MGE detailed information
MGE type: Conjugative plasmid MGE length: 94989 bp
Accession: NZ_CP049350 Location: 1..94989 Organism: Escherichia coli strain 3R Replicon: plasmid p3R-2
Accession: NZ_CP049350 Location: 1..94989 Organism: Escherichia coli strain 3R Replicon: plasmid p3R-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6Q95_RS24100 () | 123..647 | + | 525 | Protein_1 | conjugal transfer protein TraQ | - |
| G6Q95_RS24105 () | 698..1099 | + | 402 | WP_164994193.1 | IncI1-type conjugal transfer protein TraR | - |
| G6Q95_RS24110 () | 1160..1348 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| G6Q95_RS24115 () | 1332..2129 | + | 798 | WP_164994194.1 | IncI1-type conjugal transfer protein TraT | - |
| G6Q95_RS24120 () | 2223..5266 | + | 3044 | Protein_5 | hypothetical protein | VF |
| G6Q95_RS24125 () | 5266..5879 | + | 614 | Protein_6 | IncI1-type conjugal transfer protein TraV | - |
| G6Q95_RS24130 () | 5846..7048 | + | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| G6Q95_RS24135 () | 7077..7661 | + | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| G6Q95_RS24140 () | 7758..9925 | + | 2168 | Protein_9 | DotA/TraY family protein | - |
| G6Q95_RS24145 () | 9996..10658 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| G6Q95_RS24150 () | 10730..10939 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| G6Q95_RS24155 () | 11331..11507 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - () | 11993..12044 | + | 52 | NuclAT_1 | - | - |
| - () | 11993..12044 | + | 52 | NuclAT_1 | - | - |
| - () | 11993..12044 | + | 52 | NuclAT_1 | - | - |
| - () | 11993..12044 | + | 52 | NuclAT_1 | - | - |
| G6Q95_RS24160 () | 12228..13250 | + | 1023 | WP_001572805.1 | IS21 family transposase IS100kyp | Transposase |
| G6Q95_RS24165 () | 13247..14029 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| G6Q95_RS24170 () | 14390..14641 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| G6Q95_RS24175 () | 14713..14865 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 14915..14977 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 14915..14977 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 14915..14977 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 14915..14977 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| G6Q95_RS24180 () | 15157..16365 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| G6Q95_RS24185 () | 16384..17454 | + | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| G6Q95_RS24190 () | 17447..19738 | + | 2292 | WP_001289271.1 | hypothetical protein | - |
| G6Q95_RS24195 () | 19775..22474 | - | 2700 | WP_001474686.1 | Protein TraI | Relaxase |
| G6Q95_RS24200 () | 22485..22817 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| G6Q95_RS24205 () | 23051..23386 | + | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| G6Q95_RS24210 () | 23472..24320 | - | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| G6Q95_RS24215 () | 24901..25152 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| G6Q95_RS24220 () | 25183..25476 | - | 294 | WP_077250487.1 | hypothetical protein | VF |
| G6Q95_RS24225 () | 25476..26378 | - | 903 | WP_000038404.1 | Recombination-promoting nuclease RpnA | VF |
| G6Q95_RS24230 () | 26443..26709 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| G6Q95_RS24235 () | 26803..27237 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| G6Q95_RS24240 () | 27966..28466 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| G6Q95_RS24250 () | 28913..30088 | - | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| G6Q95_RS24255 () | 30218..30937 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| G6Q95_RS24260 () | 30934..31368 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| G6Q95_RS24265 () | 31423..33381 | - | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| G6Q95_RS24270 () | 33440..33673 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| G6Q95_RS24275 () | 33731..34258 | - | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| G6Q95_RS25540 () | 34627..34695 | + | 69 | Protein_36 | pilus protein | - |
| G6Q95_RS24285 () | 35028..35219 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| G6Q95_RS24290 () | 35216..35638 | - | 423 | WP_000271725.1 | DUF1380 family protein | - |
| G6Q95_RS24295 () | 35685..35987 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| G6Q95_RS24305 () | 36528..37298 | - | 771 | WP_024133193.1 | hypothetical protein | - |
| G6Q95_RS24310 () | 37349..37783 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| G6Q95_RS24315 () | 37795..38016 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| G6Q95_RS24320 () | 38017..38700 | - | 684 | WP_000086178.1 | DNA methylase | - |
| G6Q95_RS24325 () | 38777..39088 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| G6Q95_RS24330 () | 39085..39987 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| G6Q95_RS24335 () | 40405..40653 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| G6Q95_RS24340 () | 40650..41087 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| G6Q95_RS24345 () | 41087..42361 | + | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| G6Q95_RS24350 () | 42363..42779 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| G6Q95_RS24355 () | 42772..43752 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| G6Q95_RS24360 () | 44166..44474 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| G6Q95_RS24365 () | 44561..45205 | - | 645 | WP_001144036.1 | ParA family protein | - |
| G6Q95_RS24370 () | 45385..46191 | - | 807 | WP_000016969.1 | site-specific integrase | - |
| G6Q95_RS24375 () | 46192..46497 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| G6Q95_RS24380 () | 46499..46717 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| G6Q95_RS24385 () | 47275..48201 | + | 927 | WP_001290416.1 | hypothetical protein | - |
| G6Q95_RS24390 () | 48246..48500 | + | 255 | WP_000678527.1 | hypothetical protein | - |
| G6Q95_RS24395 () | 48999..49343 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| G6Q95_RS24400 () | 49519..50520 | - | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| G6Q95_RS24405 () | 50872..51126 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| G6Q95_RS24410 () | 51126..51716 | + | 591 | WP_000194550.1 | hypothetical protein | - |
| G6Q95_RS24415 () | 51734..52081 | - | 348 | WP_000142436.1 | hypothetical protein | - |
| G6Q95_RS24420 () | 52200..52547 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| G6Q95_RS24425 () | 52565..54445 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| G6Q95_RS24430 () | 54724..55194 | - | 471 | Protein_65 | hypothetical protein | - |
| G6Q95_RS24435 () | 55246..55563 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| G6Q95_RS24440 () | 55560..56093 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| G6Q95_RS24445 () | 56187..57332 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| G6Q95_RS24450 () | 57656..57823 | - | 168 | Protein_69 | transposase | - |
| G6Q95_RS24455 () | 57940..58128 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| G6Q95_RS24460 () | 58138..59337 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| G6Q95_RS24465 () | 59509..59661 | - | 153 | Protein_72 | 3'-5' exonuclease | - |
| G6Q95_RS24470 () | 59701..59982 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G6Q95_RS24475 () | 59979..60248 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| G6Q95_RS24480 () | 60303..60461 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| G6Q95_RS24485 () | 61157..62188 | - | 1032 | WP_000907873.1 | replication initiation protein | - |
| G6Q95_RS24490 () | 63161..63424 | + | 264 | WP_001324596.1 | ash family protein | - |
| G6Q95_RS24495 () | 63342..63629 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| G6Q95_RS24500 () | 64071..64604 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| G6Q95_RS24505 () | 64858..65541 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| G6Q95_RS24510 () | 65555..66121 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| G6Q95_RS24515 () | 66389..66643 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| G6Q95_RS24520 () | 66686..67138 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| G6Q95_RS24525 () | 67812..68879 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| G6Q95_RS24530 () | 68879..69316 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| G6Q95_RS24535 () | 69330..71012 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| G6Q95_RS24540 () | 71005..72300 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| G6Q95_RS24545 () | 72287..72739 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| G6Q95_RS24550 () | 72750..74303 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| G6Q95_RS24555 () | 74316..75413 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| G6Q95_RS24560 () | 75431..76045 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| G6Q95_RS24565 () | 76055..76615 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| G6Q95_RS24570 () | 76600..77256 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| G6Q95_RS24575 () | 77256..78548 | + | 1293 | WP_032274560.1 | hypothetical protein | VF |
| G6Q95_RS24580 () | 78545..78793 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| G6Q95_RS24585 () | 79484..80638 | + | 1155 | WP_001139958.1 | integrase | - |
| G6Q95_RS24590 () | 80789..81613 | + | 825 | WP_001238927.1 | hypothetical protein | - |
| G6Q95_RS24595 () | 81699..82901 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| G6Q95_RS24600 () | 82961..83545 | + | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| G6Q95_RS24605 () | 83940..84398 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| G6Q95_RS24610 () | 84395..85213 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| G6Q95_RS24615 () | 85210..86358 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| G6Q95_RS24620 () | 86355..86645 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| G6Q95_RS24625 () | 86660..87211 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| G6Q95_RS24630 () | 87301..91068 | + | 3768 | WP_001141535.1 | hypothetical protein | - |
| G6Q95_RS24635 () | 91086..91433 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| G6Q95_RS24640 () | 91430..92122 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| G6Q95_RS24645 () | 92133..93116 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| G6Q95_RS24650 () | 93119..94408 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|