800 | - | 1248 | WP_048981221.1 | ATP-binding protein | - |
| G7B60_RS17475 () | 3614801..3615979 | - | 1179 | WP_064178924.1 | Prophage integrase IntS ; Integrase | Integrase |
| G7B60_RS17485 () | 3616280..3617353 | + | 1074 | WP_024046444.1 | hypothetical protein ; Integrase | Integrase |
| G7B60_RS17490 () | 3617371..3618768 | + | 1398 | WP_024046445.1 | phage tail tape measure protein | - |
| G7B60_RS17495 () | 3618998..3619210 | - | 213 | WP_024046447.1 | hypothetical protein | - |
| G7B60_RS17500 () | 3619280..3620674 | - | 1395 | WP_024046448.1 | P-type conjugative transfer protein TrbL | - |
| G7B60_RS17505 () | 3620677..3620850 | - | 174 | WP_001575473.1 | hypothetical protein | - |
| G7B60_RS17510 () | 3620862..3621656 | - | 795 | WP_024046449.1 | P-type conjugative transfer protein TrbJ | - |
| G7B60_RS17515 () | 3621738..3622091 | - | 354 | WP_024046450.1 | conjugal transfer transcriptional regulator TraJ | - |
| G7B60_RS17520 () | 3622373..3622654 | - | 282 | WP_000843928.1 | hypothetical protein | - |
| G7B60_RS17525 () | 3623360..3623617 | + | 258 | WP_024046451.1 | HigA family addiction module antidote protein | - |
| G7B60_RS17530 () | 3623677..3624374 | - | 698 | Protein_3422 | IS1 family transposase IS1G | Transposase |
| G7B60_RS17535 () | 3624876..3625976 | - | 1101 | WP_024046452.1 | hypothetical protein | - |
| G7B60_RS17540 () | 3626375..3626977 | + | 603 | WP_024046453.1 | IS91 family transposase ISMno24 | Transposase |
| G7B60_RS17545 () | 3627140..3627721 | + | 582 | WP_072645592.1 | DUF4145 domain-containing protein | - |
| G7B60_RS17550 () | 3627796..3629202 | - | 1407 | WP_021570688.1 | hypothetical protein | - |
| G7B60_RS17560 () | 3630110..3631363 | - | 1254 | WP_000893279.1 | glutamate-5-semialdehyde dehydrogenase | - |
| G7B60_RS17565 () | 3631375..3632478 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| G7B60_RS17570 () | 3632766..3633821 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| G7B60_RS17575 () | 3633860..3634261 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| G7B60_RS17580 () | 3634319..3635563 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3634979..3635059 | - | 81 | NuclAT_8 | - | - |
| - () | 3634979..3635059 | - | 81 | NuclAT_8 | - | - |
| - () | 3634979..3635059 | - | 81 | NuclAT_8 | - | - |
| - () | 3634979..3635059 | - | 81 | NuclAT_8 | - | - |
| G7B60_RS17585 () | 3635655..3636113 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| G7B60_RS17590 () | 3636374..3637831 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| G7B60_RS17595 () | 3637888..3638409 | - | 522 | Protein_3434 | peptide chain release factor H | - |
| G7B60_RS17600 () | 3638408..3638611 | - | 204 | Protein_3435 | RNA ligase RtcB family protein | - |
| G7B60_RS17605 () | 3638869..3639566 | - | 698 | Protein_3436 | IS1 family transposase IS1S | Transposase |
| G7B60_RS17610 () | 3639621..3639911 | - | 291 | Protein_3437 | GNAT family N-acetyltransferase | - |
| G7B60_RS17615 () | 3639921..3640319 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| G7B60_RS17620 () | 3640322..3640615 | - | 294 | WP_152927302.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| G7B60_RS17625 () | 3640667..3641722 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| G7B60_RS17630 () | 3641793..3642578 | - | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| G7B60_RS17635 () | 3642550..3644262 | + | 1713 | Protein_3442 | Flagellar biosynthesis protein FlhA | VF |
| G7B60_RS17640 () | 3644486..3644983 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| G7B60_RS17645 () | 3645159..3645932 | - | 774 | WP_001355630.1 | Murein DD-endopeptidase MepH | VF |
| G7B60_RS17650 () | 3646118..3646378 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| G7B60_RS17655 () | 3646381..3646650 | + | 270 | Protein_3446 | type II toxin-antitoxin system YafQ family toxin | - |
| G7B60_RS17660 () | 3646806..3647546 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| G7B60_RS17665 () | 3647517..3648284 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| G7B60_RS17670 () | 3648490..3649068 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| G7B60_RS17675 () | 3649308..3651752 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| G7B60_RS17680 () | 3651795..3652241 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| G7B60_RS17685 () | 3652422..3653192 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| G7B60_RS17690 () | 3653233..3653619 | - | 387 | Protein_3453 | ISAs1 family transposase ISEc1 | Transposase |
| G7B60_RS17695 () | 3653677..3654374 | + | 698 | Protein_3454 | IS1 family transposase IS1R | Transposase |
| G7B60_RS17705 () | 3654915..3655646 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| G7B60_RS17710 () | 3655711..3656178 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| G7B60_RS17715 () | 3656175..3656897 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| G7B60_RS17720 () | 3656931..3657686 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| G7B60_RS17725 () | 3657758..3659116 | + | 1359 | WP_000644685.1 | Membrane-bound lytic murein transglycosylase D | VF |
| G7B60_RS17730 () | 3659164..3659760 | - | 597 | Protein_3460 | methyltransferase domain-containing protein | - |
| G7B60_RS17735 () | 3659791..3660591 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| G7B60_RS17740 () | 3660832..3661746 | + | 915 | WP_000648572.1 | HTH-type transcriptional regulator DmlR | VF |
| G7B60_RS17745 () | 3661743..3662546 | - | 804 | WP_152927305.1 | 2,5-didehydrogluconate reductase DkgB | - |
| G7B60_RS17780 () | 3668304..3668879 | - | 576 | WP_001140187.1 | D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase | VF |
| G7B60_RS17785 () | 3669067..3670098 | + | 1032 | WP_000594006.1 | Methionine import ATP-binding protein MetN | VF |
| G7B60_RS17790 () | 3670091..3670744 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| G7B60_RS17795 () | 3670784..3671599 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| G7B60_RS17800 () | 3671717..3672121 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| G7B60_RS17805 () | 3672118..3672825 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| G7B60_RS17810 () | 3672937..3674655 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|